EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCHIG00000008450 (Gene tree)
Gene ID
102185996
Gene Symbol
AFF1
Alias
AF-4|AF4|MLLT2|PBM1
Full Name
AF4/FMR2 family member 1
Gene Type
protein_coding
Species
Capra_hircus
Status
putative
Strand
Plus strand
Length
194754 bases
Position
chr6:102296512-102491265
Accession
102185996
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCHIP00000004273AF-4PF05110.13011
ENSCHIP00000004242AF-4PF05110.13011
ENSCHIP00000004251AF-4PF05110.13012
ENSCHIP00000004251AF-4PF05110.13022
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCHIT00000011644AFF1-2023872XM_018049705ENSCHIP000000042511198 (aa)XP_017905194UPI000D192C49
ENSCHIT00000011672AFF1-2034202XM_018049703ENSCHIP000000042731220 (aa)XP_017905192UPI0008472E32
ENSCHIT00000011632AFF1-2013959XM_018049701ENSCHIP000000042421227 (aa)XP_017905190UPI0008472F7E
Gene Model
Click here to download ENSCHIG00000008450's gene model file
Pathways
Pathway IDPathway NameSource
chx05202Transcriptional misregulation in cancerKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000008450's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCHIG00000008450AFF110080.403ENSG00000172493AFF19986.441Homo_sapiens
ENSCHIG00000008450AFF18742.322ENSG00000155966AFF25941.573Homo_sapiens
ENSCHIG00000008450AFF110080.464ENSAMEG00000003337AFF110080.517Ailuropoda_melanoleuca
ENSCHIG00000008450AFF15931.275ENSACIG00000010525aff49031.308Amphilophus_citrinellus
ENSCHIG00000008450AFF17635.533ENSAOCG00000008476aff45933.516Amphiprion_ocellaris
ENSCHIG00000008450AFF17635.838ENSAPEG00000018275aff45933.516Amphiprion_percula
ENSCHIG00000008450AFF15639.100ENSATEG00000015552-5938.558Anabas_testudineus
ENSCHIG00000008450AFF17736.623ENSATEG00000010963aff45933.561Anabas_testudineus
ENSCHIG00000008450AFF15643.223ENSAPLG00000003660-6947.059Anas_platyrhynchos
ENSCHIG00000008450AFF19953.889ENSAPLG00000004059AFF15850.551Anas_platyrhynchos
ENSCHIG00000008450AFF19937.310ENSACAG00000022605AFF45933.880Anolis_carolinensis
ENSCHIG00000008450AFF19951.677ENSACAG00000012192AFF15850.698Anolis_carolinensis
ENSCHIG00000008450AFF110078.687ENSANAG00000017095AFF110079.011Aotus_nancymaae
ENSCHIG00000008450AFF18742.697ENSANAG00000023509AFF25941.948Aotus_nancymaae
ENSCHIG00000008450AFF17136.111ENSACLG00000002905-6138.390Astatotilapia_calliptera
ENSCHIG00000008450AFF17159.701ENSAMXG00000020137aff46461.644Astyanax_mexicanus
ENSCHIG00000008450AFF110097.396ENSBTAG00000018488AFF110097.396Bos_taurus
ENSCHIG00000008450AFF18742.322ENSCJAG00000000061AFF26341.573Callithrix_jacchus
ENSCHIG00000008450AFF110077.553ENSCJAG00000006047AFF110077.877Callithrix_jacchus
ENSCHIG00000008450AFF110081.619ENSCAFG00000009476AFF110081.457Canis_familiaris
ENSCHIG00000008450AFF16773.430ENSTSYG00000002039AFF110072.947Carlito_syrichta
ENSCHIG00000008450AFF19958.049ENSCAPG00000006540AFF15959.637Cavia_aperea
ENSCHIG00000008450AFF19181.728ENSCCAG00000027623AFF19982.963Cebus_capucinus
ENSCHIG00000008450AFF18742.697ENSCCAG00000025994AFF25941.948Cebus_capucinus
ENSCHIG00000008450AFF110080.161ENSCATG00000039501AFF110079.839Cercocebus_atys
ENSCHIG00000008450AFF18742.322ENSCATG00000040342AFF26141.573Cercocebus_atys
