EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000009312 (Gene tree)
Gene ID: 102191291
Gene Symbol: RIOK3
Alias: SUDD
Full Name: RIO kinase 3
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 19145 bases
Position: chr24:33469894-33489038
Accession: 102191291
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000005309	RIO1	PF01163.22	6.8e-74	1	1
ENSCHIP00000005298	RIO1	PF01163.22	7.4e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000012941	RIOK3-201	1560	XM_005697046	ENSCHIP00000005298	519 (aa)	XP_005697103	UPI0008467C0D
ENSCHIT00000012955	RIOK3-202	1509	-	ENSCHIP00000005309	502 (aa)	-	UPI000D19083E

Gene Model

Click here to download ENSCHIG00000009312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000009312's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000009312	RIOK3	61	42.492	ENSCHIG00000001534	RIOK1	53	42.492

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000009312	RIOK3	100	96.339	ENSG00000101782	RIOK3	100	96.339	Homo_sapiens
ENSCHIG00000009312	RIOK3	98	72.691	ENSAPOG00000020861	riok3	97	72.189	Acanthochromis_polyacanthus
ENSCHIG00000009312	RIOK3	100	97.495	ENSAMEG00000013754	RIOK3	85	97.495	Ailuropoda_melanoleuca
ENSCHIG00000009312	RIOK3	98	74.597	ENSACIG00000019894	riok3	98	74.451	Amphilophus_citrinellus
ENSCHIG00000009312	RIOK3	98	74.699	ENSAOCG00000007172	riok3	99	74.949	Amphiprion_ocellaris
ENSCHIG00000009312	RIOK3	98	74.498	ENSAPEG00000002536	riok3	99	74.127	Amphiprion_percula
ENSCHIG00000009312	RIOK3	99	73.347	ENSATEG00000018303	riok3	99	72.817	Anabas_testudineus
ENSCHIG00000009312	RIOK3	99	87.824	ENSAPLG00000006497	RIOK3	99	86.602	Anas_platyrhynchos
ENSCHIG00000009312	RIOK3	98	84.677	ENSACAG00000000159	RIOK3	98	83.398	Anolis_carolinensis
ENSCHIG00000009312	RIOK3	100	71.374	ENSANAG00000030146	RIOK3	100	71.374	Aotus_nancymaae
ENSCHIG00000009312	RIOK3	96	74.897	ENSACLG00000018966	riok3	98	74.897	Astatotilapia_calliptera
ENSCHIG00000009312	RIOK3	96	75.413	ENSAMXG00000015617	riok3	99	72.414	Astyanax_mexicanus
ENSCHIG00000009312	RIOK3	100	98.459	ENSBTAG00000010042	RIOK3	100	98.459	Bos_taurus
ENSCHIG00000009312	RIOK3	93	35.542	WBGene00014012	riok-3	91	35.542	Caenorhabditis_elegans
ENSCHIG00000009312	RIOK3	100	97.303	ENSCJAG00000020556	RIOK3	100	97.303	Callithrix_jacchus
ENSCHIG00000009312	RIOK3	100	97.688	ENSCAFG00000018201	RIOK3	100	97.688	Canis_familiaris
ENSCHIG00000009312	RIOK3	99	97.992	ENSCAFG00020014801	RIOK3	99	97.810	Canis_lupus_dingo
ENSCHIG00000009312	RIOK3	100	96.917	ENSTSYG00000000142	RIOK3	100	96.917	Carlito_syrichta
ENSCHIG00000009312	RIOK3	92	96.304	ENSCAPG00000005756	RIOK3	95	96.304	Cavia_aperea
ENSCHIG00000009312	RIOK3	100	95.568	ENSCPOG00000007991	RIOK3	100	95.568	Cavia_porcellus
ENSCHIG00000009312	RIOK3	100	97.110	ENSCCAG00000028338	RIOK3	98	96.640	Cebus_capucinus
ENSCHIG00000009312	RIOK3	100	96.146	ENSCATG00000040824	RIOK3	100	96.146	Cercocebus_atys
ENSCHIG00000009312	RIOK3	99	96.109	ENSCLAG00000006767	RIOK3	99	96.109	Chinchilla_lanigera
ENSCHIG00000009312	RIOK3	100	96.532	ENSCSAG00000017680	RIOK3	100	96.532	Chlorocebus_sabaeus
ENSCHIG00000009312	RIOK3	87	97.417	ENSCHOG00000008343	RIOK3	87	97.417	Choloepus_hoffmanni
ENSCHIG00000009312	RIOK3	99	87.400	ENSCPBG00000027226	RIOK3	100	86.207	Chrysemys_picta_bellii
ENSCHIG00000009312	RIOK3	97	49.343	ENSCSAVG00000003068	-	100	51.844	Ciona_savignyi
ENSCHIG00000009312	RIOK3	95	81.818	ENSCANG00000035939	RIOK3	95	97.554	Colobus_angolensis_palliatus
ENSCHIG00000009312	RIOK3	100	94.605	ENSCGRG00001013249	Riok3	100	94.605	Cricetulus_griseus_chok1gshd
ENSCHIG00000009312	RIOK3	100	94.220	ENSCGRG00000017636	Riok3	100	94.220	Cricetulus_griseus_crigri
ENSCHIG00000009312	RIOK3	98	72.233	ENSCSEG00000018289	riok3	99	72.407	Cynoglossus_semilaevis
ENSCHIG00000009312	RIOK3	98	73.038	ENSCVAG00000011848	riok3	97	72.946	Cyprinodon_variegatus
ENSCHIG00000009312	RIOK3	98	73.705	ENSDARG00000042751	riok3	99	71.565	Danio_rerio
ENSCHIG00000009312	RIOK3	100	96.917	ENSDNOG00000039433	RIOK3	100	96.917	Dasypus_novemcinctus
ENSCHIG00000009312	RIOK3	100	96.532	ENSDORG00000011663	Riok3	100	96.532	Dipodomys_ordii
ENSCHIG00000009312	RIOK3	90	42.136	FBgn0031643	CG3008	84	43.164	Drosophila_melanogaster
ENSCHIG00000009312	RIOK3	93	94.628	ENSETEG00000003689	RIOK3	100	94.628	Echinops_telfairi
ENSCHIG00000009312	RIOK3	97	53.722	ENSEBUG00000000555	riok3	96	53.815	Eptatretus_burgeri
ENSCHIG00000009312	RIOK3	100	95.761	ENSEASG00005002317	RIOK3	100	95.761	Equus_asinus_asinus
ENSCHIG00000009312	RIOK3	100	95.376	ENSECAG00000009028	RIOK3	100	95.376	Equus_caballus
ENSCHIG00000009312	RIOK3	99	77.510	ENSEEUG00000007005	RIOK3	100	77.510	Erinaceus_europaeus
ENSCHIG00000009312	RIOK3	99	74.950	ENSELUG00000017655	riok3	99	74.409	Esox_lucius
ENSCHIG00000009312	RIOK3	100	98.266	ENSFCAG00000000517	RIOK3	100	98.266	Felis_catus
ENSCHIG00000009312	RIOK3	99	87.000	ENSFALG00000006145	RIOK3	99	85.714	Ficedula_albicollis
ENSCHIG00000009312	RIOK3	100	94.027	ENSFDAG00000001548	RIOK3	100	94.027	Fukomys_damarensis
ENSCHIG00000009312	RIOK3	96	74.691	ENSFHEG00000011350	riok3	96	73.695	Fundulus_heteroclitus
ENSCHIG00000009312	RIOK3	91	71.800	ENSGMOG00000005157	riok3	98	71.800	Gadus_morhua
ENSCHIG00000009312	RIOK3	99	86.800	ENSGALG00000015004	RIOK3	99	85.714	Gallus_gallus
ENSCHIG00000009312	RIOK3	92	64.592	ENSGAFG00000002403	riok3	88	64.592	Gambusia_affinis
ENSCHIG00000009312	RIOK3	99	71.968	ENSGACG00000000880	riok3	97	71.968	Gasterosteus_aculeatus
ENSCHIG00000009312	RIOK3	99	86.000	ENSGAGG00000024785	RIOK3	100	84.483	Gopherus_agassizii
