EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000009398 (Gene tree)
Gene ID: 102177121
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 369 bases
Position: chr3:11339303-11339671
Accession: 102177121
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000005271	LSM	PF01423.22	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000012907	LSM10-201	369	XM_018041751	ENSCHIP00000005271	122 (aa)	XP_017897240	UPI00005BC32A

Gene Model

Click here to download ENSCHIG00000009398's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000009398's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000009398	LSM10	100	90.164	ENSG00000181817	LSM10	99	90.164	Homo_sapiens
ENSCHIG00000009398	LSM10	98	93.333	ENSAMEG00000019854	LSM10	98	93.333	Ailuropoda_melanoleuca
ENSCHIG00000009398	LSM10	96	64.957	ENSACIG00000015420	oscp1a	77	64.957	Amphilophus_citrinellus
ENSCHIG00000009398	LSM10	96	62.393	ENSAOCG00000015607	LSM10	91	62.393	Amphiprion_ocellaris
ENSCHIG00000009398	LSM10	97	67.797	ENSAOCG00000015618	LSM10	98	67.797	Amphiprion_ocellaris
ENSCHIG00000009398	LSM10	97	67.797	ENSAOCG00000014654	-	98	67.797	Amphiprion_ocellaris
ENSCHIG00000009398	LSM10	97	67.797	ENSAPEG00000021845	-	98	67.797	Amphiprion_percula
ENSCHIG00000009398	LSM10	96	62.393	ENSAPEG00000021851	LSM10	91	62.393	Amphiprion_percula
ENSCHIG00000009398	LSM10	95	62.069	ENSATEG00000006310	oscp1a	86	62.069	Anabas_testudineus
ENSCHIG00000009398	LSM10	96	70.085	ENSACAG00000001231	LSM10	95	70.085	Anolis_carolinensis
ENSCHIG00000009398	LSM10	100	90.164	ENSANAG00000031489	-	100	90.164	Aotus_nancymaae
ENSCHIG00000009398	LSM10	100	91.803	ENSANAG00000018759	-	99	91.803	Aotus_nancymaae
ENSCHIG00000009398	LSM10	97	66.102	ENSACLG00000004728	oscp1a	96	66.102	Astatotilapia_calliptera
ENSCHIG00000009398	LSM10	98	66.387	ENSAMXG00000025301	oscp1a	98	66.387	Astyanax_mexicanus
ENSCHIG00000009398	LSM10	100	100.000	ENSBTAG00000024096	LSM10	100	100.000	Bos_taurus
ENSCHIG00000009398	LSM10	100	90.984	ENSCJAG00000044880	LSM10	99	90.984	Callithrix_jacchus
ENSCHIG00000009398	LSM10	98	95.000	ENSCAFG00000003382	LSM10	98	95.000	Canis_familiaris
ENSCHIG00000009398	LSM10	98	95.000	ENSCAFG00020008920	LSM10	98	95.000	Canis_lupus_dingo
ENSCHIG00000009398	LSM10	98	93.333	ENSCAPG00000012567	LSM10	98	93.333	Cavia_aperea
ENSCHIG00000009398	LSM10	98	93.333	ENSCPOG00000039302	LSM10	98	93.333	Cavia_porcellus
ENSCHIG00000009398	LSM10	100	91.803	ENSCCAG00000018913	-	99	91.803	Cebus_capucinus
ENSCHIG00000009398	LSM10	100	90.164	ENSCCAG00000008378	-	99	90.164	Cebus_capucinus
