EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000010787 (Gene tree)
Gene ID: 102183176
Gene Symbol: SRSF1
Alias: -
Full Name: serine and arginine rich splicing factor 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 1727 bases
Position: chr19:8410420-8412146
Accession: 102183176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000007207	RRM_1	PF00076.22	1.6e-33	1	2
ENSCHIP00000007207	RRM_1	PF00076.22	1.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000014947	SRSF1-201	747	XM_005693095	ENSCHIP00000007207	248 (aa)	XP_005693152	UPI0000001220

Gene Model

Click here to download ENSCHIG00000010787's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03040	Spliceosome	KEGG
chx04657	IL-17 signaling pathway	KEGG
chx05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000010787's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000010787	SRSF1	78	41.148	ENSCHIG00000009148	-	57	40.191
ENSCHIG00000010787	SRSF1	78	42.584	ENSCHIG00000015890	-	57	41.148
ENSCHIG00000010787	SRSF1	77	69.271	ENSCHIG00000025274	SRSF9	82	69.271
ENSCHIG00000010787	SRSF1	65	46.988	ENSCHIG00000016794	SRSF5	59	45.509

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000010787	SRSF1	100	100.000	ENSG00000136450	SRSF1	100	100.000	Homo_sapiens
ENSCHIG00000010787	SRSF1	79	91.133	ENSAPOG00000008542	-	81	89.655	Acanthochromis_polyacanthus
ENSCHIG00000010787	SRSF1	78	91.710	ENSAPOG00000002748	-	78	89.119	Acanthochromis_polyacanthus
ENSCHIG00000010787	SRSF1	100	97.177	ENSAMEG00000002635	SRSF1	100	97.177	Ailuropoda_melanoleuca
ENSCHIG00000010787	SRSF1	78	91.710	ENSACIG00000008091	srsf1a	83	89.637	Amphilophus_citrinellus
ENSCHIG00000010787	SRSF1	79	91.133	ENSAOCG00000000337	-	82	89.655	Amphiprion_ocellaris
ENSCHIG00000010787	SRSF1	78	92.228	ENSAOCG00000010671	-	83	90.155	Amphiprion_ocellaris
ENSCHIG00000010787	SRSF1	79	91.133	ENSAPEG00000023352	-	81	89.655	Amphiprion_percula
ENSCHIG00000010787	SRSF1	78	92.228	ENSAPEG00000009915	-	83	90.155	Amphiprion_percula
ENSCHIG00000010787	SRSF1	78	92.228	ENSATEG00000022403	-	77	90.155	Anabas_testudineus
ENSCHIG00000010787	SRSF1	82	87.192	ENSATEG00000021567	-	81	88.325	Anabas_testudineus
ENSCHIG00000010787	SRSF1	100	98.387	ENSACAG00000005542	-	100	98.387	Anolis_carolinensis
ENSCHIG00000010787	SRSF1	81	73.500	ENSANAG00000025417	-	75	71.574	Aotus_nancymaae
ENSCHIG00000010787	SRSF1	99	100.000	ENSANAG00000020583	-	99	98.611	Aotus_nancymaae
ENSCHIG00000010787	SRSF1	94	91.632	ENSAMXG00000035996	srsf1a	79	92.965	Astyanax_mexicanus
ENSCHIG00000010787	SRSF1	54	78.065	ENSAMXG00000024373	-	72	76.282	Astyanax_mexicanus
