EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000010284 (Gene tree)
Gene ID: 102172916
Gene Symbol: -
Alias: -
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 8756 bases
Position: chr13:54383318-54392073
Accession: 102172916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000006458	FDF	PF09532.10	8.1e-25	1	1
ENSCHIP00000006454	FDF	PF09532.10	9.7e-25	1	1
ENSCHIP00000006454	SM-ATX	PF14438.6	7e-08	1	1
ENSCHIP00000006458	SM-ATX	PF14438.6	7.2e-08	1	1
ENSCHIP00000006458	LSM14	PF12701.7	8.7e-31	1	1
ENSCHIP00000006454	LSM14	PF12701.7	9.9e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000014181	-	1158	XM_018057597	ENSCHIP00000006458	385 (aa)	XP_017913086	UPI0006B1412E
ENSCHIT00000014176	-	1289	XM_018057596	ENSCHIP00000006454	424 (aa)	XP_017913085	UPI0008478000

Gene Model

Click here to download ENSCHIG00000010284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000010284's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000010284	-	92	50.346	ENSCHIG00000009458	LSM14A	86	51.716
ENSCHIG00000010284	-	99	72.368	ENSCHIG00000022681	-	100	72.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000010284	-	100	93.766	ENSG00000149657	LSM14B	100	93.766	Homo_sapiens
ENSCHIG00000010284	-	90	55.464	ENSAPOG00000001780	lsm14b	92	55.795	Acanthochromis_polyacanthus
ENSCHIG00000010284	-	99	94.799	ENSAMEG00000013430	LSM14B	100	94.799	Ailuropoda_melanoleuca
ENSCHIG00000010284	-	90	52.841	ENSACIG00000012266	lsm14b	91	50.954	Amphilophus_citrinellus
ENSCHIG00000010284	-	62	41.975	ENSACIG00000003147	LSM14B	88	40.833	Amphilophus_citrinellus
ENSCHIG00000010284	-	98	48.974	ENSAOCG00000006667	LSM14B	90	49.441	Amphiprion_ocellaris
ENSCHIG00000010284	-	90	56.164	ENSAOCG00000012380	lsm14b	92	56.486	Amphiprion_ocellaris
ENSCHIG00000010284	-	90	49.198	ENSAPEG00000023633	lsm14b	92	50.407	Amphiprion_percula
ENSCHIG00000010284	-	90	53.911	ENSATEG00000016603	lsm14b	92	54.270	Anabas_testudineus
ENSCHIG00000010284	-	68	42.905	ENSATEG00000015895	LSM14B	83	43.431	Anabas_testudineus
ENSCHIG00000010284	-	92	85.459	ENSAPLG00000013203	LSM14B	100	85.459	Anas_platyrhynchos
ENSCHIG00000010284	-	99	82.078	ENSACAG00000016195	LSM14B	99	82.078	Anolis_carolinensis
ENSCHIG00000010284	-	100	92.987	ENSANAG00000037915	LSM14B	100	92.987	Aotus_nancymaae
ENSCHIG00000010284	-	89	50.820	ENSACLG00000019663	lsm14b	92	54.121	Astatotilapia_calliptera
ENSCHIG00000010284	-	99	60.902	ENSAMXG00000002865	lsm14b	99	60.902	Astyanax_mexicanus
ENSCHIG00000010284	-	100	98.585	ENSBTAG00000021558	LSM14B	100	98.585	Bos_taurus
ENSCHIG00000010284	-	100	93.247	ENSCJAG00000014434	LSM14B	100	93.247	Callithrix_jacchus
ENSCHIG00000010284	-	91	95.052	ENSCAFG00000012518	LSM14B	98	95.052	Canis_familiaris
ENSCHIG00000010284	-	100	95.755	ENSCAFG00020022150	LSM14B	100	95.755	Canis_lupus_dingo
ENSCHIG00000010284	-	89	90.936	ENSTSYG00000031914	LSM14B	89	90.936	Carlito_syrichta
ENSCHIG00000010284	-	89	92.128	ENSCAPG00000013059	LSM14B	100	92.128	Cavia_aperea