ENSCHIG00000009312	RIOK3	58	95.205	ENSGGOG00000036734	-	94	95.205	Gorilla_gorilla
ENSCHIG00000009312	RIOK3	98	73.589	ENSHBUG00000003233	riok3	97	73.069	Haplochromis_burtoni
ENSCHIG00000009312	RIOK3	100	94.412	ENSHGLG00000003885	RIOK3	100	94.412	Heterocephalus_glaber_female
ENSCHIG00000009312	RIOK3	100	94.412	ENSHGLG00100002077	RIOK3	100	94.412	Heterocephalus_glaber_male
ENSCHIG00000009312	RIOK3	98	73.642	ENSHCOG00000006794	riok3	95	73.642	Hippocampus_comes
ENSCHIG00000009312	RIOK3	98	73.333	ENSIPUG00000001406	Riok3	97	73.333	Ictalurus_punctatus
ENSCHIG00000009312	RIOK3	100	96.724	ENSSTOG00000006517	RIOK3	100	96.724	Ictidomys_tridecemlineatus
ENSCHIG00000009312	RIOK3	100	95.420	ENSJJAG00000023689	Riok3	100	95.420	Jaculus_jaculus
ENSCHIG00000009312	RIOK3	99	71.992	ENSKMAG00000007259	riok3	99	71.992	Kryptolebias_marmoratus
ENSCHIG00000009312	RIOK3	98	72.435	ENSLBEG00000013689	riok3	99	71.042	Labrus_bergylta
ENSCHIG00000009312	RIOK3	99	76.258	ENSLACG00000017326	RIOK3	99	74.806	Latimeria_chalumnae
ENSCHIG00000009312	RIOK3	99	78.715	ENSLOCG00000001652	riok3	100	76.923	Lepisosteus_oculatus
ENSCHIG00000009312	RIOK3	100	94.038	ENSLAFG00000001380	RIOK3	100	94.038	Loxodonta_africana
ENSCHIG00000009312	RIOK3	100	96.339	ENSMMUG00000021478	RIOK3	100	96.339	Macaca_mulatta
ENSCHIG00000009312	RIOK3	90	96.193	ENSMNEG00000041106	RIOK3	100	96.193	Macaca_nemestrina
ENSCHIG00000009312	RIOK3	100	96.532	ENSMLEG00000028187	RIOK3	100	96.532	Mandrillus_leucophaeus
ENSCHIG00000009312	RIOK3	99	72.600	ENSMAMG00000008502	riok3	97	72.745	Mastacembelus_armatus
ENSCHIG00000009312	RIOK3	98	73.589	ENSMZEG00005020212	riok3	97	73.069	Maylandia_zebra
ENSCHIG00000009312	RIOK3	99	86.600	ENSMGAG00000010079	RIOK3	100	84.291	Meleagris_gallopavo
ENSCHIG00000009312	RIOK3	99	95.766	ENSMAUG00000020527	Riok3	99	95.164	Mesocricetus_auratus
ENSCHIG00000009312	RIOK3	100	97.495	ENSMICG00000009293	RIOK3	99	97.282	Microcebus_murinus
ENSCHIG00000009312	RIOK3	99	93.786	ENSMOCG00000012114	Riok3	96	93.786	Microtus_ochrogaster
ENSCHIG00000009312	RIOK3	96	71.458	ENSMMOG00000019204	riok3	98	71.458	Mola_mola
ENSCHIG00000009312	RIOK3	99	93.186	ENSMODG00000021496	RIOK3	100	91.923	Monodelphis_domestica
ENSCHIG00000009312	RIOK3	99	72.800	ENSMALG00000020848	riok3	97	72.800	Monopterus_albus
ENSCHIG00000009312	RIOK3	99	95.354	MGP_CAROLIEiJ_G0022001	Riok3	99	95.155	Mus_caroli
ENSCHIG00000009312	RIOK3	99	95.960	ENSMUSG00000024404	Riok3	98	100.000	Mus_musculus
ENSCHIG00000009312	RIOK3	99	96.162	MGP_PahariEiJ_G0018739	Riok3	99	95.930	Mus_pahari
ENSCHIG00000009312	RIOK3	100	97.881	ENSMPUG00000005772	RIOK3	100	97.881	Mustela_putorius_furo
ENSCHIG00000009312	RIOK3	99	95.171	ENSMLUG00000007081	RIOK3	99	94.788	Myotis_lucifugus