ENSCHIG00000010787	SRSF1	100	100.000	ENSBTAG00000014766	SRSF1	100	100.000	Bos_taurus
ENSCHIG00000010787	SRSF1	99	100.000	ENSCJAG00000041713	-	99	98.611	Callithrix_jacchus
ENSCHIG00000010787	SRSF1	79	91.837	ENSCJAG00000008111	-	88	91.371	Callithrix_jacchus
ENSCHIG00000010787	SRSF1	99	100.000	ENSCAFG00000017430	SRSF1	97	100.000	Canis_familiaris
ENSCHIG00000010787	SRSF1	99	100.000	ENSCAFG00020025632	-	97	100.000	Canis_lupus_dingo
ENSCHIG00000010787	SRSF1	99	100.000	ENSTSYG00000013899	-	99	98.611	Carlito_syrichta
ENSCHIG00000010787	SRSF1	100	100.000	ENSCPOG00000032681	-	100	100.000	Cavia_porcellus
ENSCHIG00000010787	SRSF1	100	100.000	ENSCCAG00000029484	-	100	100.000	Cebus_capucinus
ENSCHIG00000010787	SRSF1	99	100.000	ENSCATG00000042294	-	99	98.611	Cercocebus_atys
ENSCHIG00000010787	SRSF1	100	100.000	ENSCLAG00000014707	-	100	100.000	Chinchilla_lanigera
ENSCHIG00000010787	SRSF1	99	99.187	ENSCSAG00000005642	-	97	99.187	Chlorocebus_sabaeus
ENSCHIG00000010787	SRSF1	100	100.000	ENSCHOG00000001899	SRSF1	100	100.000	Choloepus_hoffmanni
ENSCHIG00000010787	SRSF1	100	98.790	ENSCPBG00000009851	-	100	98.790	Chrysemys_picta_bellii
ENSCHIG00000010787	SRSF1	99	100.000	ENSCANG00000029726	-	99	98.611	Colobus_angolensis_palliatus
ENSCHIG00000010787	SRSF1	99	100.000	ENSCGRG00001000670	Srsf1	97	100.000	Cricetulus_griseus_chok1gshd
ENSCHIG00000010787	SRSF1	100	100.000	ENSCGRG00000005590	Srsf1	100	100.000	Cricetulus_griseus_crigri
ENSCHIG00000010787	SRSF1	79	83.962	ENSCSEG00000009973	-	81	83.019	Cynoglossus_semilaevis
ENSCHIG00000010787	SRSF1	78	91.327	ENSCSEG00000014272	-	81	86.528	Cynoglossus_semilaevis
ENSCHIG00000010787	SRSF1	78	89.744	ENSCVAG00000005458	-	91	89.617	Cyprinodon_variegatus
ENSCHIG00000010787	SRSF1	78	92.228	ENSCVAG00000018617	-	78	90.155	Cyprinodon_variegatus
ENSCHIG00000010787	SRSF1	78	89.706	ENSDARG00000057691	srsf1a	99	87.958	Danio_rerio
ENSCHIG00000010787	SRSF1	99	96.735	ENSDARG00000017843	srsf1b	99	96.735	Danio_rerio
ENSCHIG00000010787	SRSF1	99	100.000	ENSDNOG00000011737	-	97	100.000	Dasypus_novemcinctus
ENSCHIG00000010787	SRSF1	100	100.000	ENSDORG00000015082	Srsf1	100	100.000	Dipodomys_ordii
ENSCHIG00000010787	SRSF1	74	98.913	ENSETEG00000005349	-	63	98.913	Echinops_telfairi
ENSCHIG00000010787	SRSF1	99	100.000	ENSEASG00005002922	-	97	100.000	Equus_asinus_asinus
ENSCHIG00000010787	SRSF1	100	100.000	ENSECAG00000016654	SRSF1	100	100.000	Equus_caballus
ENSCHIG00000010787	SRSF1	74	100.000	ENSEEUG00000009255	-	63	100.000	Erinaceus_europaeus
ENSCHIG00000010787	SRSF1	78	93.299	ENSELUG00000021646	srsf1a	77	89.691	Esox_lucius
ENSCHIG00000010787	SRSF1	99	100.000	ENSFCAG00000002250	-	97	100.000	Felis_catus
