EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000011077 (Gene tree)
Gene ID: 106502498
Gene Symbol: SYNJ2
Alias: INPP5H
Full Name: synaptojanin 2
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 98976 bases
Position: chr9:81855710-81954685
Accession: 106502498
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000007743	Exo_endo_phos	PF03372.23	1.2e-14	1	1
ENSCHIP00000007739	Exo_endo_phos	PF03372.23	1.3e-14	1	1
ENSCHIP00000007743	DUF1866	PF08952.11	1e-56	1	1
ENSCHIP00000007739	DUF1866	PF08952.11	1.1e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000015493	SYNJ2-202	4296	-	ENSCHIP00000007743	1431 (aa)	-	UPI000D18FF29
ENSCHIT00000015488	SYNJ2-201	4455	XM_018053411	ENSCHIP00000007739	1484 (aa)	XP_017908900	UPI000D193EDF

Gene Model

Click here to download ENSCHIG00000011077's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx00562	Inositol phosphate metabolism	KEGG
chx01100	Metabolic pathways	KEGG
chx04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000011077's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000011077	SYNJ2	74	53.571	ENSCHIG00000005095	SYNJ1	82	47.586

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000011077	SYNJ2	100	83.101	ENSG00000078269	SYNJ2	99	93.333	Homo_sapiens
ENSCHIG00000011077	SYNJ2	97	82.231	ENSAMEG00000009581	SYNJ2	100	82.094	Ailuropoda_melanoleuca
ENSCHIG00000011077	SYNJ2	99	68.254	ENSAPLG00000002563	SYNJ2	99	68.227	Anas_platyrhynchos
ENSCHIG00000011077	SYNJ2	92	69.198	ENSACAG00000004945	SYNJ2	92	69.633	Anolis_carolinensis
ENSCHIG00000011077	SYNJ2	100	82.283	ENSANAG00000026575	SYNJ2	97	87.341	Aotus_nancymaae
ENSCHIG00000011077	SYNJ2	100	95.703	ENSBTAG00000000817	SYNJ2	100	95.703	Bos_taurus
ENSCHIG00000011077	SYNJ2	100	82.548	ENSCJAG00000003570	SYNJ2	97	87.580	Callithrix_jacchus
ENSCHIG00000011077	SYNJ2	97	85.096	ENSCAFG00000000644	SYNJ2	100	85.137	Canis_familiaris
ENSCHIG00000011077	SYNJ2	100	85.052	ENSCAFG00020015809	SYNJ2	100	85.260	Canis_lupus_dingo
ENSCHIG00000011077	SYNJ2	97	82.768	ENSTSYG00000014342	SYNJ2	94	88.129	Carlito_syrichta
ENSCHIG00000011077	SYNJ2	96	79.899	ENSCAPG00000000287	SYNJ2	96	85.013	Cavia_aperea
ENSCHIG00000011077	SYNJ2	100	82.690	ENSCPOG00000009144	SYNJ2	95	89.362	Cavia_porcellus
ENSCHIG00000011077	SYNJ2	100	82.405	ENSCCAG00000025484	SYNJ2	97	87.261	Cebus_capucinus
ENSCHIG00000011077	SYNJ2	100	83.565	ENSCATG00000042943	SYNJ2	97	88.067	Cercocebus_atys
ENSCHIG00000011077	SYNJ2	100	83.245	ENSCLAG00000004730	SYNJ2	100	83.178	Chinchilla_lanigera
ENSCHIG00000011077	SYNJ2	100	83.632	ENSCSAG00000013130	SYNJ2	100	83.599	Chlorocebus_sabaeus
ENSCHIG00000011077	SYNJ2	52	91.892	ENSCHOG00000000343	-	52	91.892	Choloepus_hoffmanni
ENSCHIG00000011077	SYNJ2	99	70.185	ENSCPBG00000016273	SYNJ2	98	70.251	Chrysemys_picta_bellii
ENSCHIG00000011077	SYNJ2	98	83.220	ENSCANG00000040349	SYNJ2	97	87.787	Colobus_angolensis_palliatus
ENSCHIG00000011077	SYNJ2	99	81.875	ENSCGRG00001004257	Synj2	97	88.213	Cricetulus_griseus_chok1gshd
ENSCHIG00000011077	SYNJ2	97	81.781	ENSCGRG00000001656	Synj2	97	88.213	Cricetulus_griseus_crigri
