EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000009008 (Gene tree)
Gene ID: 100861038
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 4195 bases
Position: chr25:35488221-35492415
Accession: 100861038
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000004878	RNA_pol_L_2	PF13656.6	3.5e-29	1	1
ENSCHIP00000004881	RNA_pol_L_2	PF13656.6	5.3e-29	1	1
ENSCHIP00000004878	RNA_pol_L	PF01193.24	3.9e-10	1	1
ENSCHIP00000004881	RNA_pol_L	PF01193.24	6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000012421	-	411	-	ENSCHIP00000004881	136 (aa)	-	UPI000D18C25C
ENSCHIT00000012416	-	354	XM_005697804	ENSCHIP00000004878	117 (aa)	XP_005697861	UPI000000B2C2

Gene Model

Click here to download ENSCHIG00000009008's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03020	RNA polymerase	KEGG
chx05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000009008's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000009008	-	85	33.010	ENSCHIG00000021910	POLR1D	77	33.010

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000009008	-	100	92.126	ENSANAG00000020385	-	100	92.126	Aotus_nancymaae
ENSCHIG00000009008	-	100	100.000	ENSBTAG00000005446	POLR2J	100	100.000	Bos_taurus
ENSCHIG00000009008	-	100	100.000	ENSCAFG00020013154	-	100	100.000	Canis_lupus_dingo
ENSCHIG00000009008	-	96	91.964	ENSCAPG00000013625	-	96	91.964	Cavia_aperea
ENSCHIG00000009008	-	100	100.000	ENSCCAG00000029378	-	100	100.000	Cebus_capucinus
ENSCHIG00000009008	-	50	100.000	ENSCHOG00000008325	-	55	100.000	Choloepus_hoffmanni
ENSCHIG00000009008	-	85	99.000	ENSCPBG00000027774	-	84	99.000	Chrysemys_picta_bellii
ENSCHIG00000009008	-	100	100.000	ENSECAG00000022750	-	100	100.000	Equus_caballus
ENSCHIG00000009008	-	77	97.778	ENSGGOG00000038950	-	57	93.939	Gorilla_gorilla
ENSCHIG00000009008	-	96	55.357	ENSGGOG00000043186	-	86	55.357	Gorilla_gorilla
ENSCHIG00000009008	-	50	94.915	ENSGGOG00000003934	-	85	84.722	Gorilla_gorilla
ENSCHIG00000009008	-	54	92.063	ENSLACG00000022567	-	60	92.063	Latimeria_chalumnae
ENSCHIG00000009008	-	91	99.065	ENSMFAG00000039168	-	92	100.000	Macaca_fascicularis
ENSCHIG00000009008	-	100	100.000	ENSMLEG00000033262	-	100	100.000	Mandrillus_leucophaeus
ENSCHIG00000009008	-	100	100.000	ENSMICG00000010323	-	100	100.000	Microcebus_murinus
ENSCHIG00000009008	-	91	74.766	ENSPTRG00000050290	-	93	72.477	Pan_troglodytes
ENSCHIG00000009008	-	59	85.507	ENSPTRG00000028611	-	60	91.045	Pan_troglodytes
ENSCHIG00000009008	-	77	72.222	ENSPTRG00000052689	-	63	70.707	Pan_troglodytes
ENSCHIG00000009008	-	100	100.000	ENSPTRG00000019132	-	100	100.000	Pan_troglodytes
ENSCHIG00000009008	-	100	80.342	ENSPANG00000015179	-	100	80.342	Papio_anubis
ENSCHIG00000009008	-	100	96.581	ENSPKIG00000013014	-	100	96.581	Paramormyrops_kingsleyae
ENSCHIG00000009008	-	92	99.074	ENSPCAG00000003269	-	65	97.391	Procavia_capensis
ENSCHIG00000009008	-	100	100.000	ENSRBIG00000042413	-	100	100.000	Rhinopithecus_bieti
ENSCHIG00000009008	-	98	93.043	ENSRROG00000035578	-	96	99.065	Rhinopithecus_roxellana
ENSCHIG00000009008	-	76	100.000	ENSTTRG00000014846	-	70	93.878	Tursiops_truncatus
ENSCHIG00000009008	-	91	73.832	ENSVPAG00000007077	-	61	74.074	Vicugna_pacos
ENSCHIG00000009008	-	100	100.000	ENSVVUG00000023727	-	100	100.000	Vulpes_vulpes