ENSCHIG00000010787	SRSF1	99	81.707	ENSFALG00000005062	-	97	81.707	Ficedula_albicollis
ENSCHIG00000010787	SRSF1	100	100.000	ENSFDAG00000010646	-	100	100.000	Fukomys_damarensis
ENSCHIG00000010787	SRSF1	78	92.228	ENSFHEG00000003174	srsf1a	83	90.155	Fundulus_heteroclitus
ENSCHIG00000010787	SRSF1	80	89.394	ENSGMOG00000014787	-	80	86.528	Gadus_morhua
ENSCHIG00000010787	SRSF1	100	98.790	ENSGALG00000005525	SRSF1	100	98.790	Gallus_gallus
ENSCHIG00000010787	SRSF1	79	86.802	ENSGACG00000020621	srsf1b	80	84.772	Gasterosteus_aculeatus
ENSCHIG00000010787	SRSF1	99	98.780	ENSGAGG00000022965	-	97	98.780	Gopherus_agassizii
ENSCHIG00000010787	SRSF1	99	100.000	ENSGGOG00000004386	SRSF1	99	98.611	Gorilla_gorilla
ENSCHIG00000010787	SRSF1	78	91.710	ENSHBUG00000016788	srsf1a	80	89.637	Haplochromis_burtoni
ENSCHIG00000010787	SRSF1	87	100.000	ENSHGLG00000000600	-	100	100.000	Heterocephalus_glaber_female
ENSCHIG00000010787	SRSF1	87	100.000	ENSHGLG00000000669	-	100	100.000	Heterocephalus_glaber_female
ENSCHIG00000010787	SRSF1	100	100.000	ENSHGLG00100016906	-	100	100.000	Heterocephalus_glaber_male
ENSCHIG00000010787	SRSF1	78	87.310	ENSHCOG00000018918	srsf1a	77	87.817	Hippocampus_comes
ENSCHIG00000010787	SRSF1	94	91.213	ENSIPUG00000017039	srsf1a	79	93.467	Ictalurus_punctatus
ENSCHIG00000010787	SRSF1	100	95.968	ENSIPUG00000008750	srsf1b	100	95.968	Ictalurus_punctatus
ENSCHIG00000010787	SRSF1	100	100.000	ENSSTOG00000000243	-	100	100.000	Ictidomys_tridecemlineatus
ENSCHIG00000010787	SRSF1	51	92.126	ENSJJAG00000014464	-	95	88.189	Jaculus_jaculus
ENSCHIG00000010787	SRSF1	100	100.000	ENSJJAG00000000102	-	100	100.000	Jaculus_jaculus
ENSCHIG00000010787	SRSF1	78	92.228	ENSKMAG00000019232	srsf1a	78	88.601	Kryptolebias_marmoratus
ENSCHIG00000010787	SRSF1	79	84.500	ENSLBEG00000015294	-	80	85.500	Labrus_bergylta
ENSCHIG00000010787	SRSF1	78	91.192	ENSLBEG00000020864	-	83	89.119	Labrus_bergylta
ENSCHIG00000010787	SRSF1	78	94.845	ENSLACG00000014160	srsf1a	73	93.299	Latimeria_chalumnae
ENSCHIG00000010787	SRSF1	100	97.177	ENSLOCG00000005994	srsf1a	100	97.177	Lepisosteus_oculatus
ENSCHIG00000010787	SRSF1	100	100.000	ENSLAFG00000025743	SRSF1	100	100.000	Loxodonta_africana
ENSCHIG00000010787	SRSF1	100	100.000	ENSMFAG00000040003	-	100	100.000	Macaca_fascicularis
ENSCHIG00000010787	SRSF1	99	100.000	ENSMMUG00000004725	SRSF1	99	98.611	Macaca_mulatta
ENSCHIG00000010787	SRSF1	99	97.154	ENSMMUG00000003260	-	97	97.154	Macaca_mulatta
ENSCHIG00000010787	SRSF1	99	100.000	ENSMNEG00000027680	-	99	98.611	Macaca_nemestrina
ENSCHIG00000010787	SRSF1	99	96.748	ENSMNEG00000015983	-	97	96.748	Macaca_nemestrina
