EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000009760 (Gene tree)
Gene ID: 108633368
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 11948 bases
Position: chr22:56285965-56297912
Accession: 108633368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000005716	MBD	PF01429.19	2.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000013413	MBD4-201	4784	XM_018038415	ENSCHIP00000005716	554 (aa)	XP_017893904	UPI000846D6E5

Gene Model

Click here to download ENSCHIG00000009760's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000009760's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000009760	MBD4	100	71.130	ENSG00000129071	MBD4	98	93.011	Homo_sapiens
ENSCHIG00000009760	MBD4	100	72.389	ENSAMEG00000004562	MBD4	99	72.389	Ailuropoda_melanoleuca
ENSCHIG00000009760	MBD4	55	61.290	ENSAOCG00000001157	mbd4	62	61.290	Amphiprion_ocellaris
ENSCHIG00000009760	MBD4	55	61.290	ENSAPEG00000016131	mbd4	62	61.290	Amphiprion_percula
ENSCHIG00000009760	MBD4	100	93.502	ENSBTAG00000021645	MBD4	100	93.502	Bos_taurus
ENSCHIG00000009760	MBD4	100	68.728	ENSCJAG00000017293	MBD4	99	68.728	Callithrix_jacchus
ENSCHIG00000009760	MBD4	100	74.074	ENSCAFG00000004867	MBD4	99	74.074	Canis_familiaris
ENSCHIG00000009760	MBD4	100	74.074	ENSCAFG00020007082	MBD4	99	74.074	Canis_lupus_dingo
ENSCHIG00000009760	MBD4	100	68.118	ENSCCAG00000029796	MBD4	99	68.118	Cebus_capucinus
ENSCHIG00000009760	MBD4	100	69.634	ENSCATG00000035211	MBD4	99	69.634	Cercocebus_atys
ENSCHIG00000009760	MBD4	100	63.351	ENSCLAG00000008974	MBD4	100	63.351	Chinchilla_lanigera
ENSCHIG00000009760	MBD4	100	69.983	ENSCSAG00000009037	MBD4	99	69.983	Chlorocebus_sabaeus
ENSCHIG00000009760	MBD4	94	48.951	ENSCPBG00000014704	MBD4	98	48.951	Chrysemys_picta_bellii
ENSCHIG00000009760	MBD4	100	69.634	ENSCANG00000007120	MBD4	99	69.634	Colobus_angolensis_palliatus
ENSCHIG00000009760	MBD4	100	63.380	ENSCGRG00001003507	Mbd4	100	63.908	Cricetulus_griseus_chok1gshd
ENSCHIG00000009760	MBD4	100	63.380	ENSCGRG00000010974	Mbd4	100	63.908	Cricetulus_griseus_crigri
ENSCHIG00000009760	MBD4	100	68.935	ENSDNOG00000049619	MBD4	100	68.935	Dasypus_novemcinctus
ENSCHIG00000009760	MBD4	81	59.227	ENSDORG00000000902	-	96	58.898	Dipodomys_ordii
ENSCHIG00000009760	MBD4	85	39.676	ENSEBUG00000010816	mbd4	98	39.676	Eptatretus_burgeri
ENSCHIG00000009760	MBD4	100	73.252	ENSEASG00005014800	MBD4	100	73.252	Equus_asinus_asinus
ENSCHIG00000009760	MBD4	100	73.252	ENSECAG00000022106	MBD4	100	73.252	Equus_caballus
ENSCHIG00000009760	MBD4	95	59.124	ENSEEUG00000011459	MBD4	99	59.124	Erinaceus_europaeus