ENSCHIG00000009312	RIOK3	99	95.534	ENSNGAG00000011446	Riok3	99	95.534	Nannospalax_galili
ENSCHIG00000009312	RIOK3	78	73.558	ENSNBRG00000016677	riok3	83	73.558	Neolamprologus_brichardi
ENSCHIG00000009312	RIOK3	100	96.724	ENSNLEG00000006758	RIOK3	100	96.724	Nomascus_leucogenys
ENSCHIG00000009312	RIOK3	99	92.786	ENSMEUG00000006292	RIOK3	100	91.538	Notamacropus_eugenii
ENSCHIG00000009312	RIOK3	100	95.376	ENSOPRG00000004803	RIOK3	100	95.376	Ochotona_princeps
ENSCHIG00000009312	RIOK3	100	94.412	ENSODEG00000006444	RIOK3	100	94.412	Octodon_degus
ENSCHIG00000009312	RIOK3	98	73.054	ENSONIG00000013422	riok3	99	73.054	Oreochromis_niloticus
ENSCHIG00000009312	RIOK3	97	89.592	ENSOANG00000012074	RIOK3	100	89.592	Ornithorhynchus_anatinus
ENSCHIG00000009312	RIOK3	100	96.339	ENSOCUG00000016820	RIOK3	100	96.339	Oryctolagus_cuniculus
ENSCHIG00000009312	RIOK3	99	72.837	ENSORLG00000003395	riok3	99	72.332	Oryzias_latipes
ENSCHIG00000009312	RIOK3	99	73.038	ENSORLG00020000672	riok3	99	72.530	Oryzias_latipes_hni
ENSCHIG00000009312	RIOK3	99	72.837	ENSORLG00015007372	riok3	99	72.332	Oryzias_latipes_hsok
ENSCHIG00000009312	RIOK3	99	72.837	ENSOMEG00000001380	riok3	98	72.565	Oryzias_melastigma
ENSCHIG00000009312	RIOK3	100	97.303	ENSOGAG00000014502	RIOK3	90	97.303	Otolemur_garnettii
ENSCHIG00000009312	RIOK3	100	99.807	ENSOARG00000008042	RIOK3	100	99.807	Ovis_aries
ENSCHIG00000009312	RIOK3	100	96.532	ENSPPAG00000030258	RIOK3	100	96.532	Pan_paniscus
ENSCHIG00000009312	RIOK3	100	98.266	ENSPPRG00000023302	RIOK3	100	98.266	Panthera_pardus
ENSCHIG00000009312	RIOK3	100	98.459	ENSPTIG00000000960	RIOK3	100	98.459	Panthera_tigris_altaica
ENSCHIG00000009312	RIOK3	100	96.339	ENSPTRG00000009918	RIOK3	100	96.339	Pan_troglodytes
ENSCHIG00000009312	RIOK3	100	96.532	ENSPANG00000011485	RIOK3	100	96.532	Papio_anubis
ENSCHIG00000009312	RIOK3	99	77.309	ENSPKIG00000018297	riok3	98	77.046	Paramormyrops_kingsleyae
ENSCHIG00000009312	RIOK3	99	85.600	ENSPSIG00000006250	RIOK3	100	84.069	Pelodiscus_sinensis
ENSCHIG00000009312	RIOK3	95	72.917	ENSPMGG00000009414	riok3	99	72.917	Periophthalmus_magnuspinnatus
ENSCHIG00000009312	RIOK3	100	94.220	ENSPEMG00000023794	Riok3	100	94.220	Peromyscus_maniculatus_bairdii
ENSCHIG00000009312	RIOK3	86	72.055	ENSPMAG00000003258	riok3	97	72.055	Petromyzon_marinus
ENSCHIG00000009312	RIOK3	96	92.531	ENSPCIG00000013991	RIOK3	100	92.531	Phascolarctos_cinereus
ENSCHIG00000009312	RIOK3	96	73.760	ENSPFOG00000024127	riok3	97	72.691	Poecilia_formosa
ENSCHIG00000009312	RIOK3	96	73.967	ENSPLAG00000004956	riok3	97	72.892	Poecilia_latipinna
ENSCHIG00000009312	RIOK3	96	74.227	ENSPMEG00000020108	riok3	97	73.146	Poecilia_mexicana
ENSCHIG00000009312	RIOK3	99	72.167	ENSPREG00000010010	riok3	98	72.079	Poecilia_reticulata
ENSCHIG00000009312	RIOK3	100	90.173	ENSPPYG00000009062	RIOK3	100	90.173	Pongo_abelii