ENSCHIG00000008450AFF16559.459ENSCLAG00000017100AFF38159.459Chinchilla_lanigera
ENSCHIG00000008450AFF110065.517ENSCLAG00000005537AFF110065.036Chinchilla_lanigera
ENSCHIG00000008450AFF110080.130ENSCSAG00000004333AFF110079.805Chlorocebus_sabaeus
ENSCHIG00000008450AFF15050.606ENSCHOG00000003138AFF45941.723Choloepus_hoffmanni
ENSCHIG00000008450AFF17781.159ENSCHOG00000000041AFF17580.311Choloepus_hoffmanni
ENSCHIG00000008450AFF110057.520ENSCPBG00000005382AFF110057.520Chrysemys_picta_bellii
ENSCHIG00000008450AFF16643.071ENSCPBG00000020831AFF25446.840Chrysemys_picta_bellii
ENSCHIG00000008450AFF18742.322ENSCANG00000029116AFF26241.573Colobus_angolensis_palliatus
ENSCHIG00000008450AFF110079.630ENSCANG00000037514AFF110079.308Colobus_angolensis_palliatus
ENSCHIG00000008450AFF17163.363ENSCGRG00000004837Aff18563.587Cricetulus_griseus_crigri
ENSCHIG00000008450AFF16461.194ENSCSEG00000017002aff46134.066Cynoglossus_semilaevis
ENSCHIG00000008450AFF18361.111ENSDARG00000001857aff46661.111Danio_rerio
ENSCHIG00000008450AFF17178.912ENSDNOG00000048783-8177.437Dasypus_novemcinctus
ENSCHIG00000008450AFF19972.422ENSDORG00000013881Aff15871.849Dipodomys_ordii
ENSCHIG00000008450AFF15558.108ENSDORG00000007294Aff37756.962Dipodomys_ordii
ENSCHIG00000008450AFF19486.905ENSETEG00000014905AFF19375.638Echinops_telfairi
ENSCHIG00000008450AFF15751.327ENSETEG00000002756AFF25852.212Echinops_telfairi
ENSCHIG00000008450AFF110081.490ENSEASG00005012760AFF110080.529Equus_asinus_asinus
ENSCHIG00000008450AFF18636.330ENSEASG00005013954AFF25249.412Equus_asinus_asinus
ENSCHIG00000008450AFF16859.459ENSECAG00000006249AFF35859.459Equus_caballus
ENSCHIG00000008450AFF110081.170ENSECAG00000003619AFF110080.886Equus_caballus
ENSCHIG00000008450AFF17492.500ENSEEUG00000013664-7492.500Erinaceus_europaeus
ENSCHIG00000008450AFF18262.500ENSELUG00000023871aff46761.972Esox_lucius
ENSCHIG00000008450AFF19947.736ENSFALG00000005554AFF15746.648Ficedula_albicollis
ENSCHIG00000008450AFF110066.586ENSFDAG00000018846AFF110066.100Fukomys_damarensis
ENSCHIG00000008450AFF18553.425ENSGALG00000009168AFF25542.581Gallus_gallus
ENSCHIG00000008450AFF110048.957ENSGALG00000043935AFF16146.732Gallus_gallus
ENSCHIG00000008450AFF18260.274ENSGAFG00000005288aff46459.091Gambusia_affinis
ENSCHIG00000008450AFF17737.412ENSGACG00000020734aff45934.150Gasterosteus_aculeatus
ENSCHIG00000008450AFF19931.873ENSGACG00000016333-10036.207Gasterosteus_aculeatus
ENSCHIG00000008450AFF17740.557ENSGAGG00000020214AFF45933.838Gopherus_agassizii
ENSCHIG00000008450AFF15931.707ENSGAGG00000024801-8931.145Gopherus_agassizii
ENSCHIG00000008450AFF18742.322ENSGGOG00000010543AFF25941.573Gorilla_gorilla
ENSCHIG00000008450AFF110079.694ENSGGOG00000008497AFF110079.580Gorilla_gorilla
ENSCHIG00000008450AFF17136.111ENSHBUG00000005828-6138.390Haplochromis_burtoni
ENSCHIG00000008450AFF110066.774ENSHGLG00000001384AFF110066.774Heterocephalus_glaber_female
ENSCHIG00000008450AFF17260.606ENSIPUG00000011689aff47660.606Ictalurus_punctatus
ENSCHIG00000008450AFF110080.308ENSSTOG00000006530AFF110079.855Ictidomys_tridecemlineatus
ENSCHIG00000008450AFF17640.189ENSJJAG00000000912Aff46035.047Jaculus_jaculus
ENSCHIG00000008450AFF16559.459ENSJJAG00000013155Aff37460.000Jaculus_jaculus
