EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000009148 (Gene tree)
Gene ID: 102184427
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 1038 bases
Position: chr7:23255289-23256326
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000005003	RRM_1	PF00076.22	4.1e-31	1	2
ENSCHIP00000005003	RRM_1	PF00076.22	4.1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000012573	-	1038	-	ENSCHIP00000005003	345 (aa)	-	UPI000D191E92

Gene Model

Click here to download ENSCHIG00000009148's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000009148's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000009148	-	57	40.191	ENSCHIG00000010787	SRSF1	78	41.148
ENSCHIG00000009148	-	52	65.363	ENSCHIG00000016794	SRSF5	66	64.130
ENSCHIG00000009148	-	100	99.420	ENSCHIG00000015890	-	100	99.420

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000009148	-	100	97.110	ENSG00000124193	SRSF6	100	97.110	Homo_sapiens
ENSCHIG00000009148	-	94	87.385	ENSAMEG00000003710	SRSF6	94	87.385	Ailuropoda_melanoleuca
ENSCHIG00000009148	-	76	71.103	ENSACIG00000020091	-	95	80.315	Amphilophus_citrinellus
ENSCHIG00000009148	-	53	85.246	ENSAOCG00000004309	-	57	83.152	Amphiprion_ocellaris
ENSCHIG00000009148	-	66	71.179	ENSAPEG00000020746	-	66	79.787	Amphiprion_percula
ENSCHIG00000009148	-	53	87.568	ENSAPEG00000013086	-	53	87.097	Amphiprion_percula
ENSCHIG00000009148	-	53	81.081	ENSATEG00000007255	-	71	80.000	Anabas_testudineus
ENSCHIG00000009148	-	94	80.982	ENSACAG00000002061	SRSF6	92	82.298	Anolis_carolinensis
ENSCHIG00000009148	-	100	96.243	ENSANAG00000024080	SRSF6	100	96.243	Aotus_nancymaae
ENSCHIG00000009148	-	53	82.258	ENSAMXG00000042692	-	96	77.037	Astyanax_mexicanus
ENSCHIG00000009148	-	53	85.484	ENSAMXG00000003101	-	51	83.684	Astyanax_mexicanus
ENSCHIG00000009148	-	100	98.841	ENSBTAG00000008527	SRSF6	100	98.841	Bos_taurus
ENSCHIG00000009148	-	78	97.761	ENSCJAG00000048403	SRSF6	99	97.761	Callithrix_jacchus
ENSCHIG00000009148	-	100	99.130	ENSCAFG00000009289	SRSF6	100	99.130	Canis_familiaris
ENSCHIG00000009148	-	100	99.130	ENSCAFG00020013559	SRSF6	100	99.130	Canis_lupus_dingo
ENSCHIG00000009148	-	100	83.478	ENSTSYG00000026476	SRSF6	100	83.478	Carlito_syrichta
ENSCHIG00000009148	-	94	79.321	ENSCPOG00000011761	SRSF6	58	96.154	Cavia_porcellus
ENSCHIG00000009148	-	100	96.532	ENSCCAG00000026018	-	100	96.532	Cebus_capucinus
ENSCHIG00000009148	-	94	69.018	ENSCCAG00000018540	-	62	85.638	Cebus_capucinus
ENSCHIG00000009148	-	100	97.101	ENSCATG00000030794	SRSF6	100	97.101	Cercocebus_atys
ENSCHIG00000009148	-	94	96.296	ENSCLAG00000010247	SRSF6	94	96.296	Chinchilla_lanigera
ENSCHIG00000009148	-	100	97.101	ENSCSAG00000014022	SRSF6	100	97.101	Chlorocebus_sabaeus
ENSCHIG00000009148	-	100	82.899	ENSCHOG00000000561	SRSF6	100	82.899	Choloepus_hoffmanni
ENSCHIG00000009148	-	54	90.426	ENSCPBG00000018200	SRSF6	94	84.404	Chrysemys_picta_bellii
