EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000010341 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 1074 bases
Position: chr8:3412083-3413156
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000006513	zf-C2H2	PF00096.26	8.7e-32	1	7
ENSCHIP00000006513	zf-C2H2	PF00096.26	8.7e-32	2	7
ENSCHIP00000006513	zf-C2H2	PF00096.26	8.7e-32	3	7
ENSCHIP00000006513	zf-C2H2	PF00096.26	8.7e-32	4	7
ENSCHIP00000006513	zf-C2H2	PF00096.26	8.7e-32	5	7
ENSCHIP00000006513	zf-C2H2	PF00096.26	8.7e-32	6	7
ENSCHIP00000006513	zf-C2H2	PF00096.26	8.7e-32	7	7
ENSCHIP00000006513	zf-met	PF12874.7	6.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000014239	-	1074	-	ENSCHIP00000006513	357 (aa)	-	UPI000D194FD6

Gene Model

Click here to download ENSCHIG00000010341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000010341's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000010341	-	73	37.023	ENSCHIG00000014415	ZNF81	68	37.023
ENSCHIG00000010341	-	100	98.599	ENSCHIG00000021040	-	85	98.599

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000010341	-	99	81.180	ENSAMEG00000015824	GTF3A	98	81.461	Ailuropoda_melanoleuca
ENSCHIG00000010341	-	100	96.078	ENSBTAG00000012600	GTF3A	100	96.078	Bos_taurus
ENSCHIG00000010341	-	98	81.250	ENSCAFG00000006794	GTF3A	97	81.250	Canis_familiaris
ENSCHIG00000010341	-	91	77.812	ENSTSYG00000004206	GTF3A	98	78.116	Carlito_syrichta
ENSCHIG00000010341	-	86	80.657	ENSCAPG00000015862	GTF3A	99	79.297	Cavia_aperea
ENSCHIG00000010341	-	91	78.659	ENSCPOG00000010143	GTF3A	99	79.573	Cavia_porcellus
ENSCHIG00000010341	-	87	80.831	ENSCLAG00000003912	GTF3A	95	82.428	Chinchilla_lanigera
ENSCHIG00000010341	-	99	76.602	ENSDNOG00000037405	-	85	77.159	Dasypus_novemcinctus
ENSCHIG00000010341	-	74	78.218	ENSETEG00000003225	GTF3A	75	76.923	Echinops_telfairi
ENSCHIG00000010341	-	90	72.136	ENSEASG00005013216	-	86	72.136	Equus_asinus_asinus
ENSCHIG00000010341	-	97	82.184	ENSEASG00005022495	-	80	80.952	Equus_asinus_asinus
ENSCHIG00000010341	-	97	82.759	ENSECAG00000014803	GTF3A	82	83.039	Equus_caballus
ENSCHIG00000010341	-	91	77.231	ENSECAG00000024825	-	75	77.231	Equus_caballus
ENSCHIG00000010341	-	99	78.090	ENSEEUG00000004307	GTF3A	87	78.652	Erinaceus_europaeus
ENSCHIG00000010341	-	99	82.303	ENSFCAG00000006982	GTF3A	83	82.303	Felis_catus
ENSCHIG00000010341	-	87	83.601	ENSFDAG00000016841	GTF3A	96	83.923	Fukomys_damarensis
ENSCHIG00000010341	-	87	84.244	ENSHGLG00000004173	GTF3A	97	84.887	Heterocephalus_glaber_female
ENSCHIG00000010341	-	87	84.244	ENSHGLG00100011561	GTF3A	97	84.887	Heterocephalus_glaber_male
ENSCHIG00000010341	-	87	82.109	ENSSTOG00000013853	GTF3A	100	83.387	Ictidomys_tridecemlineatus
ENSCHIG00000010341	-	82	79.783	ENSJJAG00000011501	Gtf3a	88	81.013	Jaculus_jaculus