ENSCHIG00000009760	MBD4	100	72.438	ENSFCAG00000000083	MBD4	99	72.438	Felis_catus
ENSCHIG00000009760	MBD4	82	45.299	ENSFALG00000013663	MBD4	99	45.248	Ficedula_albicollis
ENSCHIG00000009760	MBD4	55	60.494	ENSGMOG00000013830	mbd4	63	60.494	Gadus_morhua
ENSCHIG00000009760	MBD4	94	50.263	ENSGAGG00000018644	MBD4	98	50.263	Gopherus_agassizii
ENSCHIG00000009760	MBD4	100	70.087	ENSGGOG00000010698	MBD4	99	70.087	Gorilla_gorilla
ENSCHIG00000009760	MBD4	100	65.157	ENSHGLG00000009034	MBD4	100	65.157	Heterocephalus_glaber_female
ENSCHIG00000009760	MBD4	100	65.157	ENSHGLG00100000135	MBD4	100	65.157	Heterocephalus_glaber_male
ENSCHIG00000009760	MBD4	100	67.016	ENSSTOG00000020663	MBD4	100	67.016	Ictidomys_tridecemlineatus
ENSCHIG00000009760	MBD4	99	69.527	ENSLAFG00000010609	MBD4	99	69.527	Loxodonta_africana
ENSCHIG00000009760	MBD4	99	69.580	ENSMFAG00000002266	MBD4	99	69.580	Macaca_fascicularis
ENSCHIG00000009760	MBD4	99	68.990	ENSMMUG00000012723	MBD4	99	68.990	Macaca_mulatta
ENSCHIG00000009760	MBD4	95	68.066	ENSMNEG00000029752	MBD4	99	68.066	Macaca_nemestrina
ENSCHIG00000009760	MBD4	100	69.634	ENSMLEG00000024859	MBD4	99	69.634	Mandrillus_leucophaeus
ENSCHIG00000009760	MBD4	100	70.629	ENSMICG00000008022	MBD4	99	70.629	Microcebus_murinus
ENSCHIG00000009760	MBD4	67	45.213	ENSMOCG00000002466	-	96	45.213	Microtus_ochrogaster
ENSCHIG00000009760	MBD4	86	58.130	ENSMODG00000006399	-	99	58.130	Monodelphis_domestica
ENSCHIG00000009760	MBD4	86	44.531	ENSMALG00000021517	mbd4	87	44.531	Monopterus_albus
ENSCHIG00000009760	MBD4	100	62.587	MGP_CAROLIEiJ_G0028760	Mbd4	100	62.587	Mus_caroli
ENSCHIG00000009760	MBD4	100	62.587	ENSMUSG00000030322	Mbd4	100	62.587	Mus_musculus
ENSCHIG00000009760	MBD4	100	62.653	MGP_PahariEiJ_G0022511	-	100	62.653	Mus_pahari
ENSCHIG00000009760	MBD4	100	62.021	MGP_SPRETEiJ_G0029788	Mbd4	100	62.021	Mus_spretus
ENSCHIG00000009760	MBD4	100	72.261	ENSMPUG00000017195	MBD4	99	72.261	Mustela_putorius_furo
ENSCHIG00000009760	MBD4	95	73.723	ENSMLUG00000014766	MBD4	100	73.723	Myotis_lucifugus
ENSCHIG00000009760	MBD4	100	69.983	ENSNLEG00000005337	MBD4	99	69.983	Nomascus_leucogenys
ENSCHIG00000009760	MBD4	51	100.000	ENSMEUG00000015599	-	74	100.000	Notamacropus_eugenii
ENSCHIG00000009760	MBD4	100	63.986	ENSOPRG00000000473	MBD4	99	63.986	Ochotona_princeps
ENSCHIG00000009760	MBD4	73	44.262	ENSOANG00000004589	-	97	43.736	Ornithorhynchus_anatinus
ENSCHIG00000009760	MBD4	100	62.847	ENSOCUG00000013006	MBD4	99	62.847	Oryctolagus_cuniculus
ENSCHIG00000009760	MBD4	86	43.659	ENSORLG00015015342	mbd4	98	43.659	Oryzias_latipes_hsok
