EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000010329 (Gene tree)
Gene ID: 102171925
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 64329 bases
Position: chr21:21127031-21191359
Accession: 102171925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000006561	HRDC	PF00570.23	8.5e-12	1	1
ENSCHIP00000006595	HRDC	PF00570.23	9.3e-12	1	1
ENSCHIP00000006552	HRDC	PF00570.23	9.6e-12	1	1
ENSCHIP00000006561	BDHCT	PF08072.11	2.4e-20	1	1
ENSCHIP00000006595	BDHCT	PF08072.11	2.6e-20	1	1
ENSCHIP00000006552	BDHCT	PF08072.11	2.6e-20	1	1
ENSCHIP00000006561	DEAD	PF00270.29	7.2e-19	1	1
ENSCHIP00000006595	DEAD	PF00270.29	7.9e-19	1	1
ENSCHIP00000006552	DEAD	PF00270.29	8.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000014288	BLM-202	4962	-	ENSCHIP00000006561	1316 (aa)	-	UPI000D190C37
ENSCHIT00000014323	BLM-203	4245	-	ENSCHIP00000006595	1414 (aa)	-	UPI000D19190C
ENSCHIT00000014279	BLM-201	5301	XM_005694992	ENSCHIP00000006552	1429 (aa)	XP_005695049	UPI00084669DD

Gene Model

Click here to download ENSCHIG00000010329's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03440	Homologous recombination	KEGG
chx03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000010329's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000010329	BLM	100	82.566	ENSG00000197299	BLM	100	81.748	Homo_sapiens
ENSCHIG00000010329	BLM	51	79.404	ENSAPOG00000017966	blm	50	79.404	Acanthochromis_polyacanthus
ENSCHIG00000010329	BLM	100	85.197	ENSAMEG00000013843	BLM	100	82.676	Ailuropoda_melanoleuca
ENSCHIG00000010329	BLM	60	79.133	ENSACIG00000023762	blm	56	79.133	Amphilophus_citrinellus
ENSCHIG00000010329	BLM	55	64.676	ENSAOCG00000003318	blm	57	64.885	Amphiprion_ocellaris
ENSCHIG00000010329	BLM	55	64.549	ENSAPEG00000018105	blm	56	64.758	Amphiprion_percula
ENSCHIG00000010329	BLM	82	80.488	ENSATEG00000006421	blm	77	80.488	Anabas_testudineus
ENSCHIG00000010329	BLM	81	57.452	ENSAPLG00000006878	BLM	98	57.060	Anas_platyrhynchos
ENSCHIG00000010329	BLM	51	81.102	ENSACAG00000014275	BLM	50	80.679	Anolis_carolinensis
ENSCHIG00000010329	BLM	100	80.691	ENSANAG00000038415	BLM	100	80.761	Aotus_nancymaae
ENSCHIG00000010329	BLM	86	72.664	ENSACLG00000020354	blm	88	62.233	Astatotilapia_calliptera
ENSCHIG00000010329	BLM	91	64.286	ENSAMXG00000016970	blm	90	62.269	Astyanax_mexicanus
ENSCHIG00000010329	BLM	100	95.596	ENSBTAG00000020301	BLM	100	95.597	Bos_taurus
ENSCHIG00000010329	BLM	100	80.731	ENSCJAG00000009803	BLM	100	80.423	Callithrix_jacchus
ENSCHIG00000010329	BLM	100	84.590	ENSCAFG00000012385	BLM	100	83.004	Canis_familiaris
