EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCHIG00000009124 (Gene tree)
Gene ID
102186905
Gene Symbol
RBFOX3
Alias
FOX-3|HRNBP3|NeuN
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Capra_hircus
Status
putative
Strand
Plus strand
Length
19608 bases
Position
chr19:52518970-52538577
Accession
102186905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCHIP00000005037Fox-1_CPF12414.84.6e-4111
ENSCHIP00000005043Fox-1_CPF12414.86.6e-4111
ENSCHIP00000005037RRM_1PF00076.228.7e-1911
ENSCHIP00000005043RRM_1PF00076.228.9e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCHIT00000012612RBFOX3-2011122XM_018063655ENSCHIP00000005037373 (aa)XP_017919144UPI0005FB8651
ENSCHIT00000012621RBFOX3-2021029-ENSCHIP00000005043342 (aa)-UPI000D1965A9
Gene Model
Click here to download ENSCHIG00000009124's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000009124's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCHIG00000009124RBFOX39655.583ENSCHIG00000014027RBFOX29250.382
ENSCHIG00000009124RBFOX310057.442ENSCHIG00000023549RBFOX19155.422
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCHIG00000009124RBFOX39697.256ENSG00000167281RBFOX399100.000Homo_sapiens
ENSCHIG00000009124RBFOX310072.533ENSAPOG00000021630rbfox3b8268.975Acanthochromis_polyacanthus
ENSCHIG00000009124RBFOX37789.583ENSAPOG00000015658-6490.625Acanthochromis_polyacanthus
ENSCHIG00000009124RBFOX39874.878ENSAMEG00000014170RBFOX39374.146Ailuropoda_melanoleuca
ENSCHIG00000009124RBFOX36972.924ENSACIG00000003768-7272.901Amphilophus_citrinellus
ENSCHIG00000009124RBFOX38184.000ENSACIG00000010817rbfox3b9561.714Amphilophus_citrinellus
ENSCHIG00000009124RBFOX39671.745ENSAOCG00000012358rbfox3b8168.012Amphiprion_ocellaris
ENSCHIG00000009124RBFOX37786.538ENSAOCG00000010786-7393.333Amphiprion_ocellaris
ENSCHIG00000009124RBFOX37689.583ENSAPEG00000015891-7193.103Amphiprion_percula
ENSCHIG00000009124RBFOX37879.545ENSAPEG00000019081rbfox3b7493.333Amphiprion_percula
ENSCHIG00000009124RBFOX39772.055ENSATEG00000019945rbfox3b9669.231Anabas_testudineus
ENSCHIG00000009124RBFOX39366.761ENSATEG00000023101-9365.625Anabas_testudineus
ENSCHIG00000009124RBFOX39677.839ENSACAG00000016093RBFOX38377.168Anolis_carolinensis
ENSCHIG00000009124RBFOX39790.778ENSANAG00000023457RBFOX39690.778Aotus_nancymaae
ENSCHIG00000009124RBFOX39669.972ENSACLG00000025552-8169.253Astatotilapia_calliptera
ENSCHIG00000009124RBFOX310072.533ENSACLG00000020011rbfox3b9569.741Astatotilapia_calliptera
ENSCHIG00000009124RBFOX39667.127ENSAMXG00000042841rbfox3b8563.689Astyanax_mexicanus
ENSCHIG00000009124RBFOX39369.688ENSAMXG00000037246rbfox3a9070.571Astyanax_mexicanus
ENSCHIG00000009124RBFOX39699.695ENSBTAG00000006280RBFOX310099.695Bos_taurus
ENSCHIG00000009124RBFOX39396.238ENSCJAG00000009563RBFOX39796.238Callithrix_jacchus
ENSCHIG00000009124RBFOX37683.158ENSCAFG00000005547RBFOX310076.994Canis_familiaris
