EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000009107 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 7689 bases
Position: chr8:70213312-70221000
Accession: 102181123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000004978	R3H	PF01424.22	4.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000012542	R3HCC1-201	1329	XM_018052332	ENSCHIP00000004978	442 (aa)	XP_017907821	UPI000D195F52

Gene Model

Click here to download ENSCHIG00000009107's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000009107's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000009107	R3HCC1	99	71.744	ENSG00000104679	R3HCC1	100	93.023	Homo_sapiens
ENSCHIG00000009107	R3HCC1	100	72.926	ENSAMEG00000002963	R3HCC1	92	72.707	Ailuropoda_melanoleuca
ENSCHIG00000009107	R3HCC1	97	31.624	ENSACIG00000017144	r3hcc1	99	30.316	Amphilophus_citrinellus
ENSCHIG00000009107	R3HCC1	93	31.690	ENSAPEG00000003613	r3hcc1	97	34.192	Amphiprion_percula
ENSCHIG00000009107	R3HCC1	96	46.102	ENSACAG00000016627	R3HCC1	95	46.512	Anolis_carolinensis
ENSCHIG00000009107	R3HCC1	99	73.951	ENSANAG00000036169	R3HCC1	94	73.951	Aotus_nancymaae
ENSCHIG00000009107	R3HCC1	100	88.210	ENSBTAG00000025830	R3HCC1	97	88.210	Bos_taurus
ENSCHIG00000009107	R3HCC1	99	72.406	ENSCJAG00000020118	R3HCC1	99	64.680	Callithrix_jacchus
ENSCHIG00000009107	R3HCC1	100	69.651	ENSCAFG00000009210	R3HCC1	96	70.306	Canis_familiaris
ENSCHIG00000009107	R3HCC1	83	67.448	ENSCAFG00020012870	R3HCC1	86	67.188	Canis_lupus_dingo
ENSCHIG00000009107	R3HCC1	99	72.406	ENSTSYG00000000511	R3HCC1	77	72.406	Carlito_syrichta
ENSCHIG00000009107	R3HCC1	88	57.798	ENSCAPG00000015813	R3HCC1	99	57.604	Cavia_aperea
ENSCHIG00000009107	R3HCC1	98	64.644	ENSCPOG00000009696	R3HCC1	99	64.496	Cavia_porcellus
ENSCHIG00000009107	R3HCC1	99	72.406	ENSCCAG00000037811	R3HCC1	99	65.563	Cebus_capucinus
ENSCHIG00000009107	R3HCC1	99	71.523	ENSCATG00000032971	R3HCC1	99	65.121	Cercocebus_atys
ENSCHIG00000009107	R3HCC1	98	66.592	ENSCLAG00000015556	R3HCC1	83	66.815	Chinchilla_lanigera
ENSCHIG00000009107	R3HCC1	99	71.302	ENSCSAG00000016250	R3HCC1	91	72.185	Chlorocebus_sabaeus
ENSCHIG00000009107	R3HCC1	98	69.824	ENSCHOG00000000396	R3HCC1	95	69.824	Choloepus_hoffmanni
ENSCHIG00000009107	R3HCC1	99	72.406	ENSCANG00000029441	R3HCC1	99	65.121	Colobus_angolensis_palliatus
ENSCHIG00000009107	R3HCC1	99	61.392	ENSCGRG00001014977	R3hcc1	99	61.392	Cricetulus_griseus_chok1gshd
ENSCHIG00000009107	R3HCC1	99	61.392	ENSCGRG00000004454	R3hcc1	99	61.392	Cricetulus_griseus_crigri
ENSCHIG00000009107	R3HCC1	95	32.522	ENSCSEG00000005748	r3hcc1	99	31.072	Cynoglossus_semilaevis
ENSCHIG00000009107	R3HCC1	81	31.662	ENSCVAG00000002640	r3hcc1	95	30.871	Cyprinodon_variegatus
ENSCHIG00000009107	R3HCC1	96	32.719	ENSDARG00000099593	r3hcc1	98	32.949	Danio_rerio
ENSCHIG00000009107	R3HCC1	99	71.806	ENSDNOG00000007168	R3HCC1	91	71.806	Dasypus_novemcinctus
ENSCHIG00000009107	R3HCC1	98	62.090	ENSDORG00000026365	R3hcc1	98	61.270	Dipodomys_ordii
ENSCHIG00000009107	R3HCC1	98	63.053	ENSETEG00000001147	R3HCC1	96	62.528	Echinops_telfairi
ENSCHIG00000009107	R3HCC1	100	76.471	ENSEASG00005018782	R3HCC1	81	76.471	Equus_asinus_asinus
ENSCHIG00000009107	R3HCC1	100	76.035	ENSECAG00000025013	R3HCC1	98	76.035	Equus_caballus
ENSCHIG00000009107	R3HCC1	98	68.889	ENSEEUG00000011918	R3HCC1	95	68.667	Erinaceus_europaeus
ENSCHIG00000009107	R3HCC1	93	37.500	ENSELUG00000023650	r3hcc1	99	37.500	Esox_lucius
ENSCHIG00000009107	R3HCC1	100	72.271	ENSFCAG00000012395	R3HCC1	97	72.707	Felis_catus
ENSCHIG00000009107	R3HCC1	98	64.912	ENSFDAG00000001572	R3HCC1	98	64.912	Fukomys_damarensis
ENSCHIG00000009107	R3HCC1	60	36.620	ENSGMOG00000017590	-	77	36.620	Gadus_morhua
ENSCHIG00000009107	R3HCC1	97	35.747	ENSGAFG00000008747	-	91	36.049	Gambusia_affinis
ENSCHIG00000009107	R3HCC1	96	32.273	ENSGACG00000008447	r3hcc1	95	32.273	Gasterosteus_aculeatus
ENSCHIG00000009107	R3HCC1	99	70.640	ENSGGOG00000013817	R3HCC1	99	71.523	Gorilla_gorilla
ENSCHIG00000009107	R3HCC1	98	64.465	ENSHGLG00000010517	R3HCC1	91	65.479	Heterocephalus_glaber_female
ENSCHIG00000009107	R3HCC1	98	64.465	ENSHGLG00100006388	R3HCC1	91	65.479	Heterocephalus_glaber_male
ENSCHIG00000009107	R3HCC1	62	47.692	ENSHCOG00000011745	r3hcc1	67	47.059	Hippocampus_comes
ENSCHIG00000009107	R3HCC1	97	35.991	ENSIPUG00000024504	r3hcc1	87	34.339	Ictalurus_punctatus
ENSCHIG00000009107	R3HCC1	99	62.009	ENSSTOG00000027130	R3HCC1	95	62.009	Ictidomys_tridecemlineatus
ENSCHIG00000009107	R3HCC1	100	63.753	ENSJJAG00000013075	R3hcc1	100	62.422	Jaculus_jaculus
ENSCHIG00000009107	R3HCC1	92	32.688	ENSKMAG00000000286	r3hcc1	98	33.571	Kryptolebias_marmoratus
ENSCHIG00000009107	R3HCC1	97	39.648	ENSLACG00000011894	R3HCC1	66	50.993	Latimeria_chalumnae
ENSCHIG00000009107	R3HCC1	97	34.537	ENSLOCG00000015442	r3hcc1	99	33.958	Lepisosteus_oculatus
ENSCHIG00000009107	R3HCC1	98	69.375	ENSLAFG00000016137	R3HCC1	95	69.167	Loxodonta_africana
ENSCHIG00000009107	R3HCC1	99	71.523	ENSMFAG00000032894	R3HCC1	99	65.121	Macaca_fascicularis
ENSCHIG00000009107	R3HCC1	99	71.744	ENSMMUG00000016655	R3HCC1	99	65.342	Macaca_mulatta
ENSCHIG00000009107	R3HCC1	99	71.965	ENSMNEG00000043283	R3HCC1	99	64.901	Macaca_nemestrina
ENSCHIG00000009107	R3HCC1	99	71.744	ENSMLEG00000030147	R3HCC1	99	65.342	Mandrillus_leucophaeus
ENSCHIG00000009107	R3HCC1	91	32.394	ENSMAMG00000018146	r3hcc1	98	34.597	Mastacembelus_armatus
ENSCHIG00000009107	R3HCC1	97	46.429	ENSMGAG00000001356	R3HCC1	90	46.429	Meleagris_gallopavo
ENSCHIG00000009107	R3HCC1	98	71.175	ENSMICG00000011146	R3HCC1	93	71.397	Microcebus_murinus
ENSCHIG00000009107	R3HCC1	97	49.210	ENSMODG00000016809	-	99	48.869	Monodelphis_domestica
ENSCHIG00000009107	R3HCC1	91	31.308	ENSMALG00000000731	r3hcc1	98	31.655	Monopterus_albus
ENSCHIG00000009107	R3HCC1	99	60.532	MGP_CAROLIEiJ_G0019467	R3hcc1	99	60.941	Mus_caroli
ENSCHIG00000009107	R3HCC1	99	60.204	ENSMUSG00000034194	R3hcc1	99	60.941	Mus_musculus
ENSCHIG00000009107	R3HCC1	99	57.422	MGP_PahariEiJ_G0030484	R3hcc1	99	57.576	Mus_pahari
ENSCHIG00000009107	R3HCC1	99	59.838	MGP_SPRETEiJ_G0020359	R3hcc1	99	60.569	Mus_spretus
ENSCHIG00000009107	R3HCC1	100	72.926	ENSMPUG00000003457	R3HCC1	87	72.707	Mustela_putorius_furo
ENSCHIG00000009107	R3HCC1	99	71.335	ENSMLUG00000000266	R3HCC1	91	72.588	Myotis_lucifugus
ENSCHIG00000009107	R3HCC1	98	66.960	ENSNGAG00000016747	R3hcc1	99	65.801	Nannospalax_galili
ENSCHIG00000009107	R3HCC1	90	71.186	ENSNLEG00000015944	R3HCC1	85	71.186	Nomascus_leucogenys
ENSCHIG00000009107	R3HCC1	99	55.408	ENSMEUG00000010587	R3HCC1	98	55.338	Notamacropus_eugenii
ENSCHIG00000009107	R3HCC1	99	63.535	ENSOPRG00000013390	R3HCC1	95	63.758	Ochotona_princeps
ENSCHIG00000009107	R3HCC1	98	62.733	ENSODEG00000007529	R3HCC1	99	63.299	Octodon_degus
ENSCHIG00000009107	R3HCC1	97	53.896	ENSOANG00000013877	R3HCC1	95	55.799	Ornithorhynchus_anatinus
ENSCHIG00000009107	R3HCC1	99	64.238	ENSOCUG00000023554	R3HCC1	85	64.989	Oryctolagus_cuniculus
ENSCHIG00000009107	R3HCC1	92	33.810	ENSORLG00000016816	r3hcc1	99	33.176	Oryzias_latipes
ENSCHIG00000009107	R3HCC1	92	34.524	ENSORLG00020012005	r3hcc1	99	33.879	Oryzias_latipes_hni
ENSCHIG00000009107	R3HCC1	92	33.645	ENSORLG00015007018	r3hcc1	99	32.794	Oryzias_latipes_hsok
ENSCHIG00000009107	R3HCC1	92	34.834	ENSOMEG00000000816	r3hcc1	99	32.558	Oryzias_melastigma
ENSCHIG00000009107	R3HCC1	99	67.325	ENSOGAG00000001291	R3HCC1	92	67.982	Otolemur_garnettii
ENSCHIG00000009107	R3HCC1	100	90.175	ENSOARG00000010146	R3HCC1	96	90.175	Ovis_aries
ENSCHIG00000009107	R3HCC1	99	70.640	ENSPPAG00000033165	R3HCC1	99	71.523	Pan_paniscus
ENSCHIG00000009107	R3HCC1	98	72.667	ENSPPRG00000002522	R3HCC1	99	73.111	Panthera_pardus
ENSCHIG00000009107	R3HCC1	90	71.084	ENSPTIG00000011230	R3HCC1	95	71.154	Panthera_tigris_altaica
ENSCHIG00000009107	R3HCC1	98	71.556	ENSPTRG00000020076	R3HCC1	99	66.444	Pan_troglodytes
ENSCHIG00000009107	R3HCC1	99	71.302	ENSPANG00000000453	R3HCC1	99	64.901	Papio_anubis
ENSCHIG00000009107	R3HCC1	89	36.341	ENSPKIG00000014426	-	95	35.696	Paramormyrops_kingsleyae
ENSCHIG00000009107	R3HCC1	89	35.556	ENSPKIG00000020397	-	95	35.309	Paramormyrops_kingsleyae
ENSCHIG00000009107	R3HCC1	97	47.149	ENSPSIG00000017664	R3HCC1	97	46.667	Pelodiscus_sinensis
