EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000011211 (Gene tree)
Gene ID: 102173920
Gene Symbol: SF3B2
Alias: Cus1|SAP145|SF3b1|SF3b145
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 14683 bases
Position: chr29:44546462-44561144
Accession: 102173920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000007826	DUF382	PF04037.13	1.4e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000015576	SF3B2-201	3841	XM_018042928	ENSCHIP00000007826	895 (aa)	XP_017898417	UPI0005FAA7AF

Gene Model

Click here to download ENSCHIG00000011211's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000011211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000011211	SF3B2	100	97.327	ENSG00000087365	SF3B2	99	99.683	Homo_sapiens
ENSCHIG00000011211	SF3B2	95	66.970	ENSAPOG00000001974	sf3b2	82	74.966	Acanthochromis_polyacanthus
ENSCHIG00000011211	SF3B2	100	98.774	ENSAMEG00000017206	SF3B2	100	98.774	Ailuropoda_melanoleuca
ENSCHIG00000011211	SF3B2	85	72.144	ENSACIG00000000624	sf3b2	87	73.602	Amphilophus_citrinellus
ENSCHIG00000011211	SF3B2	97	67.481	ENSAOCG00000009207	sf3b2	86	75.489	Amphiprion_ocellaris
ENSCHIG00000011211	SF3B2	97	66.555	ENSAPEG00000002762	sf3b2	84	75.619	Amphiprion_percula
ENSCHIG00000011211	SF3B2	100	66.520	ENSACAG00000008615	SF3B2	100	66.959	Anolis_carolinensis
ENSCHIG00000011211	SF3B2	100	97.108	ENSANAG00000029120	SF3B2	100	97.108	Aotus_nancymaae
ENSCHIG00000011211	SF3B2	85	73.834	ENSACLG00000014771	sf3b2	87	75.000	Astatotilapia_calliptera
ENSCHIG00000011211	SF3B2	84	72.338	ENSAMXG00000007929	sf3b2	86	77.273	Astyanax_mexicanus
ENSCHIG00000011211	SF3B2	100	99.665	ENSBTAG00000002778	SF3B2	100	99.665	Bos_taurus
ENSCHIG00000011211	SF3B2	59	51.060	WBGene00021004	sftb-2	89	51.825	Caenorhabditis_elegans
ENSCHIG00000011211	SF3B2	100	97.219	ENSCJAG00000001656	SF3B2	100	97.219	Callithrix_jacchus
ENSCHIG00000011211	SF3B2	100	98.883	ENSCAFG00000013033	SF3B2	100	98.883	Canis_familiaris
ENSCHIG00000011211	SF3B2	100	98.883	ENSCAFG00020015382	SF3B2	100	98.883	Canis_lupus_dingo
ENSCHIG00000011211	SF3B2	100	97.105	ENSTSYG00000000959	SF3B2	100	97.105	Carlito_syrichta
ENSCHIG00000011211	SF3B2	62	80.870	ENSCAPG00000006065	SF3B2	93	100.000	Cavia_aperea
ENSCHIG00000011211	SF3B2	91	94.363	ENSCPOG00000008294	SF3B2	100	94.363	Cavia_porcellus
ENSCHIG00000011211	SF3B2	100	97.219	ENSCCAG00000035256	SF3B2	100	97.219	Cebus_capucinus
ENSCHIG00000011211	SF3B2	100	97.327	ENSCATG00000042240	SF3B2	100	97.327	Cercocebus_atys
ENSCHIG00000011211	SF3B2	100	95.768	ENSCLAG00000016852	SF3B2	100	95.768	Chinchilla_lanigera
ENSCHIG00000011211	SF3B2	100	97.327	ENSCSAG00000008121	SF3B2	100	97.327	Chlorocebus_sabaeus