ENSCHIG00000008450AFF19970.096ENSJJAG00000022877Aff15969.494Jaculus_jaculus
ENSCHIG00000008450AFF17634.650ENSKMAG00000010443aff45932.889Kryptolebias_marmoratus
ENSCHIG00000008450AFF17635.174ENSLBEG00000017778aff45933.562Labrus_bergylta
ENSCHIG00000008450AFF17138.444ENSLBEG00000016928-5539.615Labrus_bergylta
ENSCHIG00000008450AFF19948.608ENSLACG00000007303AFF15845.205Latimeria_chalumnae
ENSCHIG00000008450AFF17072.727ENSLOCG00000004025AFF16336.986Lepisosteus_oculatus
ENSCHIG00000008450AFF17751.948ENSLOCG00000015403aff25251.948Lepisosteus_oculatus
ENSCHIG00000008450AFF17737.589ENSLOCG00000010610aff45834.422Lepisosteus_oculatus
ENSCHIG00000008450AFF18942.322ENSLAFG00000018691AFF28839.189Loxodonta_africana
ENSCHIG00000008450AFF110080.242ENSMFAG00000037700AFF110079.919Macaca_fascicularis
ENSCHIG00000008450AFF18742.322ENSMFAG00000044807AFF26041.573Macaca_fascicularis
ENSCHIG00000008450AFF110080.130ENSMMUG00000014076AFF19885.301Macaca_mulatta
ENSCHIG00000008450AFF18742.322ENSMMUG00000000466AFF26041.573Macaca_mulatta
ENSCHIG00000008450AFF18742.322ENSMNEG00000035909AFF25941.573Macaca_nemestrina
ENSCHIG00000008450AFF110080.242ENSMNEG00000031536AFF110079.919Macaca_nemestrina
ENSCHIG00000008450AFF110080.242ENSMLEG00000039099AFF110079.919Mandrillus_leucophaeus
ENSCHIG00000008450AFF18742.322ENSMLEG00000038832AFF26141.573Mandrillus_leucophaeus
ENSCHIG00000008450AFF17738.008ENSMAMG00000021453aff45834.150Mastacembelus_armatus
ENSCHIG00000008450AFF19240.807ENSMAMG00000016189-5841.577Mastacembelus_armatus
ENSCHIG00000008450AFF17136.111ENSMZEG00005020442-6138.390Maylandia_zebra
ENSCHIG00000008450AFF15935.849ENSMGAG00000008246-9235.165Meleagris_gallopavo
ENSCHIG00000008450AFF19948.571ENSMGAG00000007646AFF15746.540Meleagris_gallopavo
ENSCHIG00000008450AFF19966.800ENSMAUG00000010241Aff15963.229Mesocricetus_auratus
ENSCHIG00000008450AFF17743.243ENSMAUG00000013669Aff47943.243Mesocricetus_auratus
ENSCHIG00000008450AFF16562.500ENSMMOG00000013763aff46662.500Mola_mola
ENSCHIG00000008450AFF19956.947ENSMODG00000020745AFF15654.190Monodelphis_domestica
ENSCHIG00000008450AFF15142.775ENSMODG00000027810-5559.091Monodelphis_domestica
ENSCHIG00000008450AFF17639.244MGP_CAROLIEiJ_G0016331Aff46056.164Mus_caroli
ENSCHIG00000008450AFF110064.439MGP_CAROLIEiJ_G0027469Aff110065.314Mus_caroli
ENSCHIG00000008450AFF18742.697MGP_CAROLIEiJ_G0033123Aff25041.948Mus_caroli
ENSCHIG00000008450AFF17639.099ENSMUSG00000049470Aff46056.164Mus_musculus
ENSCHIG00000008450AFF16556.757ENSMUSG00000037138Aff36655.696Mus_musculus
ENSCHIG00000008450AFF17639.312MGP_PahariEiJ_G0017466Aff46056.164Mus_pahari
ENSCHIG00000008450AFF16635.165MGP_PahariEiJ_G0027310Aff35146.792Mus_pahari
ENSCHIG00000008450AFF17639.099MGP_SPRETEiJ_G0017175Aff46056.164Mus_spretus
ENSCHIG00000008450AFF110065.842MGP_SPRETEiJ_G0028466Aff110065.443Mus_spretus
ENSCHIG00000008450AFF110080.466ENSMPUG00000002270AFF110079.036Mustela_putorius_furo
ENSCHIG00000008450AFF19978.785ENSMLUG00000000293AFF110077.247Myotis_lucifugus
ENSCHIG00000008450AFF17639.979ENSNGAG00000019867Aff46034.388Nannospalax_galili
ENSCHIG00000008450AFF18742.322ENSNLEG00000013346AFF26041.573Nomascus_leucogenys