ENSCHIG00000011077	SYNJ2	97	72.560	ENSDNOG00000015900	SYNJ2	96	81.424	Dasypus_novemcinctus
ENSCHIG00000011077	SYNJ2	97	80.384	ENSDORG00000014128	Synj2	97	79.766	Dipodomys_ordii
ENSCHIG00000011077	SYNJ2	82	86.618	ENSETEG00000017418	SYNJ2	82	86.618	Echinops_telfairi
ENSCHIG00000011077	SYNJ2	100	86.791	ENSEASG00005018902	SYNJ2	100	86.634	Equus_asinus_asinus
ENSCHIG00000011077	SYNJ2	100	86.191	ENSECAG00000012646	SYNJ2	94	86.039	Equus_caballus
ENSCHIG00000011077	SYNJ2	54	75.000	ENSEEUG00000015796	-	57	75.000	Erinaceus_europaeus
ENSCHIG00000011077	SYNJ2	100	85.149	ENSFCAG00000010854	SYNJ2	97	89.263	Felis_catus
ENSCHIG00000011077	SYNJ2	96	67.168	ENSFALG00000012593	SYNJ2	99	67.373	Ficedula_albicollis
ENSCHIG00000011077	SYNJ2	98	81.775	ENSFDAG00000016352	SYNJ2	97	86.497	Fukomys_damarensis
ENSCHIG00000011077	SYNJ2	99	69.236	ENSGALG00000013727	SYNJ2	90	73.607	Gallus_gallus
ENSCHIG00000011077	SYNJ2	99	69.631	ENSGAGG00000009857	SYNJ2	98	69.888	Gopherus_agassizii
ENSCHIG00000011077	SYNJ2	100	83.035	ENSGGOG00000012210	SYNJ2	97	87.669	Gorilla_gorilla
ENSCHIG00000011077	SYNJ2	100	83.100	ENSHGLG00000007534	SYNJ2	100	83.100	Heterocephalus_glaber_female
ENSCHIG00000011077	SYNJ2	99	82.849	ENSHGLG00100009973	SYNJ2	96	87.986	Heterocephalus_glaber_male
ENSCHIG00000011077	SYNJ2	97	82.249	ENSSTOG00000016474	SYNJ2	99	82.114	Ictidomys_tridecemlineatus
ENSCHIG00000011077	SYNJ2	98	80.354	ENSJJAG00000014436	Synj2	96	83.895	Jaculus_jaculus
ENSCHIG00000011077	SYNJ2	72	67.874	ENSLACG00000007316	SYNJ2	99	68.343	Latimeria_chalumnae
ENSCHIG00000011077	SYNJ2	97	81.201	ENSLAFG00000011979	SYNJ2	100	80.901	Loxodonta_africana
ENSCHIG00000011077	SYNJ2	93	89.028	ENSMFAG00000040552	SYNJ2	100	89.028	Macaca_fascicularis
ENSCHIG00000011077	SYNJ2	68	87.119	ENSMMUG00000007153	SYNJ2	96	87.414	Macaca_mulatta
ENSCHIG00000011077	SYNJ2	100	83.565	ENSMNEG00000017211	SYNJ2	97	88.067	Macaca_nemestrina
ENSCHIG00000011077	SYNJ2	100	80.583	ENSMLEG00000024911	SYNJ2	100	80.544	Mandrillus_leucophaeus
ENSCHIG00000011077	SYNJ2	88	73.249	ENSMGAG00000012839	SYNJ2	98	73.174	Meleagris_gallopavo
ENSCHIG00000011077	SYNJ2	99	81.402	ENSMAUG00000022212	Synj2	99	85.330	Mesocricetus_auratus
ENSCHIG00000011077	SYNJ2	100	82.419	ENSMICG00000015804	SYNJ2	97	86.624	Microcebus_murinus
ENSCHIG00000011077	SYNJ2	99	81.042	ENSMOCG00000020054	Synj2	99	86.284	Microtus_ochrogaster
ENSCHIG00000011077	SYNJ2	100	77.462	ENSMODG00000007783	SYNJ2	100	77.065	Monodelphis_domestica
ENSCHIG00000011077	SYNJ2	99	80.804	MGP_CAROLIEiJ_G0021026	Synj2	100	89.394	Mus_caroli
ENSCHIG00000011077	SYNJ2	99	80.735	ENSMUSG00000023805	Synj2	100	89.394	Mus_musculus
ENSCHIG00000011077	SYNJ2	99	80.208	MGP_PahariEiJ_G0023344	Synj2	100	88.788	Mus_pahari
ENSCHIG00000011077	SYNJ2	99	80.596	MGP_SPRETEiJ_G0021931	Synj2	100	89.242	Mus_spretus
ENSCHIG00000011077	SYNJ2	87	86.518	ENSMPUG00000005323	SYNJ2	97	86.518	Mustela_putorius_furo
ENSCHIG00000011077	SYNJ2	95	83.826	ENSMLUG00000000324	SYNJ2	100	83.474	Myotis_lucifugus