ENSCHIG00000011211	SF3B2	91	99.485	ENSCHOG00000001476	SF3B2	92	91.237	Choloepus_hoffmanni
ENSCHIG00000011211	SF3B2	100	73.959	ENSCPBG00000022465	SF3B2	87	88.401	Chrysemys_picta_bellii
ENSCHIG00000011211	SF3B2	72	59.293	ENSCING00000005665	-	99	59.906	Ciona_intestinalis
ENSCHIG00000011211	SF3B2	70	59.875	ENSCSAVG00000002029	-	99	59.091	Ciona_savignyi
ENSCHIG00000011211	SF3B2	100	97.327	ENSCANG00000039680	SF3B2	100	97.327	Colobus_angolensis_palliatus
ENSCHIG00000011211	SF3B2	100	96.214	ENSCGRG00001015741	Sf3b2	100	96.214	Cricetulus_griseus_chok1gshd
ENSCHIG00000011211	SF3B2	100	96.214	ENSCGRG00000018110	Sf3b2	100	96.214	Cricetulus_griseus_crigri
ENSCHIG00000011211	SF3B2	74	75.150	ENSCSEG00000000230	sf3b2	78	77.760	Cynoglossus_semilaevis
ENSCHIG00000011211	SF3B2	84	71.654	ENSCVAG00000003357	sf3b2	85	71.765	Cyprinodon_variegatus
ENSCHIG00000011211	SF3B2	79	74.412	ENSDARG00000018049	sf3b2	86	73.077	Danio_rerio
ENSCHIG00000011211	SF3B2	100	96.425	ENSDNOG00000009484	SF3B2	100	96.425	Dasypus_novemcinctus
ENSCHIG00000011211	SF3B2	100	95.662	ENSDORG00000002495	Sf3b2	100	95.662	Dipodomys_ordii
ENSCHIG00000011211	SF3B2	84	88.889	ENSETEG00000020284	SF3B2	85	88.759	Echinops_telfairi
ENSCHIG00000011211	SF3B2	98	58.983	ENSEBUG00000013703	sf3b2	99	60.262	Eptatretus_burgeri
ENSCHIG00000011211	SF3B2	100	98.438	ENSEASG00005004508	SF3B2	100	98.438	Equus_asinus_asinus
ENSCHIG00000011211	SF3B2	100	98.438	ENSECAG00000024461	SF3B2	100	98.438	Equus_caballus
ENSCHIG00000011211	SF3B2	60	100.000	ENSEEUG00000014278	-	60	100.000	Erinaceus_europaeus
ENSCHIG00000011211	SF3B2	97	66.848	ENSELUG00000005586	sf3b2	86	72.050	Esox_lucius
ENSCHIG00000011211	SF3B2	100	98.994	ENSFCAG00000013289	SF3B2	100	98.994	Felis_catus
ENSCHIG00000011211	SF3B2	78	71.023	ENSFALG00000014653	SF3B2	98	68.785	Ficedula_albicollis
ENSCHIG00000011211	SF3B2	100	97.010	ENSFDAG00000019806	SF3B2	100	97.010	Fukomys_damarensis
ENSCHIG00000011211	SF3B2	84	70.337	ENSFHEG00000020968	sf3b2	86	72.114	Fundulus_heteroclitus
ENSCHIG00000011211	SF3B2	72	78.015	ENSGMOG00000012131	sf3b2	96	80.945	Gadus_morhua
ENSCHIG00000011211	SF3B2	97	67.338	ENSGAFG00000001675	sf3b2	86	71.189	Gambusia_affinis
ENSCHIG00000011211	SF3B2	72	79.231	ENSGACG00000019012	sf3b2	96	80.284	Gasterosteus_aculeatus
ENSCHIG00000011211	SF3B2	100	80.710	ENSGAGG00000023916	SF3B2	86	84.100	Gopherus_agassizii
ENSCHIG00000011211	SF3B2	100	97.327	ENSGGOG00000028448	SF3B2	100	99.717	Gorilla_gorilla
ENSCHIG00000011211	SF3B2	85	73.834	ENSHBUG00000017349	sf3b2	87	74.869	Haplochromis_burtoni
ENSCHIG00000011211	SF3B2	100	95.657	ENSHGLG00000010807	SF3B2	100	95.657	Heterocephalus_glaber_female
ENSCHIG00000011211	SF3B2	100	97.550	ENSHGLG00100006361	SF3B2	100	97.550	Heterocephalus_glaber_male