ENSCHIG00000010284	-	89	92.398	ENSCPOG00000038080	LSM14B	100	92.398	Cavia_porcellus
ENSCHIG00000010284	-	100	93.247	ENSCCAG00000021267	LSM14B	100	93.247	Cebus_capucinus
ENSCHIG00000010284	-	100	69.575	ENSCCAG00000024900	-	99	76.299	Cebus_capucinus
ENSCHIG00000010284	-	100	93.506	ENSCATG00000036006	LSM14B	100	93.506	Cercocebus_atys
ENSCHIG00000010284	-	89	92.105	ENSCLAG00000003186	LSM14B	100	92.105	Chinchilla_lanigera
ENSCHIG00000010284	-	100	93.632	ENSCSAG00000015729	LSM14B	100	93.632	Chlorocebus_sabaeus
ENSCHIG00000010284	-	71	65.902	ENSCHOG00000006997	-	100	65.902	Choloepus_hoffmanni
ENSCHIG00000010284	-	99	86.019	ENSCPBG00000027065	LSM14B	99	86.019	Chrysemys_picta_bellii
ENSCHIG00000010284	-	89	92.982	ENSCANG00000036986	LSM14B	100	92.982	Colobus_angolensis_palliatus
ENSCHIG00000010284	-	100	91.688	ENSCGRG00001018399	Lsm14b	100	91.688	Cricetulus_griseus_chok1gshd
ENSCHIG00000010284	-	70	89.597	ENSCGRG00000006111	-	100	89.597	Cricetulus_griseus_crigri
ENSCHIG00000010284	-	63	79.424	ENSCGRG00000002484	-	100	77.366	Cricetulus_griseus_crigri
ENSCHIG00000010284	-	95	49.351	ENSCSEG00000020669	LSM14B	92	48.509	Cynoglossus_semilaevis
ENSCHIG00000010284	-	91	50.949	ENSCSEG00000004722	lsm14b	93	51.467	Cynoglossus_semilaevis
ENSCHIG00000010284	-	65	37.891	ENSCVAG00000012433	-	88	36.402	Cyprinodon_variegatus
ENSCHIG00000010284	-	99	55.897	ENSDARG00000025386	lsm14b	99	56.599	Danio_rerio
ENSCHIG00000010284	-	72	87.869	ENSDNOG00000025246	LSM14B	100	87.869	Dasypus_novemcinctus
ENSCHIG00000010284	-	90	88.406	ENSDORG00000016683	Lsm14b	100	87.541	Dipodomys_ordii
ENSCHIG00000010284	-	57	85.520	ENSETEG00000011188	-	96	85.520	Echinops_telfairi
ENSCHIG00000010284	-	99	75.325	ENSETEG00000001869	-	100	74.026	Echinops_telfairi
ENSCHIG00000010284	-	72	94.426	ENSEASG00005023218	LSM14B	100	94.426	Equus_asinus_asinus
ENSCHIG00000010284	-	100	95.991	ENSECAG00000010659	LSM14B	100	95.991	Equus_caballus
ENSCHIG00000010284	-	54	97.980	ENSEEUG00000007331	LSM14B	80	97.980	Erinaceus_europaeus
ENSCHIG00000010284	-	90	53.221	ENSELUG00000016299	LSM14B	99	53.708	Esox_lucius
ENSCHIG00000010284	-	96	58.311	ENSELUG00000005780	lsm14b	92	60.331	Esox_lucius
ENSCHIG00000010284	-	100	95.584	ENSFCAG00000003248	LSM14B	100	95.584	Felis_catus
ENSCHIG00000010284	-	91	86.822	ENSFALG00000010618	LSM14B	100	86.822	Ficedula_albicollis
ENSCHIG00000010284	-	89	91.520	ENSFDAG00000002214	LSM14B	100	91.520	Fukomys_damarensis
ENSCHIG00000010284	-	79	44.582	ENSFHEG00000003362	LSM14B	80	43.963	Fundulus_heteroclitus
ENSCHIG00000010284	-	100	49.624	ENSFHEG00000006237	lsm14b	100	49.383	Fundulus_heteroclitus
ENSCHIG00000010284	-	100	51.026	ENSGMOG00000017115	lsm14b	91	50.986	Gadus_morhua
ENSCHIG00000010284	-	99	86.417	ENSGALG00000005125	LSM14B	99	87.354	Gallus_gallus
ENSCHIG00000010284	-	100	47.236	ENSGAFG00000020318	lsm14b	75	69.930	Gambusia_affinis
ENSCHIG00000010284	-	66	42.023	ENSGAFG00000013723	LSM14B	87	39.744	Gambusia_affinis
ENSCHIG00000010284	-	91	54.945	ENSGACG00000009973	lsm14b	92	54.945	Gasterosteus_aculeatus