ENSCHIG00000009107	R3HCC1	99	63.125	ENSPEMG00000007118	R3hcc1	100	62.708	Peromyscus_maniculatus_bairdii
ENSCHIG00000009107	R3HCC1	91	51.628	ENSPCIG00000022718	-	85	52.257	Phascolarctos_cinereus
ENSCHIG00000009107	R3HCC1	96	35.172	ENSPFOG00000022301	r3hcc1	90	34.793	Poecilia_formosa
ENSCHIG00000009107	R3HCC1	96	34.615	ENSPLAG00000010794	r3hcc1	90	34.842	Poecilia_latipinna
ENSCHIG00000009107	R3HCC1	96	35.172	ENSPMEG00000022515	r3hcc1	90	34.793	Poecilia_mexicana
ENSCHIG00000009107	R3HCC1	97	34.404	ENSPREG00000000713	r3hcc1	90	33.949	Poecilia_reticulata
ENSCHIG00000009107	R3HCC1	91	69.928	ENSPPYG00000018436	R3HCC1	99	70.883	Pongo_abelii
ENSCHIG00000009107	R3HCC1	69	85.430	ENSPCAG00000012229	R3HCC1	67	85.430	Procavia_capensis
ENSCHIG00000009107	R3HCC1	98	70.510	ENSPCOG00000027554	R3HCC1	99	70.732	Propithecus_coquereli
ENSCHIG00000009107	R3HCC1	99	72.506	ENSPVAG00000009829	R3HCC1	95	72.506	Pteropus_vampyrus
ENSCHIG00000009107	R3HCC1	62	45.113	ENSPNAG00000023875	r3hcc1	71	45.113	Pygocentrus_nattereri
ENSCHIG00000009107	R3HCC1	99	62.012	ENSRNOG00000016777	AABR07018321.1	82	60.575	Rattus_norvegicus
ENSCHIG00000009107	R3HCC1	99	71.965	ENSRBIG00000028045	R3HCC1	99	72.627	Rhinopithecus_bieti
ENSCHIG00000009107	R3HCC1	99	71.965	ENSRROG00000031126	R3HCC1	99	65.342	Rhinopithecus_roxellana
ENSCHIG00000009107	R3HCC1	98	72.727	ENSSBOG00000022590	R3HCC1	99	72.727	Saimiri_boliviensis_boliviensis
ENSCHIG00000009107	R3HCC1	99	53.173	ENSSHAG00000016526	-	64	74.051	Sarcophilus_harrisii
ENSCHIG00000009107	R3HCC1	96	31.395	ENSSFOG00015013507	r3hcc1	98	35.904	Scleropages_formosus
ENSCHIG00000009107	R3HCC1	91	35.116	ENSSMAG00000008647	r3hcc1	98	32.326	Scophthalmus_maximus
ENSCHIG00000009107	R3HCC1	96	32.543	ENSSDUG00000022786	r3hcc1	97	32.080	Seriola_dumerili
ENSCHIG00000009107	R3HCC1	96	32.599	ENSSLDG00000019031	r3hcc1	97	32.000	Seriola_lalandi_dorsalis
ENSCHIG00000009107	R3HCC1	51	80.435	ENSSARG00000013514	-	52	80.435	Sorex_araneus
ENSCHIG00000009107	R3HCC1	94	32.962	ENSSPAG00000013497	r3hcc1	98	32.962	Stegastes_partitus
ENSCHIG00000009107	R3HCC1	100	77.293	ENSSSCG00000039915	-	93	77.293	Sus_scrofa
ENSCHIG00000009107	R3HCC1	97	70.562	ENSSSCG00000037347	-	91	69.197	Sus_scrofa
ENSCHIG00000009107	R3HCC1	95	31.724	ENSTRUG00000015880	r3hcc1	98	31.724	Takifugu_rubripes
ENSCHIG00000009107	R3HCC1	98	70.000	ENSTTRG00000012247	R3HCC1	95	70.000	Tursiops_truncatus
ENSCHIG00000009107	R3HCC1	100	71.397	ENSUAMG00000007344	R3HCC1	100	71.179	Ursus_americanus
ENSCHIG00000009107	R3HCC1	100	69.651	ENSVVUG00000005056	R3HCC1	96	70.306	Vulpes_vulpes
ENSCHIG00000009107	R3HCC1	93	34.988	ENSXCOG00000017626	r3hcc1	89	34.135	Xiphophorus_couchianus
ENSCHIG00000009107	R3HCC1	97	35.147	ENSXMAG00000018375	r3hcc1	91	34.761	Xiphophorus_maculatus