ENSCHIG00000010329	BLM	100	84.590	ENSCAFG00020016111	BLM	93	93.278	Canis_lupus_dingo
ENSCHIG00000010329	BLM	100	80.282	ENSTSYG00000012368	BLM	100	80.352	Carlito_syrichta
ENSCHIG00000010329	BLM	88	83.983	ENSCAPG00000017976	BLM	100	84.127	Cavia_aperea
ENSCHIG00000010329	BLM	100	80.263	ENSCPOG00000001761	BLM	100	75.563	Cavia_porcellus
ENSCHIG00000010329	BLM	100	80.085	ENSCCAG00000023069	BLM	100	80.367	Cebus_capucinus
ENSCHIG00000010329	BLM	100	82.237	ENSCATG00000040609	BLM	92	92.722	Cercocebus_atys
ENSCHIG00000010329	BLM	100	80.592	ENSCLAG00000012111	BLM	100	76.355	Chinchilla_lanigera
ENSCHIG00000010329	BLM	100	81.908	ENSCSAG00000017040	BLM	100	81.359	Chlorocebus_sabaeus
ENSCHIG00000010329	BLM	91	92.647	ENSCHOG00000006255	BLM	86	90.000	Choloepus_hoffmanni
ENSCHIG00000010329	BLM	66	80.526	ENSCPBG00000025000	BLM	90	80.526	Chrysemys_picta_bellii
ENSCHIG00000010329	BLM	88	72.125	ENSCANG00000034808	BLM	100	72.856	Colobus_angolensis_palliatus
ENSCHIG00000010329	BLM	100	78.289	ENSCGRG00001024897	Blm	100	76.355	Cricetulus_griseus_chok1gshd
ENSCHIG00000010329	BLM	73	70.777	ENSCGRG00000016261	Blm	96	72.269	Cricetulus_griseus_crigri
ENSCHIG00000010329	BLM	58	62.456	ENSCSEG00000013483	blm	64	62.251	Cynoglossus_semilaevis
ENSCHIG00000010329	BLM	84	65.278	ENSDARG00000077089	blm	83	65.201	Danio_rerio
ENSCHIG00000010329	BLM	99	81.188	ENSDNOG00000010159	BLM	99	79.721	Dasypus_novemcinctus
ENSCHIG00000010329	BLM	74	79.924	ENSDORG00000011033	Blm	100	80.019	Dipodomys_ordii
ENSCHIG00000010329	BLM	50	42.568	FBgn0002906	Blm	50	41.492	Drosophila_melanogaster
ENSCHIG00000010329	BLM	82	88.333	ENSETEG00000015019	BLM	82	88.333	Echinops_telfairi
ENSCHIG00000010329	BLM	100	84.211	ENSEASG00005006727	BLM	100	81.343	Equus_asinus_asinus
ENSCHIG00000010329	BLM	100	84.211	ENSECAG00000011405	BLM	100	83.636	Equus_caballus
ENSCHIG00000010329	BLM	98	75.217	ENSEEUG00000001434	BLM	99	73.888	Erinaceus_europaeus
ENSCHIG00000010329	BLM	83	81.301	ENSELUG00000019098	blm	56	81.301	Esox_lucius
ENSCHIG00000010329	BLM	100	85.526	ENSFCAG00000006087	BLM	100	82.241	Felis_catus
ENSCHIG00000010329	BLM	80	55.422	ENSFALG00000010981	BLM	89	55.441	Ficedula_albicollis
ENSCHIG00000010329	BLM	100	68.816	ENSFDAG00000012658	BLM	100	68.676	Fukomys_damarensis
ENSCHIG00000010329	BLM	61	60.809	ENSFHEG00000002553	blm	60	62.382	Fundulus_heteroclitus
ENSCHIG00000010329	BLM	82	77.480	ENSGMOG00000016431	blm	96	59.193	Gadus_morhua
ENSCHIG00000010329	BLM	99	57.860	ENSGALG00000008256	BLM	92	58.416	Gallus_gallus
ENSCHIG00000010329	BLM	51	78.591	ENSGAFG00000001117	blm	51	78.591	Gambusia_affinis