ENSCHIG00000011211	SF3B2	97	66.629	ENSHCOG00000016203	sf3b2	97	64.439	Hippocampus_comes
ENSCHIG00000011211	SF3B2	81	72.260	ENSIPUG00000009383	sf3b2	85	72.691	Ictalurus_punctatus
ENSCHIG00000011211	SF3B2	100	97.996	ENSSTOG00000028892	SF3B2	100	97.996	Ictidomys_tridecemlineatus
ENSCHIG00000011211	SF3B2	100	96.004	ENSJJAG00000018193	Sf3b2	100	96.004	Jaculus_jaculus
ENSCHIG00000011211	SF3B2	59	88.158	ENSKMAG00000020181	sf3b2	84	73.879	Kryptolebias_marmoratus
ENSCHIG00000011211	SF3B2	97	68.687	ENSLBEG00000027739	sf3b2	88	78.898	Labrus_bergylta
ENSCHIG00000011211	SF3B2	71	80.564	ENSLACG00000010429	SF3B2	86	74.131	Latimeria_chalumnae
ENSCHIG00000011211	SF3B2	100	95.866	ENSLAFG00000002128	SF3B2	100	95.866	Loxodonta_africana
ENSCHIG00000011211	SF3B2	100	97.219	ENSMFAG00000003064	SF3B2	100	97.219	Macaca_fascicularis
ENSCHIG00000011211	SF3B2	100	93.520	ENSMMUG00000011743	SF3B2	100	93.520	Macaca_mulatta
ENSCHIG00000011211	SF3B2	100	97.216	ENSMNEG00000034437	SF3B2	100	97.216	Macaca_nemestrina
ENSCHIG00000011211	SF3B2	100	97.327	ENSMLEG00000029373	SF3B2	100	97.327	Mandrillus_leucophaeus
ENSCHIG00000011211	SF3B2	84	74.644	ENSMAMG00000014103	sf3b2	86	75.974	Mastacembelus_armatus
ENSCHIG00000011211	SF3B2	85	73.834	ENSMZEG00005020789	sf3b2	86	75.000	Maylandia_zebra
ENSCHIG00000011211	SF3B2	65	98.333	ENSMAUG00000017040	Sf3b2	100	98.333	Mesocricetus_auratus
ENSCHIG00000011211	SF3B2	100	93.423	ENSMICG00000016942	-	83	94.993	Microcebus_murinus
ENSCHIG00000011211	SF3B2	100	96.882	ENSMICG00000008565	-	100	96.882	Microcebus_murinus
ENSCHIG00000011211	SF3B2	100	95.880	ENSMOCG00000003136	Sf3b2	100	95.880	Microtus_ochrogaster
ENSCHIG00000011211	SF3B2	97	66.402	ENSMMOG00000012928	sf3b2	86	72.178	Mola_mola
ENSCHIG00000011211	SF3B2	87	91.656	ENSMODG00000008490	-	92	91.995	Monodelphis_domestica
ENSCHIG00000011211	SF3B2	71	88.189	ENSMODG00000025020	-	99	87.244	Monodelphis_domestica
ENSCHIG00000011211	SF3B2	80	72.033	ENSMALG00000015137	sf3b2	84	73.324	Monopterus_albus
ENSCHIG00000011211	SF3B2	100	95.212	MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.212	Mus_caroli
ENSCHIG00000011211	SF3B2	100	95.880	ENSMUSG00000024853	Sf3b2	100	95.880	Mus_musculus
ENSCHIG00000011211	SF3B2	100	95.657	MGP_PahariEiJ_G0014036	Sf3b2	100	95.657	Mus_pahari
ENSCHIG00000011211	SF3B2	100	95.768	MGP_SPRETEiJ_G0023453	Sf3b2	100	95.768	Mus_spretus
ENSCHIG00000011211	SF3B2	100	98.771	ENSMPUG00000011349	SF3B2	100	98.771	Mustela_putorius_furo
ENSCHIG00000011211	SF3B2	100	97.768	ENSMLUG00000011136	SF3B2	100	97.768	Myotis_lucifugus
ENSCHIG00000011211	SF3B2	100	95.991	ENSNGAG00000012103	Sf3b2	100	95.991	Nannospalax_galili