ENSCHIG00000009148	-	100	96.812	ENSCANG00000037774	-	100	96.812	Colobus_angolensis_palliatus
ENSCHIG00000009148	-	100	83.188	ENSCANG00000042529	-	100	83.188	Colobus_angolensis_palliatus
ENSCHIG00000009148	-	99	96.471	ENSCGRG00001022339	Srsf6	99	96.471	Cricetulus_griseus_chok1gshd
ENSCHIG00000009148	-	63	95.370	ENSCGRG00000006618	Srsf6	100	95.370	Cricetulus_griseus_crigri
ENSCHIG00000009148	-	53	82.888	ENSDARG00000016783	srsf6b	82	89.744	Danio_rerio
ENSCHIG00000009148	-	94	95.679	ENSDNOG00000008410	SRSF6	94	95.679	Dasypus_novemcinctus
ENSCHIG00000009148	-	100	96.522	ENSDORG00000028378	Srsf6	100	96.522	Dipodomys_ordii
ENSCHIG00000009148	-	93	93.125	ENSETEG00000006221	SRSF6	94	90.741	Echinops_telfairi
ENSCHIG00000009148	-	100	98.551	ENSEASG00005023429	SRSF6	100	98.551	Equus_asinus_asinus
ENSCHIG00000009148	-	100	98.551	ENSECAG00000023932	SRSF6	100	98.551	Equus_caballus
ENSCHIG00000009148	-	57	95.385	ENSEEUG00000002324	SRSF6	90	95.431	Erinaceus_europaeus
ENSCHIG00000009148	-	65	70.536	ENSELUG00000013506	SRSF6	70	87.179	Esox_lucius
ENSCHIG00000009148	-	100	99.130	ENSFCAG00000032814	SRSF6	100	99.130	Felis_catus
ENSCHIG00000009148	-	94	80.864	ENSFDAG00000012191	SRSF6	93	78.395	Fukomys_damarensis
ENSCHIG00000009148	-	87	71.053	ENSFHEG00000023065	srsf6a	55	87.500	Fundulus_heteroclitus
ENSCHIG00000009148	-	52	81.768	ENSGMOG00000014458	srsf6a	52	77.083	Gadus_morhua
ENSCHIG00000009148	-	93	82.012	ENSGALG00000000990	SRSF6	94	82.121	Gallus_gallus
ENSCHIG00000009148	-	87	58.580	ENSGACG00000006084	srsf6a	53	82.796	Gasterosteus_aculeatus
ENSCHIG00000009148	-	54	90.426	ENSGAGG00000003238	SRSF6	94	84.404	Gopherus_agassizii
ENSCHIG00000009148	-	100	97.110	ENSGGOG00000009808	SRSF6	100	97.110	Gorilla_gorilla
ENSCHIG00000009148	-	63	73.684	ENSHBUG00000006386	-	58	83.696	Haplochromis_burtoni
ENSCHIG00000009148	-	90	75.884	ENSHGLG00000007701	-	58	77.005	Heterocephalus_glaber_female
ENSCHIG00000009148	-	94	96.296	ENSHGLG00000007348	SRSF6	94	96.296	Heterocephalus_glaber_female
ENSCHIG00000009148	-	94	81.173	ENSHGLG00100005043	SRSF6	93	78.704	Heterocephalus_glaber_male
ENSCHIG00000009148	-	53	81.421	ENSHCOG00000002740	srsf6a	57	80.978	Hippocampus_comes
ENSCHIG00000009148	-	53	85.870	ENSIPUG00000004776	-	72	75.336	Ictalurus_punctatus
ENSCHIG00000009148	-	100	95.942	ENSSTOG00000010866	SRSF6	100	95.942	Ictidomys_tridecemlineatus
ENSCHIG00000009148	-	56	94.301	ENSJJAG00000020690	Srsf6	91	93.333	Jaculus_jaculus
ENSCHIG00000009148	-	87	66.113	ENSKMAG00000011934	srsf6a	59	84.783	Kryptolebias_marmoratus
ENSCHIG00000009148	-	53	83.696	ENSLBEG00000007356	srsf6a	52	84.409	Labrus_bergylta
ENSCHIG00000009148	-	96	78.235	ENSLACG00000005466	SRSF6	96	72.866	Latimeria_chalumnae
ENSCHIG00000009148	-	75	95.753	ENSLAFG00000006682	SRSF6	100	95.753	Loxodonta_africana
ENSCHIG00000009148	-	100	97.101	ENSMFAG00000036925	SRSF6	100	97.101	Macaca_fascicularis