ENSCHIG00000010329	BLM	68	64.413	ENSGACG00000010863	blm	100	73.724	Gasterosteus_aculeatus
ENSCHIG00000010329	BLM	87	57.955	ENSGAGG00000005383	BLM	92	75.478	Gopherus_agassizii
ENSCHIG00000010329	BLM	100	82.566	ENSGGOG00000007710	BLM	92	93.531	Gorilla_gorilla
ENSCHIG00000010329	BLM	86	72.664	ENSHBUG00000015943	blm	56	72.664	Haplochromis_burtoni
ENSCHIG00000010329	BLM	100	77.746	ENSHGLG00000013231	BLM	99	77.676	Heterocephalus_glaber_female
ENSCHIG00000010329	BLM	57	70.897	ENSHCOG00000011455	blm	72	72.664	Hippocampus_comes
ENSCHIG00000010329	BLM	79	52.065	ENSIPUG00000000529	blm	59	76.786	Ictalurus_punctatus
ENSCHIG00000010329	BLM	100	78.496	ENSSTOG00000005000	BLM	100	78.848	Ictidomys_tridecemlineatus
ENSCHIG00000010329	BLM	66	84.494	ENSJJAG00000016322	Blm	94	84.494	Jaculus_jaculus
ENSCHIG00000010329	BLM	74	54.147	ENSKMAG00000016608	blm	59	62.919	Kryptolebias_marmoratus
ENSCHIG00000010329	BLM	55	75.501	ENSLACG00000006490	BLM	99	50.809	Latimeria_chalumnae
ENSCHIG00000010329	BLM	79	52.840	ENSLOCG00000014302	blm	86	63.090	Lepisosteus_oculatus
ENSCHIG00000010329	BLM	100	81.908	ENSMFAG00000042982	BLM	92	93.261	Macaca_fascicularis
ENSCHIG00000010329	BLM	100	82.237	ENSMMUG00000019526	BLM	92	93.261	Macaca_mulatta
ENSCHIG00000010329	BLM	97	81.250	ENSMNEG00000031251	BLM	92	92.992	Macaca_nemestrina
ENSCHIG00000010329	BLM	100	81.908	ENSMLEG00000032934	BLM	100	78.717	Mandrillus_leucophaeus
ENSCHIG00000010329	BLM	60	81.301	ENSMAMG00000008726	blm	57	81.301	Mastacembelus_armatus
ENSCHIG00000010329	BLM	86	72.664	ENSMZEG00005022323	blm	64	72.664	Maylandia_zebra
ENSCHIG00000010329	BLM	100	78.618	ENSMAUG00000008953	Blm	99	76.053	Mesocricetus_auratus
ENSCHIG00000010329	BLM	100	81.728	ENSMICG00000034442	BLM	100	81.748	Microcebus_murinus
ENSCHIG00000010329	BLM	100	75.658	ENSMOCG00000016367	Blm	99	75.843	Microtus_ochrogaster
ENSCHIG00000010329	BLM	65	70.737	ENSMMOG00000006959	blm	60	70.737	Mola_mola
ENSCHIG00000010329	BLM	99	70.588	ENSMODG00000019449	BLM	99	64.145	Monodelphis_domestica
ENSCHIG00000010329	BLM	68	71.694	ENSMALG00000007323	blm	63	71.694	Monopterus_albus
ENSCHIG00000010329	BLM	100	77.303	MGP_CAROLIEiJ_G0029907	Blm	100	74.087	Mus_caroli
ENSCHIG00000010329	BLM	100	77.303	ENSMUSG00000030528	Blm	100	74.214	Mus_musculus
ENSCHIG00000010329	BLM	100	77.632	MGP_PahariEiJ_G0013129	Blm	100	75.000	Mus_pahari
ENSCHIG00000010329	BLM	100	77.632	MGP_SPRETEiJ_G0031009	Blm	100	74.492	Mus_spretus
ENSCHIG00000010329	BLM	83	84.615	ENSMPUG00000015657	BLM	99	81.328	Mustela_putorius_furo
