EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000010894 (Gene tree)
Gene ID: 102177204
Gene Symbol: -
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 6486 bases
Position: chr2:16490328-16496813
Accession: 102177204
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000007425	RRM_1	PF00076.22	4.3e-59	1	4
ENSCHIP00000007425	RRM_1	PF00076.22	4.3e-59	2	4
ENSCHIP00000007425	RRM_1	PF00076.22	4.3e-59	3	4
ENSCHIP00000007425	RRM_1	PF00076.22	4.3e-59	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000015167	-	2004	XM_018058282	ENSCHIP00000007425	667 (aa)	XP_017913771	UPI000D18F4B5

Gene Model

Click here to download ENSCHIG00000010894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000010894's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000010894	-	53	77.358	ENSCHIG00000003401	-	79	76.991
ENSCHIG00000010894	-	91	88.689	ENSCHIG00000026149	-	86	89.672
ENSCHIG00000010894	-	69	98.673	ENSCHIG00000021052	-	83	98.252
ENSCHIG00000010894	-	91	66.281	ENSCHIG00000012665	-	87	65.372
ENSCHIG00000010894	-	51	33.871	ENSCHIG00000020214	TIA1	97	33.858
ENSCHIG00000010894	-	52	32.184	ENSCHIG00000023714	PABPC1	96	30.000
ENSCHIG00000010894	-	69	82.932	ENSCHIG00000012143	-	86	78.654

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000010894	-	76	92.857	ENSG00000115053	NCL	100	89.865	Homo_sapiens
ENSCHIG00000010894	-	66	98.405	ENSAMEG00000016289	NCL	85	88.543	Ailuropoda_melanoleuca
ENSCHIG00000010894	-	100	67.612	ENSANAG00000024378	-	76	79.570	Aotus_nancymaae
ENSCHIG00000010894	-	66	96.811	ENSANAG00000035814	-	85	85.831	Aotus_nancymaae
ENSCHIG00000010894	-	91	92.857	ENSBTAG00000051320	-	76	92.488	Bos_taurus
ENSCHIG00000010894	-	51	92.623	ENSBTAG00000050728	-	77	92.623	Bos_taurus
ENSCHIG00000010894	-	75	94.314	ENSBTAG00000026909	-	84	94.314	Bos_taurus
ENSCHIG00000010894	-	100	97.019	ENSBTAG00000016174	NCL	96	96.274	Bos_taurus
ENSCHIG00000010894	-	57	96.306	ENSCJAG00000013538	NCL	84	85.784	Callithrix_jacchus
ENSCHIG00000010894	-	100	89.717	ENSCAFG00000011037	NCL	85	88.633	Canis_familiaris
ENSCHIG00000010894	-	99	89.955	ENSCAFG00020023145	NCL	89	88.557	Canis_lupus_dingo
ENSCHIG00000010894	-	91	86.179	ENSTSYG00000004355	-	85	86.016	Carlito_syrichta
ENSCHIG00000010894	-	94	85.741	ENSTSYG00000029779	-	89	83.488	Carlito_syrichta
ENSCHIG00000010894	-	65	80.787	ENSTSYG00000036886	-	84	71.829	Carlito_syrichta
ENSCHIG00000010894	-	66	89.522	ENSCAPG00000009405	NCL	85	80.000	Cavia_aperea
ENSCHIG00000010894	-	66	93.850	ENSCPOG00000001034	NCL	85	83.089	Cavia_porcellus
ENSCHIG00000010894	-	57	96.306	ENSCCAG00000021040	-	85	85.714	Cebus_capucinus
ENSCHIG00000010894	-	98	87.557	ENSCATG00000037033	NCL	85	86.623	Cercocebus_atys
ENSCHIG00000010894	-	100	84.741	ENSCLAG00000013080	NCL	85	82.927	Chinchilla_lanigera
ENSCHIG00000010894	-	66	97.045	ENSCSAG00000006660	NCL	95	97.045	Chlorocebus_sabaeus
ENSCHIG00000010894	-	66	76.018	ENSCHOG00000012860	NCL	88	75.847	Choloepus_hoffmanni
