EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000009867 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ribosomal L1 domain-containing protein 1-like
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 1444 bases
Position: chr5:45408726-45410169
Accession: 102176764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000005892	Ribosomal_L1	PF00687.21	5.3e-49	1	1
ENSCHIP00000005904	Ribosomal_L1	PF00687.21	6.2e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000013605	-	1299	XM_013963891	ENSCHIP00000005904	432 (aa)	XP_013819345	UPI000D18F370
ENSCHIT00000013593	-	1329	-	ENSCHIP00000005892	442 (aa)	-	UPI000D193D62

Gene Model

Click here to download ENSCHIG00000009867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000009867's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000009867	-	99	86.542	ENSCHIG00000018658	-	99	86.542

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000009867	-	97	60.714	ENSG00000171490	RSL1D1	100	80.612	Homo_sapiens
ENSCHIG00000009867	-	56	48.148	ENSAPOG00000004544	rsl1d1	91	42.982	Acanthochromis_polyacanthus
ENSCHIG00000009867	-	94	65.376	ENSAMEG00000009570	RSL1D1	99	65.173	Ailuropoda_melanoleuca
ENSCHIG00000009867	-	72	40.968	ENSACIG00000006608	rsl1d1	89	41.935	Amphilophus_citrinellus
ENSCHIG00000009867	-	56	48.971	ENSAOCG00000001548	rsl1d1	90	43.567	Amphiprion_ocellaris
ENSCHIG00000009867	-	56	48.971	ENSAPEG00000003334	rsl1d1	90	43.567	Amphiprion_percula
ENSCHIG00000009867	-	55	49.791	ENSATEG00000009247	rsl1d1	91	42.363	Anabas_testudineus
ENSCHIG00000009867	-	79	43.089	ENSAPLG00000004451	RSL1D1	82	43.089	Anas_platyrhynchos
ENSCHIG00000009867	-	99	56.329	ENSANAG00000026520	-	96	56.608	Aotus_nancymaae
ENSCHIG00000009867	-	94	60.907	ENSANAG00000034590	-	100	60.000	Aotus_nancymaae
ENSCHIG00000009867	-	94	60.135	ENSANAG00000028185	-	100	59.831	Aotus_nancymaae
ENSCHIG00000009867	-	72	45.513	ENSACLG00000017535	rsl1d1	91	44.478	Astatotilapia_calliptera
ENSCHIG00000009867	-	80	41.761	ENSAMXG00000008624	rsl1d1	99	40.314	Astyanax_mexicanus
ENSCHIG00000009867	-	100	85.477	ENSBTAG00000014588	RSL1D1	100	85.477	Bos_taurus
ENSCHIG00000009867	-	94	61.039	ENSCJAG00000008375	-	98	60.042	Callithrix_jacchus
ENSCHIG00000009867	-	94	60.390	ENSCJAG00000042606	-	98	60.042	Callithrix_jacchus
ENSCHIG00000009867	-	95	65.745	ENSCAFG00000018865	RSL1D1	100	65.510	Canis_familiaris
ENSCHIG00000009867	-	91	53.318	ENSCAFG00020002457	-	94	53.571	Canis_lupus_dingo
ENSCHIG00000009867	-	100	68.615	ENSCAFG00020024488	-	100	65.768	Canis_lupus_dingo
ENSCHIG00000009867	-	100	56.967	ENSTSYG00000009276	RSL1D1	100	55.943	Carlito_syrichta
ENSCHIG00000009867	-	99	57.595	ENSCPOG00000010630	RSL1D1	95	59.193	Cavia_porcellus