ENSCHIG00000010341	-	99	74.105	ENSLAFG00000027315	GTF3A	98	74.105	Loxodonta_africana
ENSCHIG00000010341	-	99	76.536	ENSMAUG00000016253	Gtf3a	95	77.493	Mesocricetus_auratus
ENSCHIG00000010341	-	99	79.387	ENSMICG00000014763	GTF3A	97	80.501	Microcebus_murinus
ENSCHIG00000010341	-	95	79.412	MGP_CAROLIEiJ_G0028031	Gtf3a	97	77.410	Mus_caroli
ENSCHIG00000010341	-	95	79.412	ENSMUSG00000016503	Gtf3a	93	79.412	Mus_musculus
ENSCHIG00000010341	-	93	79.341	MGP_PahariEiJ_G0024597	Gtf3a	94	78.882	Mus_pahari
ENSCHIG00000010341	-	98	77.841	MGP_SPRETEiJ_G0029029	Gtf3a	97	77.841	Mus_spretus
ENSCHIG00000010341	-	99	81.232	ENSMPUG00000005835	GTF3A	97	81.513	Mustela_putorius_furo
ENSCHIG00000010341	-	92	85.152	ENSMLUG00000002158	GTF3A	99	85.455	Myotis_lucifugus
ENSCHIG00000010341	-	99	80.447	ENSNLEG00000000331	GTF3A	98	80.726	Nomascus_leucogenys
ENSCHIG00000010341	-	90	55.556	ENSMEUG00000010089	GTF3A	97	55.090	Notamacropus_eugenii
ENSCHIG00000010341	-	99	70.904	ENSOPRG00000000854	-	88	70.904	Ochotona_princeps
ENSCHIG00000010341	-	99	78.212	ENSODEG00000006725	GTF3A	84	79.330	Octodon_degus
ENSCHIG00000010341	-	99	81.073	ENSOCUG00000011713	GTF3A	81	81.073	Oryctolagus_cuniculus
ENSCHIG00000010341	-	99	79.109	ENSOGAG00000014589	GTF3A	98	79.944	Otolemur_garnettii
ENSCHIG00000010341	-	100	93.277	ENSOARG00000012551	GTF3A	98	93.277	Ovis_aries
ENSCHIG00000010341	-	99	82.584	ENSPPRG00000002368	GTF3A	98	82.584	Panthera_pardus
ENSCHIG00000010341	-	89	81.443	ENSPTIG00000018958	GTF3A	80	81.443	Panthera_tigris_altaica
ENSCHIG00000010341	-	83	53.478	ENSPSIG00000011722	GTF3A	84	53.478	Pelodiscus_sinensis
ENSCHIG00000010341	-	97	79.830	ENSPPYG00000005235	GTF3A	98	80.114	Pongo_abelii
ENSCHIG00000010341	-	99	77.437	ENSPCOG00000016742	GTF3A	81	79.387	Propithecus_coquereli
ENSCHIG00000010341	-	99	79.155	ENSPVAG00000012837	GTF3A	84	79.155	Pteropus_vampyrus
ENSCHIG00000010341	-	99	72.905	ENSRROG00000043264	GTF3A	98	73.184	Rhinopithecus_roxellana
ENSCHIG00000010341	-	89	74.766	ENSSHAG00000016965	GTF3A	93	73.414	Sarcophilus_harrisii
ENSCHIG00000010341	-	87	71.383	ENSSARG00000010692	GTF3A	86	72.026	Sorex_araneus
ENSCHIG00000010341	-	85	67.752	ENSSPUG00000005307	GTF3A	91	63.905	Sphenodon_punctatus
ENSCHIG00000010341	-	80	44.983	ENSTRUG00000005241	gtf3ab	88	44.516	Takifugu_rubripes
ENSCHIG00000010341	-	80	82.812	ENSTBEG00000012075	GTF3A	61	82.812	Tupaia_belangeri
ENSCHIG00000010341	-	98	79.202	ENSTTRG00000008538	GTF3A	85	79.202	Tursiops_truncatus
ENSCHIG00000010341	-	99	81.180	ENSUAMG00000019189	GTF3A	98	81.461	Ursus_americanus
ENSCHIG00000010341	-	91	79.635	ENSUMAG00000016941	GTF3A	100	82.724	Ursus_maritimus
ENSCHIG00000010341	-	88	81.119	ENSVPAG00000004995	GTF3A	96	81.469	Vicugna_pacos
ENSCHIG00000010341	-	99	80.000	ENSVVUG00000009197	GTF3A	98	80.000	Vulpes_vulpes