ENSCHIG00000010894	-	58	91.753	ENSCANG00000036756	NCL	88	92.708	Colobus_angolensis_palliatus
ENSCHIG00000010894	-	91	66.884	ENSCGRG00001022350	-	87	66.667	Cricetulus_griseus_chok1gshd
ENSCHIG00000010894	-	91	79.772	ENSCGRG00001024315	-	84	77.325	Cricetulus_griseus_chok1gshd
ENSCHIG00000010894	-	91	80.813	ENSCGRG00000017894	-	87	78.630	Cricetulus_griseus_crigri
ENSCHIG00000010894	-	92	66.016	ENSCGRG00000000507	-	85	64.286	Cricetulus_griseus_crigri
ENSCHIG00000010894	-	91	76.230	ENSDNOG00000046347	-	93	73.582	Dasypus_novemcinctus
ENSCHIG00000010894	-	100	84.501	ENSDNOG00000010783	-	85	85.270	Dasypus_novemcinctus
ENSCHIG00000010894	-	55	73.497	ENSDORG00000023596	-	85	67.323	Dipodomys_ordii
ENSCHIG00000010894	-	57	84.433	ENSDORG00000012513	-	84	74.590	Dipodomys_ordii
ENSCHIG00000010894	-	69	66.938	ENSETEG00000008139	-	81	66.757	Echinops_telfairi
ENSCHIG00000010894	-	57	90.451	ENSETEG00000014756	-	86	90.501	Echinops_telfairi
ENSCHIG00000010894	-	66	61.036	ENSETEG00000008553	-	88	60.449	Echinops_telfairi
ENSCHIG00000010894	-	57	91.053	ENSETEG00000018937	-	84	81.384	Echinops_telfairi
ENSCHIG00000010894	-	100	89.583	ENSEASG00005008488	NCL	87	89.052	Equus_asinus_asinus
ENSCHIG00000010894	-	100	90.030	ENSECAG00000021868	NCL	85	89.542	Equus_caballus
ENSCHIG00000010894	-	57	90.501	ENSEEUG00000005913	NCL	84	80.229	Erinaceus_europaeus
ENSCHIG00000010894	-	98	89.498	ENSFCAG00000027622	NCL	85	88.138	Felis_catus
ENSCHIG00000010894	-	100	84.024	ENSFDAG00000014291	NCL	85	81.609	Fukomys_damarensis
ENSCHIG00000010894	-	98	85.281	ENSGGOG00000004300	NCL	93	84.127	Gorilla_gorilla
ENSCHIG00000010894	-	66	95.444	ENSHGLG00000002031	-	85	81.463	Heterocephalus_glaber_female
ENSCHIG00000010894	-	66	95.216	ENSHGLG00100014537	-	84	79.545	Heterocephalus_glaber_male
ENSCHIG00000010894	-	70	84.800	ENSHGLG00100000745	-	74	84.881	Heterocephalus_glaber_male
ENSCHIG00000010894	-	66	79.271	ENSJJAG00000016165	Ncl	87	76.290	Jaculus_jaculus
ENSCHIG00000010894	-	91	71.829	ENSLAFG00000013061	NCL	78	83.871	Loxodonta_africana
ENSCHIG00000010894	-	98	88.012	ENSMFAG00000040385	NCL	85	86.949	Macaca_fascicularis
ENSCHIG00000010894	-	98	88.012	ENSMMUG00000018094	NCL	85	86.949	Macaca_mulatta
ENSCHIG00000010894	-	76	92.460	ENSMNEG00000023839	NCL	73	93.056	Macaca_nemestrina
ENSCHIG00000010894	-	98	87.709	ENSMLEG00000028935	NCL	85	86.786	Mandrillus_leucophaeus
ENSCHIG00000010894	-	92	55.556	ENSMICG00000029975	-	75	78.824	Microcebus_murinus
ENSCHIG00000010894	-	100	86.507	ENSMICG00000002538	-	85	85.832	Microcebus_murinus
ENSCHIG00000010894	-	91	75.817	MGP_CAROLIEiJ_G0014362	Ncl	85	73.171	Mus_caroli
ENSCHIG00000010894	-	91	76.634	ENSMUSG00000026234	Ncl	85	73.984	Mus_musculus
ENSCHIG00000010894	-	91	76.020	MGP_PahariEiJ_G0027599	Ncl	85	76.183	Mus_pahari
ENSCHIG00000010894	-	91	77.614	MGP_SPRETEiJ_G0015164	Ncl	85	77.614	Mus_spretus
ENSCHIG00000010894	-	91	86.872	ENSMLUG00000014547	NCL	85	86.386	Myotis_lucifugus