ENSCHIG00000009124RBFOX310098.123ENSCAFG00020008126RBFOX310098.123Canis_lupus_dingo
ENSCHIG00000009124RBFOX39696.960ENSTSYG00000029617RBFOX310096.960Carlito_syrichta
ENSCHIG00000009124RBFOX39895.368ENSCPOG00000021703RBFOX39894.278Cavia_porcellus
ENSCHIG00000009124RBFOX39396.238ENSCCAG00000028450RBFOX39796.238Cebus_capucinus
ENSCHIG00000009124RBFOX39491.022ENSCATG00000018349RBFOX383100.000Cercocebus_atys
ENSCHIG00000009124RBFOX310096.524ENSCLAG00000006449RBFOX310096.524Chinchilla_lanigera
ENSCHIG00000009124RBFOX39484.286ENSCSAG00000002355RBFOX39784.286Chlorocebus_sabaeus
ENSCHIG00000009124RBFOX39676.257ENSCPBG00000010904RBFOX39575.581Chrysemys_picta_bellii
ENSCHIG00000009124RBFOX310097.855ENSCANG00000043120RBFOX310097.855Colobus_angolensis_palliatus
ENSCHIG00000009124RBFOX39892.896ENSCGRG00001019476Rbfox39893.716Cricetulus_griseus_chok1gshd
ENSCHIG00000009124RBFOX39892.896ENSCGRG00000003268Rbfox39893.716Cricetulus_griseus_crigri
ENSCHIG00000009124RBFOX39956.499ENSCSEG00000020606RBFOX38756.196Cynoglossus_semilaevis
ENSCHIG00000009124RBFOX38188.000ENSCSEG00000015567RBFOX37387.500Cynoglossus_semilaevis
ENSCHIG00000009124RBFOX39671.745ENSCVAG00000006882rbfox3b8168.012Cyprinodon_variegatus
ENSCHIG00000009124RBFOX39268.857ENSDARG00000010083rbfox3a9169.714Danio_rerio
ENSCHIG00000009124RBFOX39664.438ENSDARG00000074310rbfox3b9766.942Danio_rerio
ENSCHIG00000009124RBFOX38287.296ENSDNOG00000039391RBFOX38187.296Dasypus_novemcinctus
ENSCHIG00000009124RBFOX39683.799ENSDORG00000005352Rbfox39681.564Dipodomys_ordii
ENSCHIG00000009124RBFOX38453.106ENSEBUG00000013559RBFOX36255.147Eptatretus_burgeri
ENSCHIG00000009124RBFOX310062.725ENSEBUG00000002129RBFOX39261.765Eptatretus_burgeri
ENSCHIG00000009124RBFOX39281.503ENSEASG00005005059RBFOX39582.370Equus_asinus_asinus
ENSCHIG00000009124RBFOX39281.214ENSECAG00000023811RBFOX39582.081Equus_caballus
ENSCHIG00000009124RBFOX39880.822ENSEEUG00000013974RBFOX39879.452Erinaceus_europaeus
ENSCHIG00000009124RBFOX310072.074ENSELUG00000017963rbfox3b9564.557Esox_lucius
ENSCHIG00000009124RBFOX39394.044ENSFCAG00000002555RBFOX39794.044Felis_catus
ENSCHIG00000009124RBFOX39665.404ENSFALG00000012288RBFOX39261.871Ficedula_albicollis
ENSCHIG00000009124RBFOX39891.008ENSFDAG00000007489RBFOX39789.918Fukomys_damarensis
ENSCHIG00000009124RBFOX39669.394ENSFHEG00000008550rbfox3b9565.190Fundulus_heteroclitus
ENSCHIG00000009124RBFOX310064.191ENSGMOG00000019304-9966.667Gadus_morhua
ENSCHIG00000009124RBFOX39280.523ENSGALG00000032889RBFOX38380.523Gallus_gallus
ENSCHIG00000009124RBFOX38184.000ENSGAFG00000005025rbfox3b8668.300Gambusia_affinis
ENSCHIG00000009124RBFOX39671.978ENSGACG00000002138-9672.527Gasterosteus_aculeatus
ENSCHIG00000009124RBFOX39676.536ENSGAGG00000020025RBFOX39575.872Gopherus_agassizii
ENSCHIG00000009124RBFOX310097.587ENSGGOG00000012546RBFOX310097.587Gorilla_gorilla