ENSCHIG00000009867	-	100	58.571	ENSCCAG00000017391	-	100	58.740	Cebus_capucinus
ENSCHIG00000009867	-	99	59.653	ENSCCAG00000031641	-	97	59.219	Cebus_capucinus
ENSCHIG00000009867	-	100	55.172	ENSCCAG00000025197	-	100	57.363	Cebus_capucinus
ENSCHIG00000009867	-	93	56.979	ENSCATG00000031153	RSL1D1	90	62.211	Cercocebus_atys
ENSCHIG00000009867	-	100	59.664	ENSCLAG00000010975	RSL1D1	95	61.384	Chinchilla_lanigera
ENSCHIG00000009867	-	95	60.000	ENSCSAG00000008255	RSL1D1	100	60.123	Chlorocebus_sabaeus
ENSCHIG00000009867	-	84	70.397	ENSCHOG00000010827	RSL1D1	76	72.797	Choloepus_hoffmanni
ENSCHIG00000009867	-	55	54.812	ENSCPBG00000004564	RSL1D1	94	53.302	Chrysemys_picta_bellii
ENSCHIG00000009867	-	53	31.878	ENSCING00000011810	-	100	31.878	Ciona_intestinalis
ENSCHIG00000009867	-	62	30.545	ENSCSAVG00000011797	-	68	30.472	Ciona_savignyi
ENSCHIG00000009867	-	95	60.814	ENSCANG00000029202	RSL1D1	100	60.736	Colobus_angolensis_palliatus
ENSCHIG00000009867	-	99	54.967	ENSCGRG00001014989	Rsl1d1	99	55.310	Cricetulus_griseus_chok1gshd
ENSCHIG00000009867	-	99	54.967	ENSCGRG00000001905	Rsl1d1	99	55.310	Cricetulus_griseus_crigri
ENSCHIG00000009867	-	56	48.548	ENSCSEG00000019693	rsl1d1	92	40.286	Cynoglossus_semilaevis
ENSCHIG00000009867	-	62	47.794	ENSCVAG00000000672	rsl1d1	95	41.341	Cyprinodon_variegatus
ENSCHIG00000009867	-	80	40.698	ENSDARG00000055868	rsl1d1	87	40.469	Danio_rerio
ENSCHIG00000009867	-	95	56.632	ENSDNOG00000004601	-	94	56.559	Dasypus_novemcinctus
ENSCHIG00000009867	-	95	56.632	ENSDNOG00000040779	-	94	56.559	Dasypus_novemcinctus
ENSCHIG00000009867	-	66	44.745	ENSDNOG00000047567	-	99	45.345	Dasypus_novemcinctus
ENSCHIG00000009867	-	97	51.724	ENSDORG00000013432	-	98	51.724	Dipodomys_ordii
ENSCHIG00000009867	-	55	43.933	ENSEBUG00000005400	-	57	43.933	Eptatretus_burgeri
ENSCHIG00000009867	-	97	65.199	ENSEASG00005011499	RSL1D1	98	65.773	Equus_asinus_asinus
ENSCHIG00000009867	-	93	66.013	ENSECAG00000025036	RSL1D1	98	65.155	Equus_caballus
ENSCHIG00000009867	-	73	83.871	ENSEEUG00000015569	-	79	83.871	Erinaceus_europaeus
ENSCHIG00000009867	-	79	42.407	ENSELUG00000019243	rsl1d1	95	41.261	Esox_lucius
ENSCHIG00000009867	-	100	64.490	ENSFCAG00000010114	RSL1D1	100	64.490	Felis_catus
ENSCHIG00000009867	-	92	40.133	ENSFALG00000003869	RSL1D1	96	39.957	Ficedula_albicollis
ENSCHIG00000009867	-	100	57.768	ENSFDAG00000011414	RSL1D1	100	57.860	Fukomys_damarensis
ENSCHIG00000009867	-	72	42.994	ENSFHEG00000017235	rsl1d1	88	42.229	Fundulus_heteroclitus
ENSCHIG00000009867	-	55	48.117	ENSGMOG00000013048	rsl1d1	84	48.117	Gadus_morhua
ENSCHIG00000009867	-	57	52.632	ENSGALG00000033690	RSL1D1	56	52.632	Gallus_gallus
ENSCHIG00000009867	-	55	49.372	ENSGAFG00000020794	rsl1d1	90	41.926	Gambusia_affinis
ENSCHIG00000009867	-	80	40.580	ENSGACG00000004483	rsl1d1	91	40.580	Gasterosteus_aculeatus
ENSCHIG00000009867	-	94	60.173	ENSGGOG00000013463	RSL1D1	99	60.082	Gorilla_gorilla
ENSCHIG00000009867	-	72	45.833	ENSHBUG00000001551	rsl1d1	90	43.844	Haplochromis_burtoni
ENSCHIG00000009867	-	100	57.802	ENSHGLG00000006774	RSL1D1	95	60.422	Heterocephalus_glaber_female
ENSCHIG00000009867	-	100	57.802	ENSHGLG00100017781	RSL1D1	95	60.422	Heterocephalus_glaber_male
ENSCHIG00000009867	-	55	43.460	ENSHCOG00000015208	rsl1d1	85	39.159	Hippocampus_comes
ENSCHIG00000009867	-	80	42.090	ENSIPUG00000001677	rsl1d1	90	41.834	Ictalurus_punctatus
ENSCHIG00000009867	-	86	58.413	ENSSTOG00000015400	RSL1D1	99	58.513	Ictidomys_tridecemlineatus
ENSCHIG00000009867	-	91	52.681	ENSJJAG00000012115	Rsl1d1	99	52.915	Jaculus_jaculus
ENSCHIG00000009867	-	56	47.500	ENSKMAG00000021908	rsl1d1	93	42.571	Kryptolebias_marmoratus
ENSCHIG00000009867	-	54	46.250	ENSLBEG00000001076	rsl1d1	96	39.665	Labrus_bergylta
ENSCHIG00000009867	-	88	40.633	ENSLOCG00000007416	rsl1d1	97	38.940	Lepisosteus_oculatus
ENSCHIG00000009867	-	94	62.356	ENSLAFG00000013664	RSL1D1	96	61.339	Loxodonta_africana
ENSCHIG00000009867	-	92	60.352	ENSMFAG00000037288	RSL1D1	99	60.861	Macaca_fascicularis
ENSCHIG00000009867	-	96	60.297	ENSMMUG00000019632	RSL1D1	99	79.618	Macaca_mulatta
ENSCHIG00000009867	-	92	60.132	ENSMNEG00000044196	RSL1D1	99	60.656	Macaca_nemestrina
ENSCHIG00000009867	-	92	60.889	ENSMLEG00000042058	RSL1D1	99	60.986	Mandrillus_leucophaeus
ENSCHIG00000009867	-	72	44.904	ENSMAMG00000004385	rsl1d1	91	43.235	Mastacembelus_armatus
ENSCHIG00000009867	-	55	50.424	ENSMZEG00005007150	rsl1d1	91	44.478	Maylandia_zebra
ENSCHIG00000009867	-	58	52.988	ENSMGAG00000000863	RSL1D1	98	40.690	Meleagris_gallopavo
ENSCHIG00000009867	-	100	54.767	ENSMICG00000008229	RSL1D1	100	54.713	Microcebus_murinus
ENSCHIG00000009867	-	89	56.235	ENSMOCG00000017724	Rsl1d1	92	56.127	Microtus_ochrogaster
ENSCHIG00000009867	-	63	39.785	ENSMMOG00000003730	rsl1d1	78	45.957	Mola_mola
ENSCHIG00000009867	-	93	43.966	ENSMODG00000004625	-	100	45.652	Monodelphis_domestica
ENSCHIG00000009867	-	88	42.532	ENSMODG00000029494	-	88	41.266	Monodelphis_domestica
ENSCHIG00000009867	-	55	51.046	ENSMALG00000009531	rsl1d1	90	44.807	Monopterus_albus
ENSCHIG00000009867	-	99	54.605	ENSMUSG00000005846	Rsl1d1	95	55.505	Mus_musculus
ENSCHIG00000009867	-	99	54.505	MGP_PahariEiJ_G0016164	Rsl1d1	99	54.626	Mus_pahari
ENSCHIG00000009867	-	99	54.825	MGP_SPRETEiJ_G0021352	Rsl1d1	95	55.196	Mus_spretus
ENSCHIG00000009867	-	95	64.706	ENSMPUG00000014548	RSL1D1	100	64.588	Mustela_putorius_furo
ENSCHIG00000009867	-	100	62.851	ENSMLUG00000000784	RSL1D1	100	62.048	Myotis_lucifugus
ENSCHIG00000009867	-	92	57.639	ENSNGAG00000009086	-	94	57.639	Nannospalax_galili
ENSCHIG00000009867	-	92	54.382	ENSNGAG00000013578	-	98	53.933	Nannospalax_galili
ENSCHIG00000009867	-	55	50.424	ENSNBRG00000002777	rsl1d1	85	44.231	Neolamprologus_brichardi
ENSCHIG00000009867	-	96	61.407	ENSNLEG00000010196	-	100	61.020	Nomascus_leucogenys
ENSCHIG00000009867	-	73	65.944	ENSNLEG00000012149	-	93	62.360	Nomascus_leucogenys
ENSCHIG00000009867	-	100	59.275	ENSOPRG00000004442	-	100	59.267	Ochotona_princeps
ENSCHIG00000009867	-	55	49.576	ENSONIG00000019757	rsl1d1	88	42.994	Oreochromis_niloticus
ENSCHIG00000009867	-	91	40.319	ENSOANG00000009408	-	99	40.547	Ornithorhynchus_anatinus
ENSCHIG00000009867	-	96	59.519	ENSOCUG00000004751	RSL1D1	100	59.414	Oryctolagus_cuniculus
ENSCHIG00000009867	-	55	49.153	ENSORLG00000002877	rsl1d1	84	42.765	Oryzias_latipes
ENSCHIG00000009867	-	72	43.087	ENSORLG00020006636	rsl1d1	68	49.153	Oryzias_latipes_hni
ENSCHIG00000009867	-	83	41.667	ENSORLG00015005427	rsl1d1	76	45.489	Oryzias_latipes_hsok
ENSCHIG00000009867	-	55	48.305	ENSOMEG00000008036	rsl1d1	88	40.588	Oryzias_melastigma
ENSCHIG00000009867	-	100	58.197	ENSOGAG00000015151	RSL1D1	100	57.992	Otolemur_garnettii
ENSCHIG00000009867	-	100	87.759	ENSOARG00000006923	RSL1D1	100	87.759	Ovis_aries
ENSCHIG00000009867	-	97	60.714	ENSPPAG00000039716	RSL1D1	99	60.494	Pan_paniscus
ENSCHIG00000009867	-	95	65.106	ENSPPRG00000005220	RSL1D1	100	65.102	Panthera_pardus
ENSCHIG00000009867	-	93	64.143	ENSPTIG00000005526	RSL1D1	94	64.811	Panthera_tigris_altaica
ENSCHIG00000009867	-	97	60.504	ENSPTRG00000007777	RSL1D1	99	60.288	Pan_troglodytes
ENSCHIG00000009867	-	92	60.310	ENSPANG00000023073	RSL1D1	99	60.246	Papio_anubis
ENSCHIG00000009867	-	94	36.520	ENSPKIG00000022687	rsl1d1	98	36.275	Paramormyrops_kingsleyae
ENSCHIG00000009867	-	82	42.246	ENSPSIG00000011642	RSL1D1	99	42.699	Pelodiscus_sinensis
ENSCHIG00000009867	-	71	42.810	ENSPMGG00000022261	rsl1d1	98	42.810	Periophthalmus_magnuspinnatus
ENSCHIG00000009867	-	99	53.548	ENSPEMG00000009523	Rsl1d1	95	54.110	Peromyscus_maniculatus_bairdii
ENSCHIG00000009867	-	88	49.610	ENSPCIG00000026851	-	93	49.610	Phascolarctos_cinereus
ENSCHIG00000009867	-	59	48.627	ENSPFOG00000005017	rsl1d1	66	50.209	Poecilia_formosa
ENSCHIG00000009867	-	59	48.235	ENSPLAG00000000482	rsl1d1	71	43.910	Poecilia_latipinna
ENSCHIG00000009867	-	59	48.235	ENSPMEG00000007032	rsl1d1	80	44.089	Poecilia_mexicana
ENSCHIG00000009867	-	70	36.728	ENSPREG00000016619	rsl1d1	74	36.728	Poecilia_reticulata
ENSCHIG00000009867	-	94	61.388	ENSPPYG00000007112	RSL1D1	99	60.494	Pongo_abelii
ENSCHIG00000009867	-	94	58.588	ENSPPYG00000019335	-	95	58.491	Pongo_abelii
ENSCHIG00000009867	-	81	69.697	ENSPCAG00000011264	-	83	69.697	Procavia_capensis
ENSCHIG00000009867	-	72	58.675	ENSPCOG00000022456	RSL1D1	99	53.439	Propithecus_coquereli
ENSCHIG00000009867	-	100	64.887	ENSPVAG00000005014	RSL1D1	100	64.887	Pteropus_vampyrus
ENSCHIG00000009867	-	55	50.847	ENSPNYG00000002850	rsl1d1	90	43.844	Pundamilia_nyererei
ENSCHIG00000009867	-	80	41.436	ENSPNAG00000011848	rsl1d1	94	41.457	Pygocentrus_nattereri
ENSCHIG00000009867	-	73	51.420	ENSRNOG00000032439	Rsl1d1	55	50.760	Rattus_norvegicus
ENSCHIG00000009867	-	92	57.583	ENSRNOG00000048608	Rsl1d1l1	91	56.872	Rattus_norvegicus
ENSCHIG00000009867	-	92	57.583	ENSRNOG00000061236	LOC108348298	91	56.872	Rattus_norvegicus
ENSCHIG00000009867	-	97	61.311	ENSRBIG00000030317	RSL1D1	100	61.145	Rhinopithecus_bieti
ENSCHIG00000009867	-	98	60.797	ENSRROG00000033658	RSL1D1	100	60.532	Rhinopithecus_roxellana
ENSCHIG00000009867	-	98	56.846	ENSSBOG00000028384	-	100	56.619	Saimiri_boliviensis_boliviensis
ENSCHIG00000009867	-	94	61.555	ENSSBOG00000035910	-	100	60.569	Saimiri_boliviensis_boliviensis
ENSCHIG00000009867	-	100	44.399	ENSSBOG00000029329	-	100	44.172	Saimiri_boliviensis_boliviensis
ENSCHIG00000009867	-	77	43.695	ENSSFOG00015011354	rsl1d1	95	43.529	Scleropages_formosus
ENSCHIG00000009867	-	70	41.776	ENSSMAG00000007957	rsl1d1	90	41.813	Scophthalmus_maximus
ENSCHIG00000009867	-	55	48.954	ENSSDUG00000008447	rsl1d1	77	43.590	Seriola_dumerili
ENSCHIG00000009867	-	55	48.117	ENSSLDG00000008293	rsl1d1	83	43.312	Seriola_lalandi_dorsalis
ENSCHIG00000009867	-	93	42.411	ENSSPUG00000007525	RSL1D1	98	42.411	Sphenodon_punctatus
ENSCHIG00000009867	-	56	48.971	ENSSPAG00000009755	rsl1d1	92	42.120	Stegastes_partitus
ENSCHIG00000009867	-	94	72.961	ENSSSCG00000023984	RSL1D1	100	70.385	Sus_scrofa
ENSCHIG00000009867	-	57	56.327	ENSTGUG00000005174	RSL1D1	99	56.327	Taeniopygia_guttata
ENSCHIG00000009867	-	56	46.341	ENSTRUG00000016970	rsl1d1	89	40.762	Takifugu_rubripes
ENSCHIG00000009867	-	56	47.521	ENSTNIG00000012925	rsl1d1	83	42.071	Tetraodon_nigroviridis
ENSCHIG00000009867	-	82	50.490	ENSTBEG00000014678	RSL1D1	99	50.490	Tupaia_belangeri
ENSCHIG00000009867	-	94	75.551	ENSTTRG00000011629	RSL1D1	100	74.268	Tursiops_truncatus
ENSCHIG00000009867	-	94	67.593	ENSUAMG00000004470	RSL1D1	100	65.580	Ursus_americanus
ENSCHIG00000009867	-	86	59.825	ENSUMAG00000003994	RSL1D1	100	59.825	Ursus_maritimus
ENSCHIG00000009867	-	94	59.908	ENSVVUG00000024962	-	97	59.565	Vulpes_vulpes
ENSCHIG00000009867	-	95	65.532	ENSVVUG00000018170	-	100	65.306	Vulpes_vulpes
ENSCHIG00000009867	-	71	52.698	ENSXETG00000033365	-	97	47.806	Xenopus_tropicalis
ENSCHIG00000009867	-	59	47.826	ENSXMAG00000025111	rsl1d1	70	48.571	Xiphophorus_maculatus