ENSCHIG00000010894	-	91	78.331	ENSNGAG00000002454	-	85	74.757	Nannospalax_galili
ENSCHIG00000010894	-	98	73.872	ENSNLEG00000014107	-	94	75.320	Nomascus_leucogenys
ENSCHIG00000010894	-	66	90.433	ENSODEG00000003281	-	93	81.009	Octodon_degus
ENSCHIG00000010894	-	80	78.829	ENSODEG00000002441	-	88	71.595	Octodon_degus
ENSCHIG00000010894	-	66	63.356	ENSODEG00000007803	-	83	63.238	Octodon_degus
ENSCHIG00000010894	-	70	90.186	ENSODEG00000002748	-	65	83.521	Octodon_degus
ENSCHIG00000010894	-	83	94.545	ENSOCUG00000004312	NCL	85	86.310	Oryctolagus_cuniculus
ENSCHIG00000010894	-	64	87.335	ENSOGAG00000027852	NCL	69	87.335	Otolemur_garnettii
ENSCHIG00000010894	-	91	80.528	ENSOARG00000013710	-	94	82.730	Ovis_aries
ENSCHIG00000010894	-	72	89.691	ENSOARG00000013270	-	89	94.505	Ovis_aries
ENSCHIG00000010894	-	98	94.385	ENSOARG00000020709	-	94	94.545	Ovis_aries
ENSCHIG00000010894	-	91	72.893	ENSOARG00000004072	-	92	72.982	Ovis_aries
ENSCHIG00000010894	-	74	97.727	ENSPPAG00000011619	NCL	85	86.949	Pan_paniscus
ENSCHIG00000010894	-	98	89.954	ENSPPRG00000012603	NCL	85	88.468	Panthera_pardus
ENSCHIG00000010894	-	98	89.954	ENSPTIG00000010393	NCL	85	88.468	Panthera_tigris_altaica
ENSCHIG00000010894	-	98	85.736	ENSPTRG00000013025	NCL	93	84.524	Pan_troglodytes
ENSCHIG00000010894	-	98	88.012	ENSPANG00000010292	NCL	85	86.949	Papio_anubis
ENSCHIG00000010894	-	76	85.178	ENSPPYG00000013265	NCL	85	80.065	Pongo_abelii
ENSCHIG00000010894	-	89	86.379	ENSPCOG00000003051	-	84	86.161	Propithecus_coquereli
ENSCHIG00000010894	-	91	80.629	ENSPCOG00000004160	-	77	90.212	Propithecus_coquereli
ENSCHIG00000010894	-	100	89.185	ENSPVAG00000000297	NCL	85	87.317	Pteropus_vampyrus
ENSCHIG00000010894	-	91	79.119	ENSRNOG00000018273	Ncl	85	79.445	Rattus_norvegicus
ENSCHIG00000010894	-	89	82.293	ENSRBIG00000037525	-	63	89.640	Rhinopithecus_bieti
ENSCHIG00000010894	-	98	83.206	ENSRROG00000036103	-	91	84.293	Rhinopithecus_roxellana
ENSCHIG00000010894	-	89	86.477	ENSRROG00000028756	-	85	86.297	Rhinopithecus_roxellana
ENSCHIG00000010894	-	76	85.236	ENSSBOG00000027549	-	77	89.294	Saimiri_boliviensis_boliviensis
ENSCHIG00000010894	-	57	96.042	ENSSBOG00000029193	-	85	86.297	Saimiri_boliviensis_boliviensis
ENSCHIG00000010894	-	65	74.429	ENSSBOG00000023094	-	69	74.661	Saimiri_boliviensis_boliviensis
ENSCHIG00000010894	-	91	87.825	ENSSSCG00000016275	NCL	85	87.013	Sus_scrofa
ENSCHIG00000010894	-	72	80.000	ENSTBEG00000002469	-	61	80.571	Tupaia_belangeri
ENSCHIG00000010894	-	59	83.641	ENSTBEG00000001546	-	85	78.689	Tupaia_belangeri
ENSCHIG00000010894	-	91	86.743	ENSTTRG00000009094	NCL	85	86.416	Tursiops_truncatus
ENSCHIG00000010894	-	74	94.724	ENSUAMG00000005639	NCL	100	93.651	Ursus_americanus
ENSCHIG00000010894	-	66	98.178	ENSUMAG00000015789	NCL	85	87.150	Ursus_maritimus
ENSCHIG00000010894	-	66	86.022	ENSVPAG00000001796	NCL	62	86.022	Vicugna_pacos
ENSCHIG00000010894	-	100	87.034	ENSVVUG00000025564	NCL	93	86.507	Vulpes_vulpes