ENSCHIG00000010329	BLM	100	80.534	ENSMLUG00000014697	BLM	100	80.604	Myotis_lucifugus
ENSCHIG00000010329	BLM	100	78.618	ENSNGAG00000001275	Blm	100	76.582	Nannospalax_galili
ENSCHIG00000010329	BLM	86	72.706	ENSNBRG00000019702	blm	60	80.217	Neolamprologus_brichardi
ENSCHIG00000010329	BLM	100	81.250	ENSNLEG00000012087	BLM	100	81.914	Nomascus_leucogenys
ENSCHIG00000010329	BLM	99	65.909	ENSMEUG00000007253	BLM	99	60.936	Notamacropus_eugenii
ENSCHIG00000010329	BLM	95	94.637	ENSOPRG00000011667	BLM	90	94.637	Ochotona_princeps
ENSCHIG00000010329	BLM	72	80.399	ENSODEG00000015373	BLM	100	76.510	Octodon_degus
ENSCHIG00000010329	BLM	86	72.146	ENSONIG00000015193	blm	89	62.295	Oreochromis_niloticus
ENSCHIG00000010329	BLM	54	82.422	ENSOANG00000009316	-	99	82.185	Ornithorhynchus_anatinus
ENSCHIG00000010329	BLM	99	76.159	ENSOCUG00000013969	BLM	99	74.700	Oryctolagus_cuniculus
ENSCHIG00000010329	BLM	86	72.897	ENSORLG00000008110	blm	80	72.897	Oryzias_latipes
ENSCHIG00000010329	BLM	86	72.897	ENSORLG00020004812	blm	80	72.897	Oryzias_latipes_hni
ENSCHIG00000010329	BLM	88	63.938	ENSORLG00015018640	blm	79	73.131	Oryzias_latipes_hsok
ENSCHIG00000010329	BLM	55	72.749	ENSOMEG00000023545	blm	62	72.749	Oryzias_melastigma
ENSCHIG00000010329	BLM	100	76.056	ENSOGAG00000005708	BLM	100	76.127	Otolemur_garnettii
ENSCHIG00000010329	BLM	100	97.971	ENSOARG00000012875	BLM	100	97.971	Ovis_aries
ENSCHIG00000010329	BLM	100	82.392	ENSPPAG00000032173	BLM	100	81.818	Pan_paniscus
ENSCHIG00000010329	BLM	100	85.526	ENSPPRG00000002471	BLM	100	82.523	Panthera_pardus
ENSCHIG00000010329	BLM	100	83.882	ENSPTIG00000016168	BLM	100	82.055	Panthera_tigris_altaica
ENSCHIG00000010329	BLM	100	82.392	ENSPTRG00000007460	BLM	100	81.466	Pan_troglodytes
ENSCHIG00000010329	BLM	100	81.908	ENSPANG00000018572	BLM	92	92.992	Papio_anubis
ENSCHIG00000010329	BLM	87	71.560	ENSPKIG00000008954	blm	80	71.560	Paramormyrops_kingsleyae
ENSCHIG00000010329	BLM	51	67.680	ENSPMGG00000006629	blm	80	67.175	Periophthalmus_magnuspinnatus
ENSCHIG00000010329	BLM	100	79.344	ENSPEMG00000017348	Blm	100	75.896	Peromyscus_maniculatus_bairdii
ENSCHIG00000010329	BLM	50	58.824	ENSPMAG00000000445	blm	96	59.104	Petromyzon_marinus
ENSCHIG00000010329	BLM	99	69.307	ENSPCIG00000006609	BLM	99	63.736	Phascolarctos_cinereus
ENSCHIG00000010329	BLM	52	75.897	ENSPFOG00000005059	blm	56	65.217	Poecilia_formosa
ENSCHIG00000010329	BLM	54	79.133	ENSPLAG00000017344	blm	77	79.133	Poecilia_latipinna
ENSCHIG00000010329	BLM	55	64.917	ENSPMEG00000000321	blm	56	65.217	Poecilia_mexicana
