EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000010955 (Gene tree)
Gene ID: 102189827
Gene Symbol: CNOT4
Alias: CLONE243|NOT4|NOT4H
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 79570 bases
Position: chr4:21134617-21214186
Accession: 102189827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000007469	RRM_1	PF00076.22	9.4e-06	1	1
ENSCHIP00000007455	RRM_1	PF00076.22	1.1e-05	1	1
ENSCHIP00000007478	RRM_1	PF00076.22	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000015222	CNOT4-203	4502	XM_005679495	ENSCHIP00000007478	713 (aa)	XP_005679552	UPI0003AFCC98
ENSCHIT00000015213	CNOT4-202	1917	XM_005679499	ENSCHIP00000007469	572 (aa)	XP_005679556	UPI0003AF937C
ENSCHIT00000015199	CNOT4-201	4386	XM_005679497	ENSCHIP00000007455	639 (aa)	XP_005679554	UPI0003AF53C5

Gene Model

Click here to download ENSCHIG00000010955's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000010955's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000010955	CNOT4	100	99.301	ENSG00000080802	CNOT4	100	99.301	Homo_sapiens
ENSCHIG00000010955	CNOT4	93	90.566	ENSAPOG00000016272	cnot4a	95	77.960	Acanthochromis_polyacanthus
ENSCHIG00000010955	CNOT4	97	98.551	ENSAMEG00000012081	CNOT4	91	99.535	Ailuropoda_melanoleuca
ENSCHIG00000010955	CNOT4	100	64.545	ENSACIG00000003011	cnot4a	100	60.471	Amphilophus_citrinellus
ENSCHIG00000010955	CNOT4	99	90.566	ENSAOCG00000010792	cnot4a	92	89.299	Amphiprion_ocellaris
ENSCHIG00000010955	CNOT4	99	90.566	ENSAPEG00000004680	cnot4a	92	89.299	Amphiprion_percula
ENSCHIG00000010955	CNOT4	99	90.189	ENSATEG00000017580	cnot4a	92	88.930	Anabas_testudineus
ENSCHIG00000010955	CNOT4	100	88.320	ENSAPLG00000016441	CNOT4	100	88.320	Anas_platyrhynchos
ENSCHIG00000010955	CNOT4	100	88.189	ENSACAG00000011154	CNOT4	100	88.189	Anolis_carolinensis
ENSCHIG00000010955	CNOT4	100	99.476	ENSANAG00000032156	CNOT4	100	99.476	Aotus_nancymaae
ENSCHIG00000010955	CNOT4	99	90.566	ENSACLG00000002514	cnot4a	92	88.321	Astatotilapia_calliptera
ENSCHIG00000010955	CNOT4	100	92.620	ENSAMXG00000011473	cnot4b	100	72.363	Astyanax_mexicanus
ENSCHIG00000010955	CNOT4	100	72.936	ENSAMXG00000001373	cnot4a	100	72.018	Astyanax_mexicanus
ENSCHIG00000010955	CNOT4	100	99.579	ENSBTAG00000017919	CNOT4	100	99.579	Bos_taurus
ENSCHIG00000010955	CNOT4	100	99.476	ENSCJAG00000012532	CNOT4	100	99.476	Callithrix_jacchus
ENSCHIG00000010955	CNOT4	100	99.825	ENSCAFG00000003223	CNOT4	100	99.825	Canis_familiaris
ENSCHIG00000010955	CNOT4	100	99.825	ENSCAFG00020000093	CNOT4	100	99.825	Canis_lupus_dingo
ENSCHIG00000010955	CNOT4	100	99.650	ENSTSYG00000000893	CNOT4	100	99.650	Carlito_syrichta
ENSCHIG00000010955	CNOT4	100	94.704	ENSCAPG00000006213	CNOT4	100	94.704	Cavia_aperea
ENSCHIG00000010955	CNOT4	100	98.427	ENSCPOG00000011526	CNOT4	100	98.427	Cavia_porcellus
ENSCHIG00000010955	CNOT4	100	98.783	ENSCCAG00000024414	CNOT4	100	98.783	Cebus_capucinus
ENSCHIG00000010955	CNOT4	100	98.783	ENSCATG00000022607	CNOT4	100	98.783	Cercocebus_atys
ENSCHIG00000010955	CNOT4	100	98.951	ENSCLAG00000001857	CNOT4	100	98.951	Chinchilla_lanigera
ENSCHIG00000010955	CNOT4	100	98.177	ENSCSAG00000009096	CNOT4	100	98.177	Chlorocebus_sabaeus
ENSCHIG00000010955	CNOT4	68	99.465	ENSCHOG00000010412	CNOT4	63	99.465	Choloepus_hoffmanni
ENSCHIG00000010955	CNOT4	100	95.652	ENSCPBG00000004959	CNOT4	100	95.652	Chrysemys_picta_bellii
ENSCHIG00000010955	CNOT4	68	69.323	ENSCING00000004364	-	93	42.365	Ciona_intestinalis
ENSCHIG00000010955	CNOT4	100	99.301	ENSCANG00000029319	CNOT4	100	99.301	Colobus_angolensis_palliatus
ENSCHIG00000010955	CNOT4	100	98.609	ENSCGRG00001014651	Cnot4	100	98.609	Cricetulus_griseus_chok1gshd
ENSCHIG00000010955	CNOT4	100	99.301	ENSCGRG00000005727	Cnot4	100	99.301	Cricetulus_griseus_crigri
ENSCHIG00000010955	CNOT4	94	90.566	ENSCSEG00000015080	cnot4a	84	89.299	Cynoglossus_semilaevis
ENSCHIG00000010955	CNOT4	99	90.566	ENSCVAG00000009399	cnot4a	100	74.080	Cyprinodon_variegatus
ENSCHIG00000010955	CNOT4	100	70.370	ENSDARG00000007045	cnot4a	100	69.330	Danio_rerio
ENSCHIG00000010955	CNOT4	100	67.593	ENSDARG00000007639	cnot4b	100	66.091	Danio_rerio
ENSCHIG00000010955	CNOT4	100	98.036	ENSDNOG00000009409	CNOT4	100	98.036	Dasypus_novemcinctus
ENSCHIG00000010955	CNOT4	100	98.609	ENSDORG00000012268	Cnot4	100	98.609	Dipodomys_ordii
ENSCHIG00000010955	CNOT4	100	92.567	ENSETEG00000013407	CNOT4	89	95.089	Echinops_telfairi
ENSCHIG00000010955	CNOT4	100	98.435	ENSEASG00005014430	CNOT4	100	98.435	Equus_asinus_asinus
ENSCHIG00000010955	CNOT4	100	98.435	ENSECAG00000020262	CNOT4	100	98.435	Equus_caballus
ENSCHIG00000010955	CNOT4	100	73.669	ENSELUG00000011540	cnot4b	97	72.113	Esox_lucius
ENSCHIG00000010955	CNOT4	99	90.637	ENSELUG00000008742	cnot4a	90	90.637	Esox_lucius
ENSCHIG00000010955	CNOT4	100	99.825	ENSFCAG00000011904	CNOT4	100	99.825	Felis_catus
ENSCHIG00000010955	CNOT4	100	88.714	ENSFALG00000011194	CNOT4	100	88.714	Ficedula_albicollis
ENSCHIG00000010955	CNOT4	100	98.609	ENSFDAG00000013525	CNOT4	100	98.609	Fukomys_damarensis
ENSCHIG00000010955	CNOT4	100	89.259	ENSFHEG00000006608	cnot4a	100	72.838	Fundulus_heteroclitus
ENSCHIG00000010955	CNOT4	96	59.395	ENSGMOG00000001329	cnot4a	97	62.211	Gadus_morhua
ENSCHIG00000010955	CNOT4	100	94.951	ENSGALG00000011682	CNOT4	100	94.951	Gallus_gallus
ENSCHIG00000010955	CNOT4	100	73.459	ENSGACG00000004276	cnot4a	90	90.189	Gasterosteus_aculeatus
ENSCHIG00000010955	CNOT4	100	95.091	ENSGAGG00000017331	CNOT4	100	95.091	Gopherus_agassizii
ENSCHIG00000010955	CNOT4	96	94.653	ENSGGOG00000000142	CNOT4	99	98.649	Gorilla_gorilla
ENSCHIG00000010955	CNOT4	99	90.566	ENSHBUG00000000027	cnot4a	92	88.321	Haplochromis_burtoni
ENSCHIG00000010955	CNOT4	100	98.609	ENSHGLG00000011533	CNOT4	100	98.609	Heterocephalus_glaber_female
ENSCHIG00000010955	CNOT4	100	98.609	ENSHGLG00100013058	CNOT4	100	98.609	Heterocephalus_glaber_male
ENSCHIG00000010955	CNOT4	98	89.434	ENSHCOG00000015815	cnot4a	92	87.226	Hippocampus_comes
ENSCHIG00000010955	CNOT4	100	91.481	ENSIPUG00000006393	cnot4	91	91.481	Ictalurus_punctatus
ENSCHIG00000010955	CNOT4	100	71.407	ENSIPUG00000016994	cnot4b	100	70.963	Ictalurus_punctatus
ENSCHIG00000010955	CNOT4	100	99.650	ENSSTOG00000007717	CNOT4	100	99.650	Ictidomys_tridecemlineatus
ENSCHIG00000010955	CNOT4	100	99.301	ENSJJAG00000016618	Cnot4	100	99.301	Jaculus_jaculus
ENSCHIG00000010955	CNOT4	100	81.643	ENSJJAG00000019991	-	100	81.643	Jaculus_jaculus
ENSCHIG00000010955	CNOT4	93	90.566	ENSKMAG00000004581	cnot4a	100	73.588	Kryptolebias_marmoratus
ENSCHIG00000010955	CNOT4	99	90.943	ENSLBEG00000009999	cnot4a	84	90.943	Labrus_bergylta
ENSCHIG00000010955	CNOT4	100	83.694	ENSLACG00000002647	CNOT4	99	83.694	Latimeria_chalumnae
ENSCHIG00000010955	CNOT4	100	93.382	ENSLOCG00000016126	cnot4a	88	93.382	Lepisosteus_oculatus
ENSCHIG00000010955	CNOT4	100	97.055	ENSLAFG00000000709	CNOT4	100	97.055	Loxodonta_africana
ENSCHIG00000010955	CNOT4	100	99.476	ENSMFAG00000046349	CNOT4	100	99.476	Macaca_fascicularis
ENSCHIG00000010955	CNOT4	100	98.783	ENSMMUG00000016181	CNOT4	100	98.783	Macaca_mulatta
ENSCHIG00000010955	CNOT4	100	99.476	ENSMNEG00000042164	CNOT4	100	99.476	Macaca_nemestrina
ENSCHIG00000010955	CNOT4	100	99.476	ENSMLEG00000032709	CNOT4	100	99.476	Mandrillus_leucophaeus
ENSCHIG00000010955	CNOT4	99	90.566	ENSMAMG00000023194	cnot4a	92	89.299	Mastacembelus_armatus
ENSCHIG00000010955	CNOT4	99	90.566	ENSMZEG00005007312	cnot4a	92	88.321	Maylandia_zebra
ENSCHIG00000010955	CNOT4	100	88.189	ENSMGAG00000011788	CNOT4	100	88.189	Meleagris_gallopavo
ENSCHIG00000010955	CNOT4	100	98.609	ENSMAUG00000020415	Cnot4	100	98.609	Mesocricetus_auratus
ENSCHIG00000010955	CNOT4	100	99.130	ENSMICG00000001667	CNOT4	100	99.296	Microcebus_murinus
ENSCHIG00000010955	CNOT4	100	98.435	ENSMOCG00000020955	Cnot4	100	98.435	Microtus_ochrogaster
ENSCHIG00000010955	CNOT4	94	76.374	ENSMMOG00000014565	cnot4a	97	75.585	Mola_mola
ENSCHIG00000010955	CNOT4	100	96.073	ENSMODG00000014068	CNOT4	100	96.073	Monodelphis_domestica
ENSCHIG00000010955	CNOT4	93	90.566	ENSMALG00000011662	cnot4a	79	90.566	Monopterus_albus
ENSCHIG00000010955	CNOT4	100	98.955	MGP_CAROLIEiJ_G0028217	Cnot4	100	98.955	Mus_caroli
ENSCHIG00000010955	CNOT4	100	99.126	ENSMUSG00000038784	Cnot4	100	99.126	Mus_musculus
ENSCHIG00000010955	CNOT4	100	99.126	MGP_PahariEiJ_G0021974	Cnot4	100	99.126	Mus_pahari
ENSCHIG00000010955	CNOT4	100	98.776	MGP_SPRETEiJ_G0029216	Cnot4	100	98.776	Mus_spretus
ENSCHIG00000010955	CNOT4	100	98.177	ENSMPUG00000004089	CNOT4	100	98.177	Mustela_putorius_furo
ENSCHIG00000010955	CNOT4	100	98.287	ENSMLUG00000008260	CNOT4	100	98.287	Myotis_lucifugus
ENSCHIG00000010955	CNOT4	100	98.435	ENSNGAG00000015030	Cnot4	100	98.435	Nannospalax_galili
ENSCHIG00000010955	CNOT4	100	71.903	ENSNBRG00000021144	cnot4a	100	71.752	Neolamprologus_brichardi
ENSCHIG00000010955	CNOT4	100	98.457	ENSNLEG00000013352	CNOT4	100	98.457	Nomascus_leucogenys
ENSCHIG00000010955	CNOT4	84	98.394	ENSOPRG00000001023	CNOT4	90	79.855	Ochotona_princeps
ENSCHIG00000010955	CNOT4	100	97.913	ENSODEG00000012975	CNOT4	100	97.913	Octodon_degus
ENSCHIG00000010955	CNOT4	99	90.566	ENSONIG00000008656	cnot4a	92	88.321	Oreochromis_niloticus
ENSCHIG00000010955	CNOT4	100	94.825	ENSOANG00000005006	CNOT4	100	94.825	Ornithorhynchus_anatinus
ENSCHIG00000010955	CNOT4	100	98.036	ENSOCUG00000013448	CNOT4	100	98.036	Oryctolagus_cuniculus
ENSCHIG00000010955	CNOT4	100	73.926	ENSORLG00000003727	cnot4a	84	90.943	Oryzias_latipes
ENSCHIG00000010955	CNOT4	100	73.636	ENSORLG00020015684	cnot4a	100	73.030	Oryzias_latipes_hni
ENSCHIG00000010955	CNOT4	100	74.080	ENSORLG00015008470	cnot4a	100	73.466	Oryzias_latipes_hsok
ENSCHIG00000010955	CNOT4	100	73.006	ENSOMEG00000011084	cnot4a	84	90.943	Oryzias_melastigma
ENSCHIG00000010955	CNOT4	100	98.878	ENSOGAG00000015499	CNOT4	100	98.878	Otolemur_garnettii
ENSCHIG00000010955	CNOT4	100	99.860	ENSOARG00000008803	CNOT4	100	99.860	Ovis_aries
ENSCHIG00000010955	CNOT4	100	98.435	ENSPPAG00000041937	CNOT4	100	98.435	Pan_paniscus
ENSCHIG00000010955	CNOT4	100	99.130	ENSPPRG00000023940	CNOT4	100	99.130	Panthera_pardus
ENSCHIG00000010955	CNOT4	100	99.825	ENSPTIG00000016601	CNOT4	100	99.825	Panthera_tigris_altaica
ENSCHIG00000010955	CNOT4	100	98.457	ENSPTRG00000019727	CNOT4	100	98.457	Pan_troglodytes
ENSCHIG00000010955	CNOT4	100	98.609	ENSPANG00000017724	CNOT4	100	98.609	Papio_anubis
ENSCHIG00000010955	CNOT4	100	72.516	ENSPKIG00000018137	cnot4a	100	72.205	Paramormyrops_kingsleyae
ENSCHIG00000010955	CNOT4	100	87.549	ENSPSIG00000011256	CNOT4	100	87.549	Pelodiscus_sinensis
ENSCHIG00000010955	CNOT4	100	73.676	ENSPMGG00000005671	cnot4a	100	73.525	Periophthalmus_magnuspinnatus
ENSCHIG00000010955	CNOT4	100	98.435	ENSPEMG00000021566	Cnot4	100	98.435	Peromyscus_maniculatus_bairdii
ENSCHIG00000010955	CNOT4	100	96.870	ENSPCIG00000029622	CNOT4	96	95.652	Phascolarctos_cinereus
ENSCHIG00000010955	CNOT4	57	90.566	ENSPFOG00000002228	cnot4a	100	59.829	Poecilia_formosa
ENSCHIG00000010955	CNOT4	100	73.820	ENSPLAG00000001780	cnot4a	100	73.212	Poecilia_latipinna
ENSCHIG00000010955	CNOT4	100	73.820	ENSPMEG00000006852	cnot4a	100	73.212	Poecilia_mexicana
ENSCHIG00000010955	CNOT4	100	71.721	ENSPREG00000008171	cnot4a	100	70.856	Poecilia_reticulata
ENSCHIG00000010955	CNOT4	100	97.896	ENSPPYG00000018026	CNOT4	100	97.896	Pongo_abelii
ENSCHIG00000010955	CNOT4	100	99.825	ENSPCOG00000019907	CNOT4	100	99.825	Propithecus_coquereli
ENSCHIG00000010955	CNOT4	97	96.957	ENSPVAG00000004905	CNOT4	90	96.957	Pteropus_vampyrus
ENSCHIG00000010955	CNOT4	99	90.566	ENSPNYG00000004276	cnot4a	92	88.321	Pundamilia_nyererei
ENSCHIG00000010955	CNOT4	100	93.727	ENSPNAG00000008679	cnot4b	100	75.075	Pygocentrus_nattereri
ENSCHIG00000010955	CNOT4	99	91.513	ENSPNAG00000020433	cnot4a	100	71.429	Pygocentrus_nattereri
ENSCHIG00000010955	CNOT4	100	96.774	ENSRNOG00000010795	Cnot4	100	96.774	Rattus_norvegicus
ENSCHIG00000010955	CNOT4	100	98.783	ENSRBIG00000043977	CNOT4	100	98.783	Rhinopithecus_bieti
ENSCHIG00000010955	CNOT4	100	99.301	ENSSBOG00000020808	CNOT4	100	99.301	Saimiri_boliviensis_boliviensis
ENSCHIG00000010955	CNOT4	100	95.933	ENSSHAG00000013639	CNOT4	100	95.933	Sarcophilus_harrisii
ENSCHIG00000010955	CNOT4	100	91.912	ENSSFOG00015017285	CNOT4	91	92.251	Scleropages_formosus
ENSCHIG00000010955	CNOT4	99	90.406	ENSSFOG00015002019	cnot4a	91	90.406	Scleropages_formosus
ENSCHIG00000010955	CNOT4	99	90.566	ENSSMAG00000008614	cnot4a	84	90.566	Scophthalmus_maximus
ENSCHIG00000010955	CNOT4	100	71.451	ENSSDUG00000018585	cnot4b	100	71.451	Seriola_dumerili
ENSCHIG00000010955	CNOT4	99	90.566	ENSSDUG00000022635	cnot4a	92	89.299	Seriola_dumerili
ENSCHIG00000010955	CNOT4	99	90.566	ENSSLDG00000015770	cnot4a	92	89.299	Seriola_lalandi_dorsalis
ENSCHIG00000010955	CNOT4	100	62.745	ENSSLDG00000014347	cnot4b	100	57.268	Seriola_lalandi_dorsalis
ENSCHIG00000010955	CNOT4	100	95.639	ENSSPUG00000004677	CNOT4	100	95.639	Sphenodon_punctatus
ENSCHIG00000010955	CNOT4	99	90.566	ENSSPAG00000012329	cnot4a	92	89.299	Stegastes_partitus
ENSCHIG00000010955	CNOT4	100	99.650	ENSSSCG00000021354	CNOT4	100	99.650	Sus_scrofa
ENSCHIG00000010955	CNOT4	100	88.845	ENSTGUG00000009161	CNOT4	100	88.845	Taeniopygia_guttata
ENSCHIG00000010955	CNOT4	100	89.259	ENSTRUG00000016861	cnot4a	89	89.259	Takifugu_rubripes
ENSCHIG00000010955	CNOT4	100	70.548	ENSTNIG00000016000	cnot4a	100	69.648	Tetraodon_nigroviridis
ENSCHIG00000010955	CNOT4	94	96.863	ENSTBEG00000002202	CNOT4	86	93.601	Tupaia_belangeri
ENSCHIG00000010955	CNOT4	97	98.553	ENSTTRG00000005122	CNOT4	90	98.553	Tursiops_truncatus
ENSCHIG00000010955	CNOT4	100	99.130	ENSUAMG00000026759	CNOT4	100	99.130	Ursus_americanus
ENSCHIG00000010955	CNOT4	100	99.130	ENSUMAG00000015351	CNOT4	100	99.130	Ursus_maritimus
ENSCHIG00000010955	CNOT4	100	99.218	ENSVVUG00000006200	CNOT4	100	99.218	Vulpes_vulpes
ENSCHIG00000010955	CNOT4	100	98.519	ENSXETG00000010594	cnot4	92	98.519	Xenopus_tropicalis
ENSCHIG00000010955	CNOT4	94	72.949	ENSXCOG00000020824	cnot4a	98	70.884	Xiphophorus_couchianus
ENSCHIG00000010955	CNOT4	99	90.566	ENSXMAG00000016984	cnot4a	84	90.566	Xiphophorus_maculatus