ENSCHIG00000009398	LSM10	99	90.909	ENSCATG00000006589	LSM10	98	90.909	Cercocebus_atys
ENSCHIG00000009398	LSM10	98	95.000	ENSCLAG00000008633	LSM10	98	95.000	Chinchilla_lanigera
ENSCHIG00000009398	LSM10	99	90.909	ENSCSAG00000000134	LSM10	98	90.909	Chlorocebus_sabaeus
ENSCHIG00000009398	LSM10	98	90.984	ENSCHOG00000008615	LSM10	98	90.984	Choloepus_hoffmanni
ENSCHIG00000009398	LSM10	84	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSCHIG00000009398	LSM10	99	90.909	ENSCANG00000019928	LSM10	98	90.909	Colobus_angolensis_palliatus
ENSCHIG00000009398	LSM10	93	81.034	ENSCGRG00001022673	-	93	81.034	Cricetulus_griseus_chok1gshd
ENSCHIG00000009398	LSM10	98	90.000	ENSCGRG00001004317	-	98	90.000	Cricetulus_griseus_chok1gshd
ENSCHIG00000009398	LSM10	93	81.034	ENSCGRG00000015514	-	93	81.034	Cricetulus_griseus_crigri
ENSCHIG00000009398	LSM10	98	90.000	ENSCGRG00000014935	-	98	90.000	Cricetulus_griseus_crigri
ENSCHIG00000009398	LSM10	98	61.667	ENSCSEG00000010374	oscp1a	81	61.667	Cynoglossus_semilaevis
ENSCHIG00000009398	LSM10	98	63.025	ENSCVAG00000001536	oscp1a	90	63.025	Cyprinodon_variegatus
ENSCHIG00000009398	LSM10	98	70.000	ENSDARG00000101222	oscp1a	99	70.000	Danio_rerio
ENSCHIG00000009398	LSM10	70	70.588	ENSDARG00000109563	CABZ01074453.1	99	70.588	Danio_rerio
ENSCHIG00000009398	LSM10	99	92.562	ENSDNOG00000036662	LSM10	98	92.562	Dasypus_novemcinctus
ENSCHIG00000009398	LSM10	98	90.833	ENSDORG00000007579	Lsm10	98	90.833	Dipodomys_ordii
ENSCHIG00000009398	LSM10	98	90.833	ENSETEG00000005703	LSM10	98	90.833	Echinops_telfairi
ENSCHIG00000009398	LSM10	92	52.679	ENSEBUG00000001312	oscp1a	92	52.679	Eptatretus_burgeri
ENSCHIG00000009398	LSM10	98	93.333	ENSEASG00005012194	LSM10	98	93.333	Equus_asinus_asinus
ENSCHIG00000009398	LSM10	98	94.167	ENSECAG00000005071	LSM10	98	94.167	Equus_caballus
ENSCHIG00000009398	LSM10	98	91.667	ENSEEUG00000012032	LSM10	98	91.667	Erinaceus_europaeus
ENSCHIG00000009398	LSM10	100	66.393	ENSELUG00000007452	oscp1a	100	66.393	Esox_lucius
ENSCHIG00000009398	LSM10	96	73.504	ENSFALG00000000851	LSM10	95	73.504	Ficedula_albicollis
ENSCHIG00000009398	LSM10	98	92.500	ENSFDAG00000021056	LSM10	98	92.500	Fukomys_damarensis
ENSCHIG00000009398	LSM10	89	67.273	ENSFHEG00000001058	oscp1a	95	67.273	Fundulus_heteroclitus
ENSCHIG00000009398	LSM10	93	63.478	ENSGMOG00000019832	oscp1a	97	63.478	Gadus_morhua
ENSCHIG00000009398	LSM10	97	76.271	ENSGALG00000002127	LSM10	96	76.271	Gallus_gallus
ENSCHIG00000009398	LSM10	99	57.258	ENSGAFG00000016445	oscp1a	98	57.258	Gambusia_affinis
ENSCHIG00000009398	LSM10	98	63.866	ENSGACG00000002329	oscp1a	98	63.866	Gasterosteus_aculeatus
ENSCHIG00000009398	LSM10	98	75.630	ENSGAGG00000024848	LSM10	97	75.630	Gopherus_agassizii
ENSCHIG00000009398	LSM10	100	90.984	ENSGGOG00000003556	LSM10	99	90.984	Gorilla_gorilla
ENSCHIG00000009398	LSM10	97	66.102	ENSHBUG00000001722	oscp1a	96	66.102	Haplochromis_burtoni
ENSCHIG00000009398	LSM10	98	92.500	ENSHGLG00000011625	LSM10	98	92.500	Heterocephalus_glaber_female
ENSCHIG00000009398	LSM10	98	92.500	ENSHGLG00100001769	LSM10	98	92.500	Heterocephalus_glaber_male
ENSCHIG00000009398	LSM10	87	67.925	ENSIPUG00000005808	oscp1a	92	67.925	Ictalurus_punctatus
ENSCHIG00000009398	LSM10	98	95.000	ENSSTOG00000000606	LSM10	98	95.000	Ictidomys_tridecemlineatus
ENSCHIG00000009398	LSM10	97	63.559	ENSKMAG00000012143	oscp1a	98	63.559	Kryptolebias_marmoratus
ENSCHIG00000009398	LSM10	98	61.667	ENSLBEG00000017764	oscp1a	98	61.667	Labrus_bergylta
ENSCHIG00000009398	LSM10	98	72.269	ENSLACG00000015904	LSM10	92	72.269	Latimeria_chalumnae
ENSCHIG00000009398	LSM10	98	68.333	ENSLOCG00000018277	oscp1a	98	68.333	Lepisosteus_oculatus
ENSCHIG00000009398	LSM10	99	92.562	ENSLAFG00000009600	LSM10	98	92.562	Loxodonta_africana
ENSCHIG00000009398	LSM10	99	90.909	ENSMFAG00000009115	LSM10	98	90.909	Macaca_fascicularis
ENSCHIG00000009398	LSM10	99	90.909	ENSMMUG00000017338	LSM10	98	90.909	Macaca_mulatta
ENSCHIG00000009398	LSM10	99	90.909	ENSMNEG00000020023	LSM10	98	90.909	Macaca_nemestrina
ENSCHIG00000009398	LSM10	99	90.909	ENSMLEG00000025150	LSM10	98	90.909	Mandrillus_leucophaeus
ENSCHIG00000009398	LSM10	100	63.115	ENSMAMG00000004427	oscp1a	100	63.115	Mastacembelus_armatus
ENSCHIG00000009398	LSM10	97	66.102	ENSMZEG00005026307	oscp1a	96	66.102	Maylandia_zebra
ENSCHIG00000009398	LSM10	97	76.271	ENSMGAG00000015707	LSM10	96	76.271	Meleagris_gallopavo
ENSCHIG00000009398	LSM10	98	88.333	ENSMAUG00000016624	Lsm10	98	88.333	Mesocricetus_auratus
ENSCHIG00000009398	LSM10	98	89.167	ENSMOCG00000021943	Lsm10	98	89.167	Microtus_ochrogaster
ENSCHIG00000009398	LSM10	94	65.217	ENSMMOG00000013597	oscp1a	86	65.217	Mola_mola
ENSCHIG00000009398	LSM10	99	82.645	ENSMODG00000023328	LSM10	98	82.645	Monodelphis_domestica
ENSCHIG00000009398	LSM10	60	57.692	ENSMALG00000012661	oscp1a	61	57.692	Monopterus_albus
ENSCHIG00000009398	LSM10	98	90.000	MGP_CAROLIEiJ_G0026467	Lsm10	100	91.398	Mus_caroli
ENSCHIG00000009398	LSM10	98	90.833	ENSMUSG00000050188	Lsm10	100	92.473	Mus_musculus
ENSCHIG00000009398	LSM10	98	90.833	MGP_PahariEiJ_G0028798	Lsm10	100	92.473	Mus_pahari
ENSCHIG00000009398	LSM10	98	90.833	MGP_SPRETEiJ_G0027446	Lsm10	100	92.473	Mus_spretus
ENSCHIG00000009398	LSM10	98	95.000	ENSMPUG00000018593	LSM10	98	95.000	Mustela_putorius_furo
ENSCHIG00000009398	LSM10	98	89.167	ENSMLUG00000023895	LSM10	98	89.167	Myotis_lucifugus
ENSCHIG00000009398	LSM10	98	92.500	ENSNGAG00000015011	Lsm10	98	92.500	Nannospalax_galili
ENSCHIG00000009398	LSM10	98	66.387	ENSNBRG00000014306	oscp1a	97	66.387	Neolamprologus_brichardi
ENSCHIG00000009398	LSM10	100	91.803	ENSNLEG00000033754	LSM10	99	91.803	Nomascus_leucogenys
ENSCHIG00000009398	LSM10	99	82.645	ENSMEUG00000006313	LSM10	98	82.645	Notamacropus_eugenii
ENSCHIG00000009398	LSM10	98	90.833	ENSOPRG00000001699	LSM10	98	90.833	Ochotona_princeps
ENSCHIG00000009398	LSM10	98	95.000	ENSODEG00000019161	LSM10	98	95.000	Octodon_degus
ENSCHIG00000009398	LSM10	98	66.667	ENSONIG00000020904	oscp1a	98	66.667	Oreochromis_niloticus
ENSCHIG00000009398	LSM10	100	77.869	ENSOANG00000002066	LSM10	99	77.869	Ornithorhynchus_anatinus
ENSCHIG00000009398	LSM10	98	90.000	ENSOCUG00000005333	LSM10	98	90.000	Oryctolagus_cuniculus
ENSCHIG00000009398	LSM10	98	62.500	ENSORLG00000009504	oscp1a	99	62.500	Oryzias_latipes
ENSCHIG00000009398	LSM10	98	62.500	ENSORLG00020016201	oscp1a	99	62.500	Oryzias_latipes_hni
ENSCHIG00000009398	LSM10	97	64.407	ENSORLG00015007794	oscp1a	97	64.407	Oryzias_latipes_hsok
ENSCHIG00000009398	LSM10	98	92.500	ENSOGAG00000002653	LSM10	98	92.500	Otolemur_garnettii
ENSCHIG00000009398	LSM10	100	100.000	ENSOARG00000009596	LSM10	100	100.000	Ovis_aries
ENSCHIG00000009398	LSM10	100	90.164	ENSPPAG00000023465	LSM10	99	90.164	Pan_paniscus
ENSCHIG00000009398	LSM10	98	93.333	ENSPPRG00000014619	LSM10	98	93.333	Panthera_pardus
ENSCHIG00000009398	LSM10	98	93.333	ENSPTIG00000004613	LSM10	98	93.333	Panthera_tigris_altaica
ENSCHIG00000009398	LSM10	100	90.164	ENSPTRG00000000539	LSM10	99	90.164	Pan_troglodytes
ENSCHIG00000009398	LSM10	99	90.909	ENSPANG00000023172	LSM10	98	90.909	Papio_anubis
ENSCHIG00000009398	LSM10	98	65.833	ENSPKIG00000003728	oscp1a	97	65.833	Paramormyrops_kingsleyae
ENSCHIG00000009398	LSM10	98	73.950	ENSPSIG00000000590	LSM10	97	73.950	Pelodiscus_sinensis
ENSCHIG00000009398	LSM10	63	64.935	ENSPMGG00000015718	oscp1a	100	64.935	Periophthalmus_magnuspinnatus
ENSCHIG00000009398	LSM10	84	85.437	ENSPCIG00000014865	LSM10	76	85.437	Phascolarctos_cinereus
ENSCHIG00000009398	LSM10	95	63.793	ENSPFOG00000020490	oscp1a	98	63.793	Poecilia_formosa
ENSCHIG00000009398	LSM10	95	63.793	ENSPLAG00000016537	oscp1a	89	63.793	Poecilia_latipinna
ENSCHIG00000009398	LSM10	93	65.487	ENSPMEG00000000174	oscp1a	97	65.487	Poecilia_mexicana
ENSCHIG00000009398	LSM10	99	61.983	ENSPREG00000009899	oscp1a	92	61.983	Poecilia_reticulata
ENSCHIG00000009398	LSM10	100	90.984	ENSPPYG00000001539	LSM10	99	90.984	Pongo_abelii
ENSCHIG00000009398	LSM10	100	90.984	ENSPCAG00000002520	LSM10	99	90.984	Procavia_capensis
ENSCHIG00000009398	LSM10	98	92.500	ENSPVAG00000008644	LSM10	98	92.500	Pteropus_vampyrus
ENSCHIG00000009398	LSM10	97	66.102	ENSPNYG00000003138	oscp1a	96	66.102	Pundamilia_nyererei
ENSCHIG00000009398	LSM10	97	65.254	ENSPNAG00000028829	oscp1a	98	65.254	Pygocentrus_nattereri
ENSCHIG00000009398	LSM10	98	91.667	ENSRNOG00000025716	Lsm10	98	91.667	Rattus_norvegicus
ENSCHIG00000009398	LSM10	99	90.909	ENSRBIG00000001561	LSM10	98	90.909	Rhinopithecus_bieti
ENSCHIG00000009398	LSM10	99	90.909	ENSRROG00000011414	LSM10	98	90.909	Rhinopithecus_roxellana
ENSCHIG00000009398	LSM10	100	91.803	ENSSBOG00000036413	-	99	91.803	Saimiri_boliviensis_boliviensis
ENSCHIG00000009398	LSM10	99	82.645	ENSSHAG00000018056	LSM10	98	82.645	Sarcophilus_harrisii
ENSCHIG00000009398	LSM10	100	66.393	ENSSFOG00015019954	lsm10	100	66.393	Scleropages_formosus
ENSCHIG00000009398	LSM10	94	65.217	ENSSMAG00000001297	oscp1a	98	65.217	Scophthalmus_maximus
ENSCHIG00000009398	LSM10	100	63.415	ENSSDUG00000007090	oscp1a	100	63.415	Seriola_dumerili
ENSCHIG00000009398	LSM10	97	64.407	ENSSLDG00000000800	oscp1a	98	64.407	Seriola_lalandi_dorsalis
ENSCHIG00000009398	LSM10	98	88.525	ENSSARG00000004211	LSM10	98	90.164	Sorex_araneus
ENSCHIG00000009398	LSM10	95	65.517	ENSSPAG00000009229	oscp1a	96	65.517	Stegastes_partitus
ENSCHIG00000009398	LSM10	100	91.803	ENSSSCG00000038916	LSM10	99	91.803	Sus_scrofa
ENSCHIG00000009398	LSM10	97	73.729	ENSTGUG00000001600	-	97	73.729	Taeniopygia_guttata
ENSCHIG00000009398	LSM10	97	73.729	ENSTGUG00000001602	-	97	73.729	Taeniopygia_guttata
ENSCHIG00000009398	LSM10	99	64.463	ENSTRUG00000010531	oscp1a	98	64.463	Takifugu_rubripes
ENSCHIG00000009398	LSM10	100	90.164	ENSTBEG00000016674	LSM10	99	90.164	Tupaia_belangeri
ENSCHIG00000009398	LSM10	98	92.500	ENSUAMG00000020265	LSM10	98	92.500	Ursus_americanus
ENSCHIG00000009398	LSM10	99	91.736	ENSUMAG00000001438	LSM10	56	91.736	Ursus_maritimus
ENSCHIG00000009398	LSM10	98	95.000	ENSVVUG00000023209	LSM10	98	95.000	Vulpes_vulpes
ENSCHIG00000009398	LSM10	99	71.074	ENSXETG00000027631	lsm10	98	71.074	Xenopus_tropicalis
ENSCHIG00000009398	LSM10	99	60.331	ENSXCOG00000018776	oscp1a	76	60.331	Xiphophorus_couchianus
ENSCHIG00000009398	LSM10	93	63.717	ENSXMAG00000019963	oscp1a	90	63.717	Xiphophorus_maculatus