ENSCHIG00000009312	RIOK3	75	95.618	ENSPCAG00000001021	RIOK3	74	95.618	Procavia_capensis
ENSCHIG00000009312	RIOK3	100	97.688	ENSPCOG00000022631	RIOK3	100	97.688	Propithecus_coquereli
ENSCHIG00000009312	RIOK3	100	82.852	ENSPVAG00000015817	RIOK3	100	82.852	Pteropus_vampyrus
ENSCHIG00000009312	RIOK3	98	73.589	ENSPNYG00000003271	riok3	97	73.069	Pundamilia_nyererei
ENSCHIG00000009312	RIOK3	99	74.802	ENSPNAG00000006213	riok3	97	74.802	Pygocentrus_nattereri
ENSCHIG00000009312	RIOK3	100	94.990	ENSRNOG00000023376	Riok3	100	94.990	Rattus_norvegicus
ENSCHIG00000009312	RIOK3	100	96.146	ENSRBIG00000035071	RIOK3	100	96.146	Rhinopithecus_bieti
ENSCHIG00000009312	RIOK3	100	95.954	ENSRROG00000045710	RIOK3	100	95.954	Rhinopithecus_roxellana
ENSCHIG00000009312	RIOK3	100	97.303	ENSSBOG00000034387	RIOK3	100	97.303	Saimiri_boliviensis_boliviensis
ENSCHIG00000009312	RIOK3	99	93.186	ENSSHAG00000011854	RIOK3	100	92.115	Sarcophilus_harrisii
ENSCHIG00000009312	RIOK3	99	76.104	ENSSFOG00015012912	riok3	98	76.104	Scleropages_formosus
ENSCHIG00000009312	RIOK3	99	73.253	ENSSMAG00000011527	riok3	99	71.319	Scophthalmus_maximus
ENSCHIG00000009312	RIOK3	99	74.052	ENSSDUG00000016018	riok3	97	74.400	Seriola_dumerili
ENSCHIG00000009312	RIOK3	60	81.707	ENSSLDG00000022246	riok3	93	77.222	Seriola_lalandi_dorsalis
ENSCHIG00000009312	RIOK3	87	98.155	ENSSARG00000010154	RIOK3	87	98.155	Sorex_araneus
ENSCHIG00000009312	RIOK3	98	87.879	ENSSPUG00000015246	RIOK3	98	86.355	Sphenodon_punctatus
ENSCHIG00000009312	RIOK3	98	73.896	ENSSPAG00000000601	riok3	99	72.447	Stegastes_partitus
ENSCHIG00000009312	RIOK3	100	98.073	ENSSSCG00000029518	RIOK3	100	98.611	Sus_scrofa
ENSCHIG00000009312	RIOK3	99	86.800	ENSTGUG00000010392	RIOK3	100	85.277	Taeniopygia_guttata
ENSCHIG00000009312	RIOK3	98	72.691	ENSTRUG00000007055	riok3	99	70.577	Takifugu_rubripes
ENSCHIG00000009312	RIOK3	96	67.901	ENSTNIG00000001855	riok3	99	67.901	Tetraodon_nigroviridis
ENSCHIG00000009312	RIOK3	56	100.000	ENSTBEG00000015851	RIOK3	55	100.000	Tupaia_belangeri
ENSCHIG00000009312	RIOK3	100	96.724	ENSTTRG00000008839	RIOK3	100	96.724	Tursiops_truncatus
ENSCHIG00000009312	RIOK3	100	97.303	ENSUAMG00000018410	RIOK3	100	97.303	Ursus_americanus
ENSCHIG00000009312	RIOK3	100	96.532	ENSUMAG00000020218	RIOK3	97	97.456	Ursus_maritimus
ENSCHIG00000009312	RIOK3	100	97.881	ENSVPAG00000009034	RIOK3	100	97.881	Vicugna_pacos
ENSCHIG00000009312	RIOK3	100	97.688	ENSVVUG00000003651	RIOK3	76	97.688	Vulpes_vulpes
ENSCHIG00000009312	RIOK3	99	77.154	ENSXETG00000027370	riok3	100	75.385	Xenopus_tropicalis
ENSCHIG00000009312	RIOK3	98	72.837	ENSXCOG00000001032	riok3	99	72.837	Xiphophorus_couchianus
ENSCHIG00000009312	RIOK3	98	73.185	ENSXMAG00000012902	riok3	97	73.092	Xiphophorus_maculatus