ENSCHIG00000009124RBFOX310072.533ENSHBUG00000018099rbfox3b8268.698Haplochromis_burtoni
ENSCHIG00000009124RBFOX310070.292ENSHBUG00000023098-9069.613Haplochromis_burtoni
ENSCHIG00000009124RBFOX39894.851ENSHGLG00000008679RBFOX39893.767Heterocephalus_glaber_female
ENSCHIG00000009124RBFOX39890.786ENSHGLG00100014739RBFOX39889.160Heterocephalus_glaber_male
ENSCHIG00000009124RBFOX39465.527ENSHCOG00000007444RBFOX37864.756Hippocampus_comes
ENSCHIG00000009124RBFOX37685.106ENSHCOG00000001863RBFOX38190.000Hippocampus_comes
ENSCHIG00000009124RBFOX39763.989ENSIPUG00000021966rbfox3b8875.949Ictalurus_punctatus
ENSCHIG00000009124RBFOX39668.956ENSIPUG00000012010rbfox3a7388.889Ictalurus_punctatus
ENSCHIG00000009124RBFOX39892.896ENSSTOG00000026817RBFOX39792.896Ictidomys_tridecemlineatus
ENSCHIG00000009124RBFOX39896.429ENSJJAG00000014167Rbfox39896.429Jaculus_jaculus
ENSCHIG00000009124RBFOX39671.745ENSKMAG00000006726rbfox3b8168.012Kryptolebias_marmoratus
ENSCHIG00000009124RBFOX310072.267ENSLBEG00000004030rbfox3b9561.143Labrus_bergylta
ENSCHIG00000009124RBFOX39272.126ENSLBEG00000022508-8170.690Labrus_bergylta
ENSCHIG00000009124RBFOX39661.800ENSLACG00000018409-9361.800Latimeria_chalumnae
ENSCHIG00000009124RBFOX39272.989ENSLOCG00000012267rbfox3a9074.138Lepisosteus_oculatus
ENSCHIG00000009124RBFOX39893.425ENSLAFG00000016623RBFOX39893.425Loxodonta_africana
ENSCHIG00000009124RBFOX39697.214ENSMFAG00000002247RBFOX310097.214Macaca_fascicularis
ENSCHIG00000009124RBFOX39697.256ENSMMUG00000023028RBFOX310097.256Macaca_mulatta
ENSCHIG00000009124RBFOX39891.758ENSMNEG00000041147RBFOX39791.484Macaca_nemestrina
ENSCHIG00000009124RBFOX39788.462ENSMLEG00000025686RBFOX39784.000Mandrillus_leucophaeus
ENSCHIG00000009124RBFOX38184.000ENSMAMG00000019810rbfox3b9561.095Mastacembelus_armatus
ENSCHIG00000009124RBFOX39666.038ENSMAMG00000020600-9264.324Mastacembelus_armatus
ENSCHIG00000009124RBFOX36464.815ENSMZEG00005003055-5490.323Maylandia_zebra
ENSCHIG00000009124RBFOX310072.533ENSMZEG00005000781rbfox3b8268.698Maylandia_zebra
ENSCHIG00000009124RBFOX35190.104ENSMGAG00000005600RBFOX37390.104Meleagris_gallopavo
ENSCHIG00000009124RBFOX39693.889ENSMAUG00000013543Rbfox39592.698Mesocricetus_auratus
ENSCHIG00000009124RBFOX310095.710ENSMICG00000014898RBFOX310095.710Microcebus_murinus
ENSCHIG00000009124RBFOX39892.329ENSMOCG00000015373Rbfox39892.329Microtus_ochrogaster
ENSCHIG00000009124RBFOX39668.306ENSMMOG00000020193rbfox3b9162.274Mola_mola
ENSCHIG00000009124RBFOX39280.233ENSMODG00000002089RBFOX38380.233Monodelphis_domestica
ENSCHIG00000009124RBFOX310071.353ENSMALG00000018270-8690.000Monopterus_albus
ENSCHIG00000009124RBFOX39670.914ENSMALG00000020407rbfox3b8167.147Monopterus_albus
ENSCHIG00000009124RBFOX39892.877MGP_CAROLIEiJ_G0017487Rbfox310096.552Mus_caroli
ENSCHIG00000009124RBFOX39893.973ENSMUSG00000025576Rbfox310096.552Mus_musculus