ENSCHIG00000009148	-	100	97.101	ENSMMUG00000006742	SRSF6	100	97.101	Macaca_mulatta
ENSCHIG00000009148	-	93	95.652	ENSMNEG00000038270	-	94	95.679	Macaca_nemestrina
ENSCHIG00000009148	-	100	96.522	ENSMNEG00000027392	-	100	96.522	Macaca_nemestrina
ENSCHIG00000009148	-	63	97.222	ENSMLEG00000031524	SRSF6	100	97.222	Mandrillus_leucophaeus
ENSCHIG00000009148	-	53	87.027	ENSMAMG00000017161	srsf6a	53	86.559	Mastacembelus_armatus
ENSCHIG00000009148	-	62	71.861	ENSMZEG00005008032	-	57	83.696	Maylandia_zebra
ENSCHIG00000009148	-	52	82.873	ENSMZEG00005020658	-	60	81.768	Maylandia_zebra
ENSCHIG00000009148	-	100	97.110	ENSMICG00000008537	SRSF6	100	97.110	Microcebus_murinus
ENSCHIG00000009148	-	63	95.370	ENSMOCG00000018738	Srsf6	100	95.370	Microtus_ochrogaster
ENSCHIG00000009148	-	54	93.548	ENSMODG00000003107	SRSF6	95	86.462	Monodelphis_domestica
ENSCHIG00000009148	-	94	95.988	MGP_CAROLIEiJ_G0024606	Srsf6	95	95.988	Mus_caroli
ENSCHIG00000009148	-	94	96.296	ENSMUSG00000016921	Srsf6	95	96.296	Mus_musculus
ENSCHIG00000009148	-	94	96.296	MGP_PahariEiJ_G0026050	Srsf6	95	95.988	Mus_pahari
ENSCHIG00000009148	-	94	96.296	MGP_SPRETEiJ_G0025528	Srsf6	95	96.296	Mus_spretus
ENSCHIG00000009148	-	83	98.958	ENSMPUG00000017692	SRSF6	99	98.958	Mustela_putorius_furo
ENSCHIG00000009148	-	93	82.609	ENSMLUG00000016618	SRSF6	94	82.716	Myotis_lucifugus
ENSCHIG00000009148	-	99	94.706	ENSNGAG00000017560	Srsf6	99	94.706	Nannospalax_galili
ENSCHIG00000009148	-	53	82.514	ENSNBRG00000014709	-	58	83.696	Neolamprologus_brichardi
ENSCHIG00000009148	-	100	97.110	ENSNLEG00000006524	SRSF6	100	97.110	Nomascus_leucogenys
ENSCHIG00000009148	-	54	93.548	ENSMEUG00000014615	SRSF6	62	94.681	Notamacropus_eugenii
ENSCHIG00000009148	-	75	97.297	ENSOPRG00000002017	-	100	97.297	Ochotona_princeps
ENSCHIG00000009148	-	53	84.153	ENSONIG00000020247	-	53	84.239	Oreochromis_niloticus
ENSCHIG00000009148	-	84	80.328	ENSOCUG00000009785	-	98	84.459	Oryctolagus_cuniculus
ENSCHIG00000009148	-	74	57.087	ENSOCUG00000023999	-	70	62.011	Oryctolagus_cuniculus
ENSCHIG00000009148	-	94	96.308	ENSOGAG00000014468	SRSF6	94	96.605	Otolemur_garnettii
ENSCHIG00000009148	-	93	95.342	ENSOARG00000003117	SRSF6	94	95.370	Ovis_aries
ENSCHIG00000009148	-	100	96.821	ENSPPAG00000034327	-	100	96.821	Pan_paniscus
ENSCHIG00000009148	-	90	83.601	ENSPPAG00000043131	-	100	85.852	Pan_paniscus
ENSCHIG00000009148	-	100	99.130	ENSPPRG00000008917	SRSF6	100	99.130	Panthera_pardus
ENSCHIG00000009148	-	63	99.537	ENSPTIG00000019153	SRSF6	100	99.537	Panthera_tigris_altaica
ENSCHIG00000009148	-	100	96.821	ENSPTRG00000044686	-	100	96.821	Pan_troglodytes
ENSCHIG00000009148	-	90	83.601	ENSPTRG00000046274	-	100	85.852	Pan_troglodytes
ENSCHIG00000009148	-	100	97.101	ENSPANG00000035224	SRSF6	100	97.101	Papio_anubis
ENSCHIG00000009148	-	100	66.286	ENSPKIG00000018463	-	77	91.026	Paramormyrops_kingsleyae