ENSCHIG00000010787	SRSF1	99	94.309	ENSMLEG00000015243	-	97	94.309	Mandrillus_leucophaeus
ENSCHIG00000010787	SRSF1	100	100.000	ENSMLEG00000040509	SRSF1	100	100.000	Mandrillus_leucophaeus
ENSCHIG00000010787	SRSF1	78	92.228	ENSMAMG00000018454	-	78	90.155	Mastacembelus_armatus
ENSCHIG00000010787	SRSF1	79	90.355	ENSMAMG00000019687	-	80	87.817	Mastacembelus_armatus
ENSCHIG00000010787	SRSF1	79	94.924	ENSMAMG00000019691	-	81	91.878	Mastacembelus_armatus
ENSCHIG00000010787	SRSF1	100	100.000	ENSMAUG00000021845	Srsf1	100	100.000	Mesocricetus_auratus
ENSCHIG00000010787	SRSF1	99	100.000	ENSMICG00000013639	-	99	98.611	Microcebus_murinus
ENSCHIG00000010787	SRSF1	100	100.000	ENSMOCG00000001996	Srsf1	100	100.000	Microtus_ochrogaster
ENSCHIG00000010787	SRSF1	78	90.674	ENSMMOG00000014354	srsf1a	83	88.601	Mola_mola
ENSCHIG00000010787	SRSF1	74	98.919	ENSMODG00000014781	-	63	98.919	Monodelphis_domestica
ENSCHIG00000010787	SRSF1	78	91.710	ENSMALG00000017129	-	75	88.601	Monopterus_albus
ENSCHIG00000010787	SRSF1	82	77.941	ENSMALG00000007763	-	79	79.695	Monopterus_albus
ENSCHIG00000010787	SRSF1	100	100.000	MGP_CAROLIEiJ_G0016943	Srsf1	100	100.000	Mus_caroli
ENSCHIG00000010787	SRSF1	100	100.000	ENSMUSG00000018379	Srsf1	100	100.000	Mus_musculus
ENSCHIG00000010787	SRSF1	100	100.000	MGP_PahariEiJ_G0018074	Srsf1	100	100.000	Mus_pahari
ENSCHIG00000010787	SRSF1	100	100.000	MGP_SPRETEiJ_G0017790	Srsf1	100	100.000	Mus_spretus
ENSCHIG00000010787	SRSF1	100	100.000	ENSMPUG00000015369	SRSF1	100	100.000	Mustela_putorius_furo
ENSCHIG00000010787	SRSF1	82	90.640	ENSMLUG00000023995	-	79	89.340	Myotis_lucifugus
ENSCHIG00000010787	SRSF1	100	100.000	ENSMLUG00000011040	SRSF1	100	100.000	Myotis_lucifugus
ENSCHIG00000010787	SRSF1	100	100.000	ENSNGAG00000011395	Srsf1	100	100.000	Nannospalax_galili
ENSCHIG00000010787	SRSF1	100	79.839	ENSNBRG00000008041	srsf1b	80	82.741	Neolamprologus_brichardi
ENSCHIG00000010787	SRSF1	99	100.000	ENSNLEG00000008088	-	99	98.611	Nomascus_leucogenys
ENSCHIG00000010787	SRSF1	51	98.425	ENSMEUG00000002783	-	100	98.425	Notamacropus_eugenii
ENSCHIG00000010787	SRSF1	74	100.000	ENSOPRG00000001234	-	100	100.000	Ochotona_princeps
ENSCHIG00000010787	SRSF1	100	99.597	ENSODEG00000011481	-	100	99.597	Octodon_degus
ENSCHIG00000010787	SRSF1	78	91.710	ENSONIG00000013160	-	77	89.637	Oreochromis_niloticus
ENSCHIG00000010787	SRSF1	96	90.717	ENSONIG00000004860	-	81	90.863	Oreochromis_niloticus
ENSCHIG00000010787	SRSF1	100	70.238	ENSOCUG00000010894	-	77	71.795	Oryctolagus_cuniculus
ENSCHIG00000010787	SRSF1	78	92.228	ENSORLG00000004580	srsf1a	78	90.155	Oryzias_latipes
ENSCHIG00000010787	SRSF1	78	92.228	ENSORLG00020009456	srsf1a	83	90.155	Oryzias_latipes_hni
ENSCHIG00000010787	SRSF1	78	92.228	ENSORLG00015014384	srsf1a	83	90.155	Oryzias_latipes_hsok
ENSCHIG00000010787	SRSF1	71	90.341	ENSOMEG00000004106	srsf1a	71	88.068	Oryzias_melastigma
ENSCHIG00000010787	SRSF1	100	100.000	ENSOGAG00000025950	-	100	100.000	Otolemur_garnettii
ENSCHIG00000010787	SRSF1	100	95.161	ENSOARG00000008323	SRSF1	100	95.161	Ovis_aries
ENSCHIG00000010787	SRSF1	100	100.000	ENSPPAG00000043403	-	100	100.000	Pan_paniscus
ENSCHIG00000010787	SRSF1	100	100.000	ENSPPRG00000004238	-	100	100.000	Panthera_pardus
ENSCHIG00000010787	SRSF1	99	100.000	ENSPTRG00000049077	SRSF1	99	98.611	Pan_troglodytes
ENSCHIG00000010787	SRSF1	99	100.000	ENSPANG00000022305	-	99	98.611	Papio_anubis
ENSCHIG00000010787	SRSF1	100	75.806	ENSPANG00000030275	-	76	96.899	Papio_anubis
ENSCHIG00000010787	SRSF1	100	95.968	ENSPKIG00000012857	srsf1b	100	95.968	Paramormyrops_kingsleyae
ENSCHIG00000010787	SRSF1	99	95.102	ENSPKIG00000007204	srsf1a	99	95.102	Paramormyrops_kingsleyae
ENSCHIG00000010787	SRSF1	79	90.955	ENSPSIG00000009000	-	78	97.917	Pelodiscus_sinensis
ENSCHIG00000010787	SRSF1	96	84.937	ENSPMGG00000005467	-	78	84.456	Periophthalmus_magnuspinnatus
ENSCHIG00000010787	SRSF1	78	89.394	ENSPMGG00000013112	-	79	91.414	Periophthalmus_magnuspinnatus
ENSCHIG00000010787	SRSF1	100	100.000	ENSPEMG00000021416	Srsf1	100	100.000	Peromyscus_maniculatus_bairdii
ENSCHIG00000010787	SRSF1	100	99.197	ENSPCIG00000006076	-	100	99.197	Phascolarctos_cinereus
ENSCHIG00000010787	SRSF1	79	89.899	ENSPFOG00000018325	-	70	89.691	Poecilia_formosa
ENSCHIG00000010787	SRSF1	79	89.899	ENSPLAG00000008416	srsf1b	79	89.691	Poecilia_latipinna
ENSCHIG00000010787	SRSF1	50	89.431	ENSPMEG00000020607	-	98	87.805	Poecilia_mexicana
ENSCHIG00000010787	SRSF1	79	89.899	ENSPMEG00000002388	-	79	89.691	Poecilia_mexicana
ENSCHIG00000010787	SRSF1	50	89.431	ENSPMEG00000014312	-	98	87.805	Poecilia_mexicana
ENSCHIG00000010787	SRSF1	78	92.228	ENSPREG00000009667	srsf1a	78	90.155	Poecilia_reticulata
ENSCHIG00000010787	SRSF1	100	100.000	ENSPPYG00000008240	SRSF1	100	100.000	Pongo_abelii
ENSCHIG00000010787	SRSF1	100	100.000	ENSPCAG00000005199	SRSF1	100	100.000	Procavia_capensis
ENSCHIG00000010787	SRSF1	100	100.000	ENSPCOG00000023654	-	100	100.000	Propithecus_coquereli
ENSCHIG00000010787	SRSF1	80	76.733	ENSPCOG00000025736	-	95	76.531	Propithecus_coquereli
ENSCHIG00000010787	SRSF1	75	100.000	ENSPVAG00000000519	-	75	100.000	Pteropus_vampyrus
ENSCHIG00000010787	SRSF1	100	94.355	ENSPNAG00000014601	srsf1b	100	94.355	Pygocentrus_nattereri
ENSCHIG00000010787	SRSF1	94	93.162	ENSPNAG00000022241	srsf1a	78	90.206	Pygocentrus_nattereri