ENSCHIG00000011077	SYNJ2	99	82.418	ENSNGAG00000014859	Synj2	98	86.924	Nannospalax_galili
ENSCHIG00000011077	SYNJ2	100	79.565	ENSNLEG00000010750	SYNJ2	97	83.662	Nomascus_leucogenys
ENSCHIG00000011077	SYNJ2	92	81.281	ENSMEUG00000003493	SYNJ2	95	81.281	Notamacropus_eugenii
ENSCHIG00000011077	SYNJ2	93	78.363	ENSOPRG00000009648	SYNJ2	93	78.363	Ochotona_princeps
ENSCHIG00000011077	SYNJ2	100	82.621	ENSODEG00000007709	SYNJ2	94	89.362	Octodon_degus
ENSCHIG00000011077	SYNJ2	97	78.866	ENSOCUG00000004762	SYNJ2	100	79.524	Oryctolagus_cuniculus
ENSCHIG00000011077	SYNJ2	78	85.678	ENSOGAG00000000488	SYNJ2	100	86.792	Otolemur_garnettii
ENSCHIG00000011077	SYNJ2	97	94.376	ENSOARG00000004304	SYNJ2	100	94.376	Ovis_aries
ENSCHIG00000011077	SYNJ2	99	82.891	ENSPPAG00000028831	SYNJ2	99	82.791	Pan_paniscus
ENSCHIG00000011077	SYNJ2	100	85.007	ENSPPRG00000009068	SYNJ2	97	89.343	Panthera_pardus
ENSCHIG00000011077	SYNJ2	97	84.631	ENSPTIG00000018780	SYNJ2	94	89.295	Panthera_tigris_altaica
ENSCHIG00000011077	SYNJ2	100	83.379	ENSPTRG00000018739	SYNJ2	100	87.540	Pan_troglodytes
ENSCHIG00000011077	SYNJ2	100	83.654	ENSPANG00000010755	SYNJ2	97	88.067	Papio_anubis
ENSCHIG00000011077	SYNJ2	95	70.241	ENSPSIG00000014659	SYNJ2	97	70.034	Pelodiscus_sinensis
ENSCHIG00000011077	SYNJ2	97	81.537	ENSPEMG00000006247	Synj2	95	86.770	Peromyscus_maniculatus_bairdii
ENSCHIG00000011077	SYNJ2	100	77.859	ENSPCIG00000010179	SYNJ2	100	77.660	Phascolarctos_cinereus
ENSCHIG00000011077	SYNJ2	100	83.024	ENSPPYG00000017130	SYNJ2	100	82.750	Pongo_abelii
ENSCHIG00000011077	SYNJ2	87	90.323	ENSPCAG00000009217	SYNJ2	86	90.323	Procavia_capensis
ENSCHIG00000011077	SYNJ2	100	83.466	ENSPCOG00000026910	SYNJ2	97	88.376	Propithecus_coquereli
ENSCHIG00000011077	SYNJ2	100	82.754	ENSPVAG00000006131	SYNJ2	100	82.274	Pteropus_vampyrus
ENSCHIG00000011077	SYNJ2	99	79.627	ENSRNOG00000017114	Synj2	97	86.077	Rattus_norvegicus
ENSCHIG00000011077	SYNJ2	99	81.654	ENSRBIG00000044126	SYNJ2	100	81.417	Rhinopithecus_bieti
ENSCHIG00000011077	SYNJ2	100	83.101	ENSRROG00000027755	SYNJ2	97	87.669	Rhinopithecus_roxellana
ENSCHIG00000011077	SYNJ2	100	82.681	ENSSBOG00000034876	SYNJ2	97	87.420	Saimiri_boliviensis_boliviensis
ENSCHIG00000011077	SYNJ2	98	77.448	ENSSHAG00000018881	SYNJ2	100	77.448	Sarcophilus_harrisii
ENSCHIG00000011077	SYNJ2	99	66.953	ENSSPUG00000000491	SYNJ2	96	70.627	Sphenodon_punctatus
ENSCHIG00000011077	SYNJ2	87	90.447	ENSSSCG00000012315	SYNJ2	97	90.865	Sus_scrofa
ENSCHIG00000011077	SYNJ2	89	72.301	ENSTGUG00000011082	SYNJ2	100	72.822	Taeniopygia_guttata
ENSCHIG00000011077	SYNJ2	82	82.282	ENSTBEG00000015827	SYNJ2	85	82.282	Tupaia_belangeri
ENSCHIG00000011077	SYNJ2	100	84.203	ENSTTRG00000009677	SYNJ2	100	84.203	Tursiops_truncatus
ENSCHIG00000011077	SYNJ2	52	79.076	ENSUAMG00000021958	-	98	79.076	Ursus_americanus
ENSCHIG00000011077	SYNJ2	66	87.250	ENSUMAG00000012826	SYNJ2	96	87.250	Ursus_maritimus
ENSCHIG00000011077	SYNJ2	84	75.687	ENSVVUG00000007407	SYNJ2	100	86.897	Vulpes_vulpes
ENSCHIG00000011077	SYNJ2	91	63.997	ENSXETG00000034066	synj2	87	64.844	Xenopus_tropicalis