ENSCHIG00000009148	-	52	73.481	ENSPKIG00000015703	-	95	59.060	Paramormyrops_kingsleyae
ENSCHIG00000009148	-	89	71.290	ENSPMGG00000014963	srsf6a	55	88.043	Periophthalmus_magnuspinnatus
ENSCHIG00000009148	-	54	93.548	ENSPCIG00000003820	SRSF6	95	86.154	Phascolarctos_cinereus
ENSCHIG00000009148	-	53	87.931	ENSPFOG00000006437	srsf6a	50	82.105	Poecilia_formosa
ENSCHIG00000009148	-	87	64.780	ENSPLAG00000009243	srsf6a	80	81.102	Poecilia_latipinna
ENSCHIG00000009148	-	53	84.239	ENSPMEG00000006042	SRSF6	54	85.946	Poecilia_mexicana
ENSCHIG00000009148	-	100	97.110	ENSPPYG00000011019	SRSF6	100	97.110	Pongo_abelii
ENSCHIG00000009148	-	54	96.757	ENSPCAG00000010954	SRSF6	56	96.791	Procavia_capensis
ENSCHIG00000009148	-	100	97.399	ENSPCOG00000026364	SRSF6	100	97.399	Propithecus_coquereli
ENSCHIG00000009148	-	94	95.988	ENSPVAG00000015232	SRSF6	94	95.988	Pteropus_vampyrus
ENSCHIG00000009148	-	53	82.514	ENSPNYG00000004944	-	58	83.696	Pundamilia_nyererei
ENSCHIG00000009148	-	94	96.296	ENSRNOG00000006380	Srsf6	95	96.296	Rattus_norvegicus
ENSCHIG00000009148	-	100	95.362	ENSRBIG00000041414	SRSF6	100	95.362	Rhinopithecus_bieti
ENSCHIG00000009148	-	100	97.101	ENSRROG00000029989	SRSF6	100	97.101	Rhinopithecus_roxellana
ENSCHIG00000009148	-	100	96.243	ENSSBOG00000033708	-	100	96.243	Saimiri_boliviensis_boliviensis
ENSCHIG00000009148	-	93	69.159	ENSSBOG00000034078	-	54	75.138	Saimiri_boliviensis_boliviensis
ENSCHIG00000009148	-	54	93.548	ENSSHAG00000012805	SRSF6	95	86.462	Sarcophilus_harrisii
ENSCHIG00000009148	-	89	64.392	ENSSFOG00015019681	-	53	80.928	Scleropages_formosus
ENSCHIG00000009148	-	53	80.220	ENSSMAG00000017447	-	55	79.891	Scophthalmus_maximus
ENSCHIG00000009148	-	53	87.027	ENSSDUG00000016097	srsf6a	53	86.559	Seriola_dumerili
ENSCHIG00000009148	-	53	87.027	ENSSLDG00000022841	srsf6a	54	86.559	Seriola_lalandi_dorsalis
ENSCHIG00000009148	-	75	97.683	ENSSARG00000001602	SRSF6	100	97.683	Sorex_araneus
ENSCHIG00000009148	-	53	92.896	ENSSPUG00000004967	SRSF6	94	86.728	Sphenodon_punctatus
ENSCHIG00000009148	-	75	69.925	ENSSPAG00000002362	srsf6a	67	85.185	Stegastes_partitus
ENSCHIG00000009148	-	100	98.551	ENSSSCG00000007362	SRSF6	100	98.551	Sus_scrofa
ENSCHIG00000009148	-	93	84.308	ENSTGUG00000003455	SRSF6	94	84.098	Taeniopygia_guttata
ENSCHIG00000009148	-	87	69.967	ENSTNIG00000001692	srsf6a	57	84.946	Tetraodon_nigroviridis
ENSCHIG00000009148	-	85	92.808	ENSTBEG00000013448	SRSF6	92	93.127	Tupaia_belangeri
ENSCHIG00000009148	-	75	98.842	ENSTTRG00000015410	SRSF6	100	98.842	Tursiops_truncatus
ENSCHIG00000009148	-	100	99.130	ENSUAMG00000003559	SRSF6	100	99.130	Ursus_americanus
ENSCHIG00000009148	-	63	99.537	ENSUMAG00000001154	SRSF6	100	99.537	Ursus_maritimus
ENSCHIG00000009148	-	83	100.000	ENSVPAG00000003016	SRSF6	83	100.000	Vicugna_pacos
ENSCHIG00000009148	-	53	85.792	ENSXMAG00000021849	srsf6a	55	85.326	Xiphophorus_maculatus