ENSCHIG00000008450AFF19976.568ENSNLEG00000009429AFF15976.397Nomascus_leucogenys
ENSCHIG00000008450AFF18951.226ENSMEUG00000003076-9150.771Notamacropus_eugenii
ENSCHIG00000008450AFF17733.202ENSMEUG00000014599AFF25731.150Notamacropus_eugenii
ENSCHIG00000008450AFF110071.486ENSOPRG00000017154-10071.890Ochotona_princeps
ENSCHIG00000008450AFF16756.098ENSOPRG00000014519AFF46167.089Ochotona_princeps
ENSCHIG00000008450AFF110058.173ENSOANG00000013624AFF16058.033Ornithorhynchus_anatinus
ENSCHIG00000008450AFF15543.071ENSOANG00000001095-6546.840Ornithorhynchus_anatinus
ENSCHIG00000008450AFF110075.990ENSOCUG00000002105AFF19775.667Oryctolagus_cuniculus
ENSCHIG00000008450AFF17735.971ENSORLG00000001361aff45933.425Oryzias_latipes
ENSCHIG00000008450AFF17735.971ENSORLG00020020601aff45933.425Oryzias_latipes_hni
ENSCHIG00000008450AFF17735.839ENSORLG00015004684aff45933.425Oryzias_latipes_hsok
ENSCHIG00000008450AFF17736.354ENSOMEG00000005078aff45933.702Oryzias_melastigma
ENSCHIG00000008450AFF16963.270ENSOGAG00000031211-8360.644Otolemur_garnettii
ENSCHIG00000008450AFF19997.783ENSOARG00000004522AFF110097.783Ovis_aries
ENSCHIG00000008450AFF110080.161ENSPPAG00000029196AFF110080.291Pan_paniscus
ENSCHIG00000008450AFF18742.322ENSPPAG00000040251AFF25541.573Pan_paniscus
ENSCHIG00000008450AFF18382.430ENSPTIG00000011838AFF19083.066Panthera_tigris_altaica
ENSCHIG00000008450AFF15642.697ENSPTIG00000018890AFF26141.948Panthera_tigris_altaica
ENSCHIG00000008450AFF18742.322ENSPTRG00000022353AFF25941.573Pan_troglodytes
ENSCHIG00000008450AFF110080.161ENSPTRG00000016255AFF110086.316Pan_troglodytes
ENSCHIG00000008450AFF16647.688ENSPTRG00000046486-9239.909Pan_troglodytes
ENSCHIG00000008450AFF18742.322ENSPANG00000002926AFF26341.573Papio_anubis
ENSCHIG00000008450AFF19876.752ENSPANG00000016722AFF15875.323Papio_anubis
ENSCHIG00000008450AFF16456.061ENSPKIG00000024325AFF46656.061Paramormyrops_kingsleyae
ENSCHIG00000008450AFF18256.338ENSPKIG00000024249AFF46459.091Paramormyrops_kingsleyae
ENSCHIG00000008450AFF17739.917ENSPSIG00000013003AFF45833.609Pelodiscus_sinensis
ENSCHIG00000008450AFF110054.137ENSPSIG00000003759AFF15952.770Pelodiscus_sinensis
ENSCHIG00000008450AFF17235.648ENSPSIG00000010309AFF27145.926Pelodiscus_sinensis
ENSCHIG00000008450AFF15933.605ENSPMGG00000006477aff49932.409Periophthalmus_magnuspinnatus
ENSCHIG00000008450AFF17155.405ENSPEMG00000014802Aff37456.000Peromyscus_maniculatus_bairdii
ENSCHIG00000008450AFF110063.911ENSPEMG00000000785Aff15863.501Peromyscus_maniculatus_bairdii
ENSCHIG00000008450AFF19479.032ENSPCIG00000011395AFF19957.154Phascolarctos_cinereus
ENSCHIG00000008450AFF15039.405ENSPFOG00000004524aff27343.820Poecilia_formosa
ENSCHIG00000008450AFF15561.194ENSPFOG00000004581-5761.290Poecilia_formosa
ENSCHIG00000008450AFF15777.500ENSPLAG00000005101aff26876.190Poecilia_latipinna
ENSCHIG00000008450AFF110077.805ENSPPYG00000014910AFF110077.480Pongo_abelii
ENSCHIG00000008450AFF17754.667ENSPCAG00000003995AFF47437.640Procavia_capensis
ENSCHIG00000008450AFF17591.304ENSPCAG00000005658AFF17491.304Procavia_capensis
ENSCHIG00000008450AFF15555.000ENSPCAG00000015472AFF25355.000Procavia_capensis
ENSCHIG00000008450AFF18742.322ENSPCOG00000013963AFF26041.573Propithecus_coquereli