ENSCHIG00000010787	SRSF1	100	100.000	ENSRNOG00000050323	Srsf1	100	100.000	Rattus_norvegicus
ENSCHIG00000010787	SRSF1	99	100.000	ENSRBIG00000034445	-	99	98.611	Rhinopithecus_bieti
ENSCHIG00000010787	SRSF1	100	100.000	ENSRROG00000041506	-	100	100.000	Rhinopithecus_roxellana
ENSCHIG00000010787	SRSF1	100	100.000	ENSSBOG00000025377	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCHIG00000010787	SRSF1	100	99.197	ENSSHAG00000002552	-	100	99.197	Sarcophilus_harrisii
ENSCHIG00000010787	SRSF1	99	96.356	ENSSFOG00015004800	srsf1a	99	96.356	Scleropages_formosus
ENSCHIG00000010787	SRSF1	94	87.083	ENSSMAG00000009719	-	80	86.275	Scophthalmus_maximus
ENSCHIG00000010787	SRSF1	78	90.674	ENSSMAG00000007018	-	78	88.083	Scophthalmus_maximus
ENSCHIG00000010787	SRSF1	100	76.494	ENSSDUG00000003929	-	84	84.500	Seriola_dumerili
ENSCHIG00000010787	SRSF1	78	91.192	ENSSDUG00000011303	-	83	89.119	Seriola_dumerili
ENSCHIG00000010787	SRSF1	78	91.192	ENSSLDG00000010543	-	78	89.119	Seriola_lalandi_dorsalis
ENSCHIG00000010787	SRSF1	95	76.695	ENSSLDG00000016895	-	78	83.422	Seriola_lalandi_dorsalis
ENSCHIG00000010787	SRSF1	79	83.838	ENSSLDG00000016868	-	78	83.838	Seriola_lalandi_dorsalis
ENSCHIG00000010787	SRSF1	74	100.000	ENSSARG00000010949	-	63	100.000	Sorex_araneus
ENSCHIG00000010787	SRSF1	99	98.780	ENSSPUG00000000804	-	97	98.780	Sphenodon_punctatus
ENSCHIG00000010787	SRSF1	79	88.038	ENSSPAG00000014152	-	81	87.081	Stegastes_partitus
ENSCHIG00000010787	SRSF1	78	92.746	ENSSPAG00000022562	-	78	90.674	Stegastes_partitus
ENSCHIG00000010787	SRSF1	100	100.000	ENSSSCG00000017626	-	100	100.000	Sus_scrofa
ENSCHIG00000010787	SRSF1	74	98.370	ENSTGUG00000008416	-	100	98.370	Taeniopygia_guttata
ENSCHIG00000010787	SRSF1	78	91.192	ENSTRUG00000003691	srsf1a	78	89.119	Takifugu_rubripes
ENSCHIG00000010787	SRSF1	78	91.192	ENSTNIG00000016223	srsf1a	77	89.119	Tetraodon_nigroviridis
ENSCHIG00000010787	SRSF1	74	98.370	ENSTBEG00000015378	-	63	98.370	Tupaia_belangeri
ENSCHIG00000010787	SRSF1	74	100.000	ENSTTRG00000007310	SRSF1	100	100.000	Tursiops_truncatus
ENSCHIG00000010787	SRSF1	100	100.000	ENSUAMG00000009858	SRSF1	100	100.000	Ursus_americanus
ENSCHIG00000010787	SRSF1	99	100.000	ENSUMAG00000000455	-	97	100.000	Ursus_maritimus
ENSCHIG00000010787	SRSF1	100	99.597	ENSVPAG00000010094	SRSF1	100	99.597	Vicugna_pacos
ENSCHIG00000010787	SRSF1	99	100.000	ENSVVUG00000011882	-	97	100.000	Vulpes_vulpes
ENSCHIG00000010787	SRSF1	100	95.968	ENSXETG00000008954	srsf1	100	91.386	Xenopus_tropicalis
ENSCHIG00000010787	SRSF1	78	92.228	ENSXMAG00000011766	srsf1a	78	90.155	Xiphophorus_maculatus