ENSCHIG00000010284	-	63	80.816	ENSGAGG00000004106	LSM14B	99	77.606	Gopherus_agassizii
ENSCHIG00000010284	-	90	91.667	ENSGGOG00000005630	LSM14B	100	91.803	Gorilla_gorilla
ENSCHIG00000010284	-	100	92.987	ENSHGLG00000015055	LSM14B	100	92.987	Heterocephalus_glaber_female
ENSCHIG00000010284	-	89	90.058	ENSHGLG00100015273	LSM14B	100	91.391	Heterocephalus_glaber_male
ENSCHIG00000010284	-	95	52.520	ENSHCOG00000018747	LSM14B	92	52.222	Hippocampus_comes
ENSCHIG00000010284	-	59	43.913	ENSHCOG00000004867	lsm14b	86	44.255	Hippocampus_comes
ENSCHIG00000010284	-	90	61.864	ENSIPUG00000014946	lsm14b	87	61.281	Ictalurus_punctatus
ENSCHIG00000010284	-	89	92.982	ENSSTOG00000020482	LSM14B	100	92.982	Ictidomys_tridecemlineatus
ENSCHIG00000010284	-	99	91.579	ENSJJAG00000012728	Lsm14b	99	91.579	Jaculus_jaculus
ENSCHIG00000010284	-	90	52.747	ENSKMAG00000017524	lsm14b	93	52.973	Kryptolebias_marmoratus
ENSCHIG00000010284	-	52	42.857	ENSKMAG00000012834	-	88	43.062	Kryptolebias_marmoratus
ENSCHIG00000010284	-	69	41.353	ENSLBEG00000007951	LSM14B	86	41.453	Labrus_bergylta
ENSCHIG00000010284	-	99	70.824	ENSLACG00000003849	LSM14B	99	70.588	Latimeria_chalumnae
ENSCHIG00000010284	-	99	63.613	ENSLOCG00000003746	lsm14b	99	63.613	Lepisosteus_oculatus
ENSCHIG00000010284	-	90	88.439	ENSLAFG00000007492	LSM14B	100	88.439	Loxodonta_africana
ENSCHIG00000010284	-	100	94.026	ENSMFAG00000041479	LSM14B	100	94.026	Macaca_fascicularis
ENSCHIG00000010284	-	100	94.026	ENSMMUG00000014084	LSM14B	100	94.026	Macaca_mulatta
ENSCHIG00000010284	-	100	94.026	ENSMNEG00000045573	LSM14B	100	94.026	Macaca_nemestrina
ENSCHIG00000010284	-	89	92.690	ENSMLEG00000040895	LSM14B	100	92.690	Mandrillus_leucophaeus
ENSCHIG00000010284	-	99	50.129	ENSMAMG00000024124	LSM14B	91	50.279	Mastacembelus_armatus
ENSCHIG00000010284	-	90	51.657	ENSMAMG00000020539	lsm14b	92	53.134	Mastacembelus_armatus
ENSCHIG00000010284	-	91	47.989	ENSMZEG00005026001	LSM14B	94	49.863	Maylandia_zebra
ENSCHIG00000010284	-	89	50.546	ENSMZEG00005000987	lsm14b	92	54.121	Maylandia_zebra
ENSCHIG00000010284	-	91	80.278	ENSMGAG00000005300	LSM14B	100	81.389	Meleagris_gallopavo
ENSCHIG00000010284	-	100	90.909	ENSMAUG00000020700	Lsm14b	100	90.909	Mesocricetus_auratus
ENSCHIG00000010284	-	100	93.766	ENSMICG00000014675	LSM14B	100	93.766	Microcebus_murinus
ENSCHIG00000010284	-	100	90.909	ENSMOCG00000020600	Lsm14b	100	90.909	Microtus_ochrogaster
ENSCHIG00000010284	-	65	74.909	ENSMOCG00000005119	-	93	74.725	Microtus_ochrogaster
ENSCHIG00000010284	-	91	51.282	ENSMMOG00000017321	LSM14B	91	51.282	Mola_mola
ENSCHIG00000010284	-	90	53.107	ENSMMOG00000020042	lsm14b	95	53.333	Mola_mola
ENSCHIG00000010284	-	72	86.230	ENSMODG00000016690	LSM14B	100	86.230	Monodelphis_domestica
ENSCHIG00000010284	-	95	53.533	ENSMALG00000004783	lsm14b	92	52.422	Monopterus_albus
ENSCHIG00000010284	-	92	49.727	ENSMALG00000022251	LSM14B	92	49.311	Monopterus_albus
ENSCHIG00000010284	-	100	91.274	MGP_CAROLIEiJ_G0024770	Lsm14b	100	91.274	Mus_caroli