ENSCHIG00000011211	SF3B2	84	93.995	ENSNLEG00000006007	SF3B2	100	90.560	Nomascus_leucogenys
ENSCHIG00000011211	SF3B2	86	93.466	ENSMEUG00000000019	SF3B2	91	93.466	Notamacropus_eugenii
ENSCHIG00000011211	SF3B2	100	91.871	ENSODEG00000017764	SF3B2	100	91.871	Octodon_degus
ENSCHIG00000011211	SF3B2	97	67.494	ENSONIG00000013068	sf3b2	87	74.160	Oreochromis_niloticus
ENSCHIG00000011211	SF3B2	87	80.534	ENSOANG00000012482	SF3B2	97	79.608	Ornithorhynchus_anatinus
ENSCHIG00000011211	SF3B2	100	92.205	ENSOCUG00000015722	-	100	92.205	Oryctolagus_cuniculus
ENSCHIG00000011211	SF3B2	62	63.243	ENSOCUG00000024154	-	95	66.406	Oryctolagus_cuniculus
ENSCHIG00000011211	SF3B2	97	66.779	ENSORLG00000008235	sf3b2	85	73.228	Oryzias_latipes
ENSCHIG00000011211	SF3B2	97	66.779	ENSORLG00020005357	sf3b2	88	73.228	Oryzias_latipes_hni
ENSCHIG00000011211	SF3B2	97	66.892	ENSORLG00015022454	sf3b2	82	77.638	Oryzias_latipes_hsok
ENSCHIG00000011211	SF3B2	87	71.410	ENSOMEG00000017480	sf3b2	88	74.244	Oryzias_melastigma
ENSCHIG00000011211	SF3B2	100	91.091	ENSOGAG00000005799	SF3B2	100	91.648	Otolemur_garnettii
ENSCHIG00000011211	SF3B2	100	93.452	ENSOARG00000002125	SF3B2	100	100.000	Ovis_aries
ENSCHIG00000011211	SF3B2	100	97.327	ENSPPAG00000007359	SF3B2	100	97.327	Pan_paniscus
ENSCHIG00000011211	SF3B2	100	98.994	ENSPPRG00000013334	SF3B2	100	98.994	Panthera_pardus
ENSCHIG00000011211	SF3B2	100	98.883	ENSPTIG00000015022	SF3B2	100	98.883	Panthera_tigris_altaica
ENSCHIG00000011211	SF3B2	100	97.327	ENSPTRG00000003912	SF3B2	100	97.327	Pan_troglodytes
ENSCHIG00000011211	SF3B2	100	97.327	ENSPANG00000008593	SF3B2	100	97.327	Papio_anubis
ENSCHIG00000011211	SF3B2	97	68.350	ENSPKIG00000016576	sf3b2	86	79.905	Paramormyrops_kingsleyae
ENSCHIG00000011211	SF3B2	93	82.325	ENSPSIG00000003158	SF3B2	100	87.844	Pelodiscus_sinensis
ENSCHIG00000011211	SF3B2	84	68.816	ENSPMGG00000000819	sf3b2	86	68.947	Periophthalmus_magnuspinnatus
ENSCHIG00000011211	SF3B2	93	80.958	ENSPEMG00000015451	-	91	82.523	Peromyscus_maniculatus_bairdii
ENSCHIG00000011211	SF3B2	100	95.991	ENSPEMG00000015437	Sf3b2	100	95.991	Peromyscus_maniculatus_bairdii
ENSCHIG00000011211	SF3B2	100	89.659	ENSPCIG00000008381	SF3B2	100	89.769	Phascolarctos_cinereus
ENSCHIG00000011211	SF3B2	97	66.337	ENSPFOG00000002552	sf3b2	86	71.392	Poecilia_formosa
ENSCHIG00000011211	SF3B2	97	65.165	ENSPLAG00000001471	sf3b2	86	71.521	Poecilia_latipinna
ENSCHIG00000011211	SF3B2	97	65.017	ENSPMEG00000013180	sf3b2	86	71.355	Poecilia_mexicana
ENSCHIG00000011211	SF3B2	84	71.299	ENSPREG00000002665	sf3b2	86	71.669	Poecilia_reticulata
ENSCHIG00000011211	SF3B2	75	94.807	ENSPPYG00000003034	-	99	94.807	Pongo_abelii
ENSCHIG00000011211	SF3B2	100	96.983	ENSPCