EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000009518 (Gene tree)
Gene ID: 102179311
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 9866 bases
Position: chr18:47198075-47207940
Accession: 102179311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000005527	RRM_1	PF00076.22	7.1e-18	1	1
ENSCHIP00000005515	RRM_1	PF00076.22	7.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000013218	RBM42-202	3256	XM_018063367	ENSCHIP00000005527	448 (aa)	XP_017918856	UPI0008469894
ENSCHIT00000013206	RBM42-201	3343	XM_018063365	ENSCHIP00000005515	477 (aa)	XP_017918854	UPI0008474B4D

Gene Model

Click here to download ENSCHIG00000009518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000009518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000009518	RBM42	100	98.004	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSCHIG00000009518	RBM42	100	97.077	ENSAMEG00000000524	RBM42	100	97.077	Ailuropoda_melanoleuca
ENSCHIG00000009518	RBM42	100	97.275	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSCHIG00000009518	RBM42	100	99.161	ENSBTAG00000013440	RBM42	100	99.161	Bos_taurus
ENSCHIG00000009518	RBM42	100	98.661	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSCHIG00000009518	RBM42	100	91.741	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSCHIG00000009518	RBM42	100	97.280	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSCHIG00000009518	RBM42	81	96.891	ENSCAPG00000009566	RBM42	99	96.891	Cavia_aperea
ENSCHIG00000009518	RBM42	100	97.991	ENSCPOG00000012365	RBM42	99	97.991	Cavia_porcellus
ENSCHIG00000009518	RBM42	100	97.904	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSCHIG00000009518	RBM42	100	98.448	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSCHIG00000009518	RBM42	100	97.321	ENSCLAG00000012865	RBM42	99	97.321	Chinchilla_lanigera
ENSCHIG00000009518	RBM42	100	98.448	ENSCSAG00000004422	RBM42	100	98.448	Chlorocebus_sabaeus
ENSCHIG00000009518	RBM42	89	99.013	ENSCANG00000030272	RBM42	100	87.841	Colobus_angolensis_palliatus
ENSCHIG00000009518	RBM42	100	96.429	ENSCGRG00001018540	Rbm42	99	96.429	Cricetulus_griseus_chok1gshd
ENSCHIG00000009518	RBM42	100	96.896	ENSDNOG00000037397	RBM42	100	96.896	Dasypus_novemcinctus
ENSCHIG00000009518	RBM42	100	96.652	ENSDORG00000013001	Rbm42	99	96.652	Dipodomys_ordii
ENSCHIG00000009518	RBM42	76	94.203	ENSETEG00000007878	RBM42	74	94.203	Echinops_telfairi
ENSCHIG00000009518	RBM42	100	98.438	ENSEASG00005001074	RBM42	100	98.438	Equus_asinus_asinus
ENSCHIG00000009518	RBM42	100	98.438	ENSECAG00000018215	RBM42	100	98.438	Equus_caballus
ENSCHIG00000009518	RBM42	100	97.694	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSCHIG00000009518	RBM42	100	96.444	ENSFDAG00000007440	RBM42	99	96.444	Fukomys_damarensis
ENSCHIG00000009518	RBM42	100	98.226	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSCHIG00000009518	RBM42	100	95.536	ENSHGLG00000008418	RBM42	99	95.536	Heterocephalus_glaber_female
ENSCHIG00000009518	RBM42	100	95.536	ENSHGLG00100018667	RBM42	99	95.536	Heterocephalus_glaber_male
ENSCHIG00000009518	RBM42	100	98.214	ENSSTOG00000013050	RBM42	99	98.214	Ictidomys_tridecemlineatus
ENSCHIG00000009518	RBM42	100	96.429	ENSJJAG00000010421	Rbm42	99	96.429	Jaculus_jaculus
ENSCHIG00000009518	RBM42	98	92.521	ENSLAFG00000014993	RBM42	99	91.405	Loxodonta_africana
ENSCHIG00000009518	RBM42	100	98.448	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSCHIG00000009518	RBM42	100	97.991	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSCHIG00000009518	RBM42	100	98.448	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSCHIG00000009518	RBM42	100	98.226	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSCHIG00000009518	RBM42	100	97.904	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSCHIG00000009518	RBM42	100	96.205	ENSMOCG00000000405	Rbm42	99	96.205	Microtus_ochrogaster
ENSCHIG00000009518	RBM42	100	96.875	MGP_CAROLIEiJ_G0029536	Rbm42	99	96.875	Mus_caroli
ENSCHIG00000009518	RBM42	100	96.875	ENSMUSG00000036733	Rbm42	99	96.875	Mus_musculus
ENSCHIG00000009518	RBM42	100	96.875	MGP_PahariEiJ_G0012770	Rbm42	99	96.875	Mus_pahari
ENSCHIG00000009518	RBM42	100	96.875	MGP_SPRETEiJ_G0030632	Rbm42	99	96.875	Mus_spretus
ENSCHIG00000009518	RBM42	100	98.661	ENSMPUG00000006288	RBM42	100	98.661	Mustela_putorius_furo
ENSCHIG00000009518	RBM42	100	96.226	ENSMLUG00000011334	RBM42	100	96.226	Myotis_lucifugus
ENSCHIG00000009518	RBM42	100	96.205	ENSNGAG00000019698	Rbm42	99	96.205	Nannospalax_galili
ENSCHIG00000009518	RBM42	70	97.305	ENSNLEG00000011272	-	94	90.503	Nomascus_leucogenys
ENSCHIG00000009518	RBM42	96	81.128	ENSMEUG00000016300	RBM42	100	80.658	Notamacropus_eugenii
ENSCHIG00000009518	RBM42	100	92.872	ENSOPRG00000001229	RBM42	100	90.776	Ochotona_princeps
ENSCHIG00000009518	RBM42	100	97.545	ENSODEG00000013705	RBM42	99	97.545	Octodon_degus
ENSCHIG00000009518	RBM42	100	97.118	ENSOCUG00000003337	RBM42	100	97.118	Oryctolagus_cuniculus
ENSCHIG00000009518	RBM42	100	96.226	ENSOGAG00000004144	RBM42	100	96.226	Otolemur_garnettii
ENSCHIG00000009518	RBM42	98	91.221	ENSOARG00000004926	RBM42	98	94.538	Ovis_aries
ENSCHIG00000009518	RBM42	100	98.661	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSCHIG00000009518	RBM42	100	97.694	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSCHIG00000009518	RBM42	100	97.275	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSCHIG00000009518	RBM42	100	98.226	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSCHIG00000009518	RBM42	100	97.275	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSCHIG00000009518	RBM42	100	97.321	ENSPEMG00000012065	Rbm42	99	97.321	Peromyscus_maniculatus_bairdii
ENSCHIG00000009518	RBM42	100	96.495	ENSPPYG00000009871	RBM42	100	96.495	Pongo_abelii
ENSCHIG00000009518	RBM42	100	83.438	ENSPCAG00000013053	RBM42	100	81.761	Procavia_capensis
ENSCHIG00000009518	RBM42	100	97.904	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSCHIG00000009518	RBM42	70	96.997	ENSPCOG00000020672	RBM42	81	97.289	Propithecus_coquereli
ENSCHIG00000009518	RBM42	100	97.275	ENSPVAG00000012815	RBM42	100	97.275	Pteropus_vampyrus
ENSCHIG00000009518	RBM42	100	97.098	ENSRNOG00000024278	Rbm42	99	97.098	Rattus_norvegicus
ENSCHIG00000009518	RBM42	100	98.448	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSCHIG00000009518	RBM42	100	99.107	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSCHIG00000009518	RBM42	85	98.030	ENSSBOG00000030666	RBM42	100	98.030	Saimiri_boliviensis_boliviensis
ENSCHIG00000009518	RBM42	100	86.667	ENSSARG00000010724	RBM42	100	86.667	Sorex_araneus
ENSCHIG00000009518	RBM42	100	97.991	ENSSSCG00000002905	RBM42	100	97.991	Sus_scrofa
ENSCHIG00000009518	RBM42	100	97.991	ENSUAMG00000020711	RBM42	100	97.991	Ursus_americanus
ENSCHIG00000009518	RBM42	100	97.275	ENSUMAG00000020223	RBM42	100	97.275	Ursus_maritimus
ENSCHIG00000009518	RBM42	100	98.661	ENSVVUG00000015117	RBM42	100	98.661	Vulpes_vulpes