ENSCHIG00000010284	-	100	91.169	ENSMUSG00000039108	Lsm14b	100	91.169	Mus_musculus
ENSCHIG00000010284	-	100	91.745	MGP_PahariEiJ_G0026214	Lsm14b	100	91.745	Mus_pahari
ENSCHIG00000010284	-	100	91.509	MGP_SPRETEiJ_G0025693	Lsm14b	100	91.509	Mus_spretus
ENSCHIG00000010284	-	95	89.826	ENSMPUG00000007584	LSM14B	100	89.578	Mustela_putorius_furo
ENSCHIG00000010284	-	100	95.078	ENSMLUG00000000304	LSM14B	100	94.819	Myotis_lucifugus
ENSCHIG00000010284	-	60	87.446	ENSNGAG00000016550	Lsm14b	100	87.446	Nannospalax_galili
ENSCHIG00000010284	-	89	92.690	ENSNLEG00000015757	LSM14B	100	92.690	Nomascus_leucogenys
ENSCHIG00000010284	-	77	97.887	ENSMEUG00000008267	-	77	97.945	Notamacropus_eugenii
ENSCHIG00000010284	-	63	55.785	ENSMEUG00000006305	-	85	85.549	Notamacropus_eugenii
ENSCHIG00000010284	-	50	95.000	ENSOPRG00000000447	-	59	95.000	Ochotona_princeps
ENSCHIG00000010284	-	100	93.506	ENSODEG00000004099	LSM14B	100	93.506	Octodon_degus
ENSCHIG00000010284	-	89	55.742	ENSONIG00000020318	lsm14b	92	56.319	Oreochromis_niloticus
ENSCHIG00000010284	-	72	81.311	ENSOANG00000003370	LSM14B	99	81.311	Ornithorhynchus_anatinus
ENSCHIG00000010284	-	89	88.081	ENSOCUG00000006279	LSM14B	100	88.081	Oryctolagus_cuniculus
ENSCHIG00000010284	-	92	46.361	ENSORLG00000028353	LSM14B	91	45.983	Oryzias_latipes
ENSCHIG00000010284	-	90	49.322	ENSORLG00000013525	lsm14b	92	51.872	Oryzias_latipes
ENSCHIG00000010284	-	90	48.787	ENSORLG00020020553	lsm14b	92	51.872	Oryzias_latipes_hni
ENSCHIG00000010284	-	66	34.859	ENSORLG00020018191	-	85	35.547	Oryzias_latipes_hni
ENSCHIG00000010284	-	92	45.845	ENSORLG00015013157	LSM14B	91	45.455	Oryzias_latipes_hsok
ENSCHIG00000010284	-	90	48.787	ENSORLG00015016862	lsm14b	92	51.872	Oryzias_latipes_hsok
ENSCHIG00000010284	-	90	48.518	ENSOMEG00000023917	lsm14b	92	51.892	Oryzias_melastigma
ENSCHIG00000010284	-	64	40.486	ENSOMEG00000000171	-	97	39.922	Oryzias_melastigma
ENSCHIG00000010284	-	100	93.160	ENSOGAG00000003915	LSM14B	100	93.160	Otolemur_garnettii
ENSCHIG00000010284	-	92	98.201	ENSOARG00000014706	LSM14B	99	98.201	Ovis_aries
ENSCHIG00000010284	-	90	91.667	ENSPPAG00000035799	LSM14B	95	91.667	Pan_paniscus
ENSCHIG00000010284	-	100	95.844	ENSPPRG00000009197	LSM14B	100	95.844	Panthera_pardus
ENSCHIG00000010284	-	70	93.919	ENSPTIG00000021518	LSM14B	100	93.919	Panthera_tigris_altaica
ENSCHIG00000010284	-	100	93.766	ENSPTRG00000013696	LSM14B	100	93.766	Pan_troglodytes
ENSCHIG00000010284	-	100	93.766	ENSPANG00000011747	LSM14B	100	93.766	Papio_anubis
ENSCHIG00000010284	-	99	62.141	ENSPKIG00000003275	lsm14b	87	87.234	Paramormyrops_kingsleyae
ENSCHIG00000010284	-	90	83.815	ENSPSIG00000014762	LSM14B	100	83.815	Pelodiscus_sinensis
ENSCHIG00000010284	-	99	91.864	ENSPEMG00000017688	Lsm14b	100	91.864	Peromyscus_maniculatus_bairdii
ENSCHIG00000010284	-	100	88.312	ENSPCIG00000013405	LSM14B	100	88.312	Phascolarctos_cinereus
ENSCHIG00000010284	-	100	52.500	ENSPFOG00000005631	lsm14b	92	52.717	Poecilia_formosa
ENSCHIG00000010284	-	90	47.458	ENSPLAG00000005793	LSM14B	91	47.486	Poecilia_latipinna