ENSCHIG00000010329	BLM	51	78.320	ENSPREG00000007715	blm	56	64.676	Poecilia_reticulata
ENSCHIG00000010329	BLM	100	81.908	ENSPPYG00000006784	BLM	100	79.845	Pongo_abelii
ENSCHIG00000010329	BLM	73	90.909	ENSPCAG00000008960	BLM	73	90.909	Procavia_capensis
ENSCHIG00000010329	BLM	96	82.566	ENSPCOG00000000439	BLM	100	76.831	Propithecus_coquereli
ENSCHIG00000010329	BLM	82	95.652	ENSPVAG00000011642	BLM	88	95.484	Pteropus_vampyrus
ENSCHIG00000010329	BLM	88	51.243	ENSPNYG00000010956	blm	61	50.824	Pundamilia_nyererei
ENSCHIG00000010329	BLM	58	73.488	ENSPNAG00000011714	blm	61	72.172	Pygocentrus_nattereri
ENSCHIG00000010329	BLM	100	75.738	ENSRNOG00000011213	Blm	100	73.751	Rattus_norvegicus
ENSCHIG00000010329	BLM	100	82.392	ENSRBIG00000029656	BLM	100	84.564	Rhinopithecus_bieti
ENSCHIG00000010329	BLM	100	82.392	ENSRROG00000037871	BLM	92	91.914	Rhinopithecus_roxellana
ENSCHIG00000010329	BLM	91	80.373	ENSSBOG00000030957	BLM	100	80.462	Saimiri_boliviensis_boliviensis
ENSCHIG00000010329	BLM	99	63.125	ENSSHAG00000007988	BLM	99	62.867	Sarcophilus_harrisii
ENSCHIG00000010329	BLM	54	72.143	ENSSFOG00015015462	blm	58	72.143	Scleropages_formosus
ENSCHIG00000010329	BLM	54	72.619	ENSSDUG00000010955	blm	51	72.619	Seriola_dumerili
ENSCHIG00000010329	BLM	67	71.562	ENSSLDG00000000634	blm	62	71.562	Seriola_lalandi_dorsalis
ENSCHIG00000010329	BLM	90	79.276	ENSSARG00000006398	BLM	96	75.182	Sorex_araneus
ENSCHIG00000010329	BLM	74	58.019	ENSSPUG00000000013	BLM	96	55.497	Sphenodon_punctatus
ENSCHIG00000010329	BLM	65	70.602	ENSSPAG00000013999	blm	80	70.602	Stegastes_partitus
ENSCHIG00000010329	BLM	100	86.047	ENSSSCG00000001816	BLM	99	85.298	Sus_scrofa
ENSCHIG00000010329	BLM	77	54.847	ENSTGUG00000009959	-	99	50.813	Taeniopygia_guttata
ENSCHIG00000010329	BLM	79	50.688	ENSTRUG00000019860	blm	82	50.462	Takifugu_rubripes
ENSCHIG00000010329	BLM	72	78.591	ENSTNIG00000019246	blm	53	78.591	Tetraodon_nigroviridis
ENSCHIG00000010329	BLM	78	92.562	ENSTBEG00000006706	BLM	76	92.562	Tupaia_belangeri
ENSCHIG00000010329	BLM	100	88.158	ENSTTRG00000016386	BLM	100	86.742	Tursiops_truncatus
ENSCHIG00000010329	BLM	100	85.197	ENSUMAG00000009105	BLM	97	93.023	Ursus_maritimus
ENSCHIG00000010329	BLM	99	87.162	ENSVPAG00000000085	BLM	99	82.287	Vicugna_pacos
ENSCHIG00000010329	BLM	95	96.238	ENSVVUG00000006402	BLM	100	90.934	Vulpes_vulpes
ENSCHIG00000010329	BLM	99	56.250	ENSXETG00000007847	blm	54	72.669	Xenopus_tropicalis
ENSCHIG00000010329	BLM	51	71.274	ENSXCOG00000020227	blm	55	61.047	Xiphophorus_couchianus
ENSCHIG00000010329	BLM	51	77.778	ENSXMAG00000002951	blm	56	63.939	Xiphophorus_maculatus