ENSCHIG00000008450AFF19582.101ENSPVAG00000014455AFF17982.101Pteropus_vampyrus
ENSCHIG00000008450AFF16544.091ENSPVAG00000006065AFF25143.182Pteropus_vampyrus
ENSCHIG00000008450AFF15540.385ENSPNAG00000005945aff29235.092Pygocentrus_nattereri
ENSCHIG00000008450AFF18237.372ENSRNOG00000018830Aff35146.642Rattus_norvegicus
ENSCHIG00000008450AFF15642.322ENSRBIG00000035160AFF26341.573Rhinopithecus_bieti
ENSCHIG00000008450AFF110079.643ENSRBIG00000032242AFF110079.319Rhinopithecus_bieti
ENSCHIG00000008450AFF15642.322ENSRROG00000044189AFF26341.573Rhinopithecus_roxellana
ENSCHIG00000008450AFF110079.724ENSRROG00000045716AFF110079.400Rhinopithecus_roxellana
ENSCHIG00000008450AFF18742.697ENSSBOG00000020604AFF25941.948Saimiri_boliviensis_boliviensis
ENSCHIG00000008450AFF110077.868ENSSBOG00000035401AFF110078.409Saimiri_boliviensis_boliviensis
ENSCHIG00000008450AFF19957.958ENSSHAG00000004203AFF19957.568Sarcophilus_harrisii
ENSCHIG00000008450AFF15932.153ENSSHAG00000009556AFF29931.675Sarcophilus_harrisii
ENSCHIG00000008450AFF17740.560ENSSHAG00000013198AFF46033.700Sarcophilus_harrisii
ENSCHIG00000008450AFF18359.155ENSSFOG00015018646aff46558.904Scleropages_formosus
ENSCHIG00000008450AFF18136.424ENSSFOG00015004020aff28035.825Scleropages_formosus
ENSCHIG00000008450AFF16241.453ENSSFOG00015009105-5844.144Scleropages_formosus
ENSCHIG00000008450AFF16035.153ENSSFOG00015000846AFF48934.328Scleropages_formosus
ENSCHIG00000008450AFF18362.500ENSSMAG00000004734aff46762.500Scophthalmus_maximus
ENSCHIG00000008450AFF19133.607ENSSMAG00000007062-9336.829Scophthalmus_maximus
ENSCHIG00000008450AFF18362.500ENSSDUG00000019498aff48561.538Seriola_dumerili
ENSCHIG00000008450AFF15553.602ENSSARG00000013296-7753.602Sorex_araneus
ENSCHIG00000008450AFF19955.370ENSSPUG00000001574AFF15754.696Sphenodon_punctatus
ENSCHIG00000008450AFF15930.968ENSSPUG00000009604AFF39130.537Sphenodon_punctatus
ENSCHIG00000008450AFF17738.946ENSSPUG00000012215AFF46034.069Sphenodon_punctatus
ENSCHIG00000008450AFF16635.636ENSSPAG00000012370aff48834.200Stegastes_partitus
ENSCHIG00000008450AFF15982.725ENSSSCG00000023593AFF16183.310Sus_scrofa
ENSCHIG00000008450AFF19948.521ENSTGUG00000002726AFF110047.255Taeniopygia_guttata
ENSCHIG00000008450AFF15332.532ENSTGUG00000010075-9932.525Taeniopygia_guttata
ENSCHIG00000008450AFF18356.164ENSTNIG00000018201aff46035.081Tetraodon_nigroviridis
ENSCHIG00000008450AFF19976.245ENSTBEG00000007536AFF110075.918Tupaia_belangeri
ENSCHIG00000008450AFF110087.980ENSTTRG00000005595AFF110088.480Tursiops_truncatus
ENSCHIG00000008450AFF18180.396ENSUAMG00000001919AFF19979.901Ursus_americanus
ENSCHIG00000008450AFF110067.794ENSUMAG00000025433AFF18779.284Ursus_maritimus
ENSCHIG00000008450AFF18742.697ENSUMAG00000009395AFF25545.833Ursus_maritimus
ENSCHIG00000008450AFF110079.673ENSVPAG00000004007AFF15880.845Vicugna_pacos
ENSCHIG00000008450AFF110081.577ENSVVUG00000009263AFF110081.416Vulpes_vulpes
ENSCHIG00000008450AFF18943.019ENSXETG00000019630aff27043.019Xenopus_tropicalis
ENSCHIG00000008450AFF19943.670ENSXETG00000019955aff15941.770Xenopus_tropicalis
ENSCHIG00000008450AFF18258.108ENSXMAG00000001642aff46459.459Xiphophorus_maculatus

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