ENSCHIG00000009760	MBD4	100	66.549	ENSOGAG00000010236	MBD4	100	66.549	Otolemur_garnettii
ENSCHIG00000009760	MBD4	100	98.375	ENSOARG00000014699	MBD4	100	98.375	Ovis_aries
ENSCHIG00000009760	MBD4	100	70.435	ENSPPAG00000036528	MBD4	99	70.435	Pan_paniscus
ENSCHIG00000009760	MBD4	100	72.085	ENSPPRG00000016480	MBD4	99	72.085	Panthera_pardus
ENSCHIG00000009760	MBD4	100	70.609	ENSPTRG00000015377	MBD4	99	70.609	Pan_troglodytes
ENSCHIG00000009760	MBD4	100	69.808	ENSPANG00000015047	MBD4	99	69.808	Papio_anubis
ENSCHIG00000009760	MBD4	94	48.527	ENSPSIG00000007892	MBD4	96	48.527	Pelodiscus_sinensis
ENSCHIG00000009760	MBD4	91	56.238	ENSPEMG00000006226	Mbd4	97	56.238	Peromyscus_maniculatus_bairdii
ENSCHIG00000009760	MBD4	90	56.840	ENSPCIG00000002276	-	98	56.840	Phascolarctos_cinereus
ENSCHIG00000009760	MBD4	100	69.861	ENSPPYG00000013417	MBD4	99	69.861	Pongo_abelii
ENSCHIG00000009760	MBD4	95	65.574	ENSPCAG00000012915	MBD4	99	65.574	Procavia_capensis
ENSCHIG00000009760	MBD4	100	72.949	ENSPVAG00000005238	MBD4	99	72.949	Pteropus_vampyrus
ENSCHIG00000009760	MBD4	100	61.313	ENSRNOG00000010919	Mbd4	100	62.304	Rattus_norvegicus
ENSCHIG00000009760	MBD4	100	69.808	ENSRBIG00000027722	MBD4	99	69.808	Rhinopithecus_bieti
ENSCHIG00000009760	MBD4	100	69.634	ENSRROG00000029136	MBD4	99	69.634	Rhinopithecus_roxellana
ENSCHIG00000009760	MBD4	100	67.832	ENSSBOG00000016810	MBD4	99	67.832	Saimiri_boliviensis_boliviensis
ENSCHIG00000009760	MBD4	99	53.996	ENSSHAG00000012953	MBD4	99	53.996	Sarcophilus_harrisii
ENSCHIG00000009760	MBD4	86	44.628	ENSSDUG00000001365	mbd4	94	44.628	Seriola_dumerili
ENSCHIG00000009760	MBD4	77	36.323	ENSSLDG00000010295	MBD4	83	36.323	Seriola_lalandi_dorsalis
ENSCHIG00000009760	MBD4	81	59.442	ENSSARG00000004496	-	80	59.442	Sorex_araneus
ENSCHIG00000009760	MBD4	86	51.677	ENSSPUG00000017344	MBD4	91	51.677	Sphenodon_punctatus
ENSCHIG00000009760	MBD4	100	74.081	ENSSSCG00000033303	MBD4	100	74.081	Sus_scrofa
ENSCHIG00000009760	MBD4	51	63.084	ENSTNIG00000017927	mbd4	65	63.084	Tetraodon_nigroviridis
ENSCHIG00000009760	MBD4	87	61.468	ENSTBEG00000003041	-	87	61.468	Tupaia_belangeri
ENSCHIG00000009760	MBD4	98	76.114	ENSTTRG00000011265	MBD4	100	76.114	Tursiops_truncatus
ENSCHIG00000009760	MBD4	87	73.374	ENSUAMG00000000814	MBD4	100	73.374	Ursus_americanus
ENSCHIG00000009760	MBD4	100	72.920	ENSUMAG00000017542	MBD4	100	72.920	Ursus_maritimus
ENSCHIG00000009760	MBD4	66	69.626	ENSVPAG00000004040	-	67	69.626	Vicugna_pacos
ENSCHIG00000009760	MBD4	100	73.369	ENSVVUG00000014222	MBD4	99	73.369	Vulpes_vulpes
ENSCHIG00000009760	MBD4	87	41.400	ENSXETG00000026622	mbd4	91	41.400	Xenopus_tropicalis