ENSCHIG00000010284	-	100	52.261	ENSPLAG00000002449	lsm14b	92	52.459	Poecilia_latipinna
ENSCHIG00000010284	-	100	51.750	ENSPMEG00000000745	lsm14b	92	51.902	Poecilia_mexicana
ENSCHIG00000010284	-	89	47.143	ENSPMEG00000022953	LSM14B	91	47.500	Poecilia_mexicana
ENSCHIG00000010284	-	65	37.319	ENSPREG00000007828	LSM14B	87	39.841	Poecilia_reticulata
ENSCHIG00000010284	-	100	79.717	ENSPPYG00000011194	LSM14B	100	77.882	Pongo_abelii
ENSCHIG00000010284	-	100	93.506	ENSPCOG00000013625	LSM14B	100	93.506	Propithecus_coquereli
ENSCHIG00000010284	-	82	74.713	ENSPVAG00000017918	LSM14B	100	72.701	Pteropus_vampyrus
ENSCHIG00000010284	-	99	61.637	ENSPNAG00000012777	lsm14b	99	61.381	Pygocentrus_nattereri
ENSCHIG00000010284	-	100	91.038	ENSRNOG00000054557	Lsm14b	100	91.038	Rattus_norvegicus
ENSCHIG00000010284	-	90	92.670	ENSRBIG00000033461	LSM14B	99	92.711	Rhinopithecus_bieti
ENSCHIG00000010284	-	91	93.410	ENSRROG00000042949	LSM14B	100	92.131	Rhinopithecus_roxellana
ENSCHIG00000010284	-	89	92.105	ENSSBOG00000032820	LSM14B	100	92.105	Saimiri_boliviensis_boliviensis
ENSCHIG00000010284	-	90	86.957	ENSSHAG00000015528	LSM14B	100	85.574	Sarcophilus_harrisii
ENSCHIG00000010284	-	90	60.504	ENSSFOG00015004627	lsm14b	92	61.389	Scleropages_formosus
ENSCHIG00000010284	-	90	54.144	ENSSMAG00000012725	lsm14b	92	54.201	Scophthalmus_maximus
ENSCHIG00000010284	-	97	52.604	ENSSMAG00000000135	LSM14B	92	52.329	Scophthalmus_maximus
ENSCHIG00000010284	-	90	54.247	ENSSDUG00000020977	lsm14b	92	54.987	Seriola_dumerili
ENSCHIG00000010284	-	92	53.117	ENSSDUG00000022770	LSM14B	92	53.261	Seriola_dumerili
ENSCHIG00000010284	-	62	41.860	ENSSLDG00000011354	-	89	44.314	Seriola_lalandi_dorsalis
ENSCHIG00000010284	-	53	83.902	ENSSARG00000007749	-	99	83.902	Sorex_araneus
ENSCHIG00000010284	-	99	85.849	ENSSPUG00000014360	LSM14B	99	85.849	Sphenodon_punctatus
ENSCHIG00000010284	-	90	55.874	ENSSPAG00000020915	lsm14b	92	55.056	Stegastes_partitus
ENSCHIG00000010284	-	65	39.773	ENSSPAG00000018854	-	88	38.057	Stegastes_partitus
ENSCHIG00000010284	-	100	93.396	ENSSSCG00000026052	LSM14B	100	91.148	Sus_scrofa
ENSCHIG00000010284	-	90	85.345	ENSTGUG00000007884	LSM14B	100	85.345	Taeniopygia_guttata
ENSCHIG00000010284	-	92	50.000	ENSTRUG00000001529	LSM14B	92	49.319	Takifugu_rubripes
ENSCHIG00000010284	-	100	51.238	ENSTRUG00000011354	lsm14b	100	46.727	Takifugu_rubripes
ENSCHIG00000010284	-	92	54.875	ENSTNIG00000002445	lsm14b	92	54.645	Tetraodon_nigroviridis
ENSCHIG00000010284	-	85	100.000	ENSTTRG00000011043	LSM14B	83	100.000	Tursiops_truncatus
ENSCHIG00000010284	-	98	89.904	ENSUAMG00000025298	LSM14B	99	89.904	Ursus_americanus
ENSCHIG00000010284	-	98	89.904	ENSUMAG00000000480	LSM14B	99	89.904	Ursus_maritimus
ENSCHIG00000010284	-	90	93.913	ENSVVUG00000015920	LSM14B	100	93.443	Vulpes_vulpes
ENSCHIG00000010284	-	86	74.114	ENSXETG00000001997	lsm14b	99	76.453	Xenopus_tropicalis
ENSCHIG00000010284	-	90	50.416	ENSXMAG00000010013	lsm14b	92	49.468	Xiphophorus_maculatus