ENSCHIG00000009124RBFOX39893.169MGP_PahariEiJ_G0018614Rbfox310097.241Mus_pahari
ENSCHIG00000009124RBFOX39893.151MGP_SPRETEiJ_G0018331Rbfox310096.552Mus_spretus
ENSCHIG00000009124RBFOX39877.057ENSMPUG00000012319RBFOX39277.057Mustela_putorius_furo
ENSCHIG00000009124RBFOX39893.151ENSNGAG00000018006Rbfox39893.151Nannospalax_galili
ENSCHIG00000009124RBFOX39670.637ENSNBRG00000010102rbfox3b7492.857Neolamprologus_brichardi
ENSCHIG00000009124RBFOX37690.909ENSNBRG00000022885-7893.333Neolamprologus_brichardi
ENSCHIG00000009124RBFOX35996.429ENSNLEG00000000153-7996.429Nomascus_leucogenys
ENSCHIG00000009124RBFOX39265.988ENSMEUG00000004218-9665.988Notamacropus_eugenii
ENSCHIG00000009124RBFOX36594.675ENSOPRG00000016279-7394.675Ochotona_princeps
ENSCHIG00000009124RBFOX310096.524ENSODEG00000009433RBFOX310096.524Octodon_degus
ENSCHIG00000009124RBFOX39670.523ENSONIG00000007282-8769.828Oreochromis_niloticus
ENSCHIG00000009124RBFOX310077.513ENSONIG00000009549rbfox3b9674.931Oreochromis_niloticus
ENSCHIG00000009124RBFOX37682.807ENSOCUG00000014217RBFOX37880.351Oryctolagus_cuniculus
ENSCHIG00000009124RBFOX310072.340ENSORLG00000000905rbfox3b6766.048Oryzias_latipes
ENSCHIG00000009124RBFOX310072.340ENSORLG00020018030rbfox3b8964.873Oryzias_latipes_hni
ENSCHIG00000009124RBFOX310069.388ENSORLG00015009200rbfox3b8593.333Oryzias_latipes_hsok
ENSCHIG00000009124RBFOX36475.581ENSOMEG00000014677rbfox3b7676.526Oryzias_melastigma
ENSCHIG00000009124RBFOX39677.546ENSOGAG00000029595RBFOX39077.546Otolemur_garnettii
ENSCHIG00000009124RBFOX369100.000ENSOARG00000002908RBFOX38958.701Ovis_aries
ENSCHIG00000009124RBFOX38996.997ENSPPAG00000025383RBFOX39497.020Pan_paniscus
ENSCHIG00000009124RBFOX39393.730ENSPPRG00000007819RBFOX39793.730Panthera_pardus
ENSCHIG00000009124RBFOX310097.587ENSPTRG00000009727RBFOX310097.587Pan_troglodytes
ENSCHIG00000009124RBFOX39491.022ENSPANG00000019837RBFOX39784.000Papio_anubis
ENSCHIG00000009124RBFOX310060.428ENSPKIG00000022633-8555.710Paramormyrops_kingsleyae
ENSCHIG00000009124RBFOX39674.033ENSPKIG00000010299rbfox3a8565.344Paramormyrops_kingsleyae
ENSCHIG00000009124RBFOX38470.794ENSPMGG00000008000rbfox3b7768.667Periophthalmus_magnuspinnatus
ENSCHIG00000009124RBFOX39892.603ENSPEMG00000010500Rbfox39892.603Peromyscus_maniculatus_bairdii
ENSCHIG00000009124RBFOX36361.355ENSPMAG00000008689rbfox3b9961.355Petromyzon_marinus
ENSCHIG00000009124RBFOX39293.605ENSPCIG00000005766RBFOX39693.605Phascolarctos_cinereus
ENSCHIG00000009124RBFOX310072.533ENSPFOG00000018294rbfox3b9268.652Poecilia_formosa
ENSCHIG00000009124RBFOX36586.885ENSPLAG00000000481rbfox3b6693.103Poecilia_latipinna
ENSCHIG00000009124RBFOX39669.394ENSPMEG00000022997rbfox3b9565.190Poecilia_mexicana
ENSCHIG00000009124RBFOX39771.781ENSPREG00000012886rbfox3b8668.300Poecilia_reticulata
ENSCHIG00000009124RBFOX39872.802ENSPPYG00000008704RBFOX39372.802Pongo_abelii
