EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000009297 (Gene tree)
Gene ID: 102169199
Gene Symbol: PRDM14
Alias: -
Full Name: PR/SET domain 14
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 21123 bases
Position: chr14:48317841-48338963
Accession: 102169199
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000005185	zf-C2H2	PF00096.26	3.4e-20	1	3
ENSCHIP00000005185	zf-C2H2	PF00096.26	3.4e-20	2	3
ENSCHIP00000005185	zf-C2H2	PF00096.26	3.4e-20	3	3
ENSCHIP00000005189	zf-C2H2	PF00096.26	3.4e-20	1	3
ENSCHIP00000005189	zf-C2H2	PF00096.26	3.4e-20	2	3
ENSCHIP00000005189	zf-C2H2	PF00096.26	3.4e-20	3	3
ENSCHIP00000005185	zf-met	PF12874.7	0.00023	1	1
ENSCHIP00000005189	zf-met	PF12874.7	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000012796	PRDM14-201	3064	XM_018058124	ENSCHIP00000005185	571 (aa)	XP_017913613	UPI000D18CA4E
ENSCHIT00000012801	PRDM14-202	3330	-	ENSCHIP00000005189	571 (aa)	-	UPI000D18CA4E

Gene Model

Click here to download ENSCHIG00000009297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000009297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000009297	PRDM14	53	36.134	ENSCHIG00000018772	PRDM5	97	36.134
ENSCHIG00000009297	PRDM14	56	32.571	ENSCHIG00000016222	PRDM15	50	37.234
ENSCHIG00000009297	PRDM14	59	39.189	ENSCHIG00000025005	PRDM12	80	32.188

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000009297	PRDM14	67	57.441	ENSACIG00000022698	prdm14	62	57.441	Amphilophus_citrinellus
ENSCHIG00000009297	PRDM14	67	58.225	ENSACLG00000025407	prdm14	62	58.225	Astatotilapia_calliptera
ENSCHIG00000009297	PRDM14	66	64.021	ENSAMXG00000000512	prdm14	85	60.238	Astyanax_mexicanus
ENSCHIG00000009297	PRDM14	100	97.382	ENSBTAG00000000060	PRDM14	100	97.382	Bos_taurus
ENSCHIG00000009297	PRDM14	71	83.744	ENSTSYG00000010610	PRDM14	98	83.744	Carlito_syrichta
ENSCHIG00000009297	PRDM14	100	61.257	ENSCPOG00000027176	PRDM14	100	61.257	Cavia_porcellus
ENSCHIG00000009297	PRDM14	100	68.576	ENSCCAG00000026032	PRDM14	100	71.528	Cebus_capucinus
ENSCHIG00000009297	PRDM14	100	72.049	ENSCLAG00000001937	PRDM14	99	72.049	Chinchilla_lanigera
ENSCHIG00000009297	PRDM14	74	53.097	ENSGACG00000002829	prdm14	90	53.097	Gasterosteus_aculeatus
ENSCHIG00000009297	PRDM14	67	65.274	ENSHBUG00000019660	prdm14	63	65.274	Haplochromis_burtoni
ENSCHIG00000009297	PRDM14	67	65.274	ENSMZEG00005021597	prdm14	63	65.274	Maylandia_zebra
ENSCHIG00000009297	PRDM14	69	63.409	ENSNBRG00000023669	prdm14	66	63.409	Neolamprologus_brichardi
ENSCHIG00000009297	PRDM14	100	73.183	ENSODEG00000003245	PRDM14	100	73.183	Octodon_degus
ENSCHIG00000009297	PRDM14	95	90.185	ENSOARG00000003528	PRDM14	100	90.185	Ovis_aries
ENSCHIG00000009297	PRDM14	67	65.274	ENSPNYG00000001938	prdm14	63	65.274	Pundamilia_nyererei
ENSCHIG00000009297	PRDM14	67	65.535	ENSSDUG00000013311	prdm14	88	50.794	Seriola_dumerili
ENSCHIG00000009297	PRDM14	67	65.274	ENSSLDG00000006506	prdm14	89	50.441	Seriola_lalandi_dorsalis
ENSCHIG00000009297	PRDM14	66	66.053	ENSTNIG00000008194	prdm14	100	66.053	Tetraodon_nigroviridis
ENSCHIG00000009297	PRDM14	53	88.889	ENSVPAG00000010736	-	63	88.889	Vicugna_pacos