ENSCHIG00000009124RBFOX39289.855ENSPCAG00000001401RBFOX39689.855Procavia_capensis
ENSCHIG00000009124RBFOX39994.362ENSPCOG00000012689RBFOX310095.822Propithecus_coquereli
ENSCHIG00000009124RBFOX39284.971ENSPVAG00000015243RBFOX39685.838Pteropus_vampyrus
ENSCHIG00000009124RBFOX37290.000ENSPNYG00000010414rbfox3b7492.857Pundamilia_nyererei
ENSCHIG00000009124RBFOX37393.548ENSPNYG00000009079-7493.333Pundamilia_nyererei
ENSCHIG00000009124RBFOX39670.330ENSPNAG00000002889rbfox3a9361.875Pygocentrus_nattereri
ENSCHIG00000009124RBFOX37887.500ENSPNAG00000018173rbfox3b8372.449Pygocentrus_nattereri
ENSCHIG00000009124RBFOX39893.169ENSRNOG00000003386Rbfox39893.989Rattus_norvegicus
ENSCHIG00000009124RBFOX39491.331ENSRBIG00000040449RBFOX378100.000Rhinopithecus_bieti
ENSCHIG00000009124RBFOX39491.331ENSRROG00000000766RBFOX39784.286Rhinopithecus_roxellana
ENSCHIG00000009124RBFOX39896.703ENSSBOG00000031591RBFOX39896.703Saimiri_boliviensis_boliviensis
ENSCHIG00000009124RBFOX39278.275ENSSHAG00000016076RBFOX39578.275Sarcophilus_harrisii
ENSCHIG00000009124RBFOX39672.652ENSSFOG00015023260rbfox3a8970.662Scleropages_formosus
ENSCHIG00000009124RBFOX39259.885ENSSFOG00015004716RBFOX38955.521Scleropages_formosus
ENSCHIG00000009124RBFOX310069.388ENSSMAG00000012618rbfox3b7165.289Scophthalmus_maximus
ENSCHIG00000009124RBFOX39669.972ENSSMAG00000019052-9568.103Scophthalmus_maximus
ENSCHIG00000009124RBFOX39664.706ENSSDUG00000015801-7693.333Seriola_dumerili
ENSCHIG00000009124RBFOX39669.394ENSSDUG00000023183rbfox3b9565.190Seriola_dumerili
ENSCHIG00000009124RBFOX39671.745ENSSLDG00000000149rbfox3b8168.012Seriola_lalandi_dorsalis
ENSCHIG00000009124RBFOX37788.235ENSSLDG00000016098-7493.333Seriola_lalandi_dorsalis
ENSCHIG00000009124RBFOX39276.301ENSSPUG00000011733RBFOX39575.434Sphenodon_punctatus
ENSCHIG00000009124RBFOX38184.000ENSSPAG00000017571rbfox3b7771.429Stegastes_partitus
ENSCHIG00000009124RBFOX38563.863ENSSPAG00000004898-7561.589Stegastes_partitus
ENSCHIG00000009124RBFOX38897.576ENSSSCG00000039498RBFOX310097.576Sus_scrofa
ENSCHIG00000009124RBFOX310068.435ENSTRUG00000004894rbfox3b9065.583Takifugu_rubripes
ENSCHIG00000009124RBFOX310061.982ENSTNIG00000011278rbfox3b9258.950Tetraodon_nigroviridis
ENSCHIG00000009124RBFOX39664.246ENSTBEG00000004296-8969.880Tupaia_belangeri
ENSCHIG00000009124RBFOX39292.151ENSTTRG00000003676RBFOX39692.151Tursiops_truncatus
ENSCHIG00000009124RBFOX39483.714ENSUAMG00000004668RBFOX39782.857Ursus_americanus
ENSCHIG00000009124RBFOX39698.050ENSVVUG00000017864RBFOX38998.050Vulpes_vulpes
ENSCHIG00000009124RBFOX310059.000ENSXETG00000020236rbfox39158.247Xenopus_tropicalis
ENSCHIG00000009124RBFOX39670.442ENSXCOG00000018262rbfox3b7779.039Xiphophorus_couchianus
ENSCHIG00000009124RBFOX310072.533ENSXMAG00000012939rbfox3b9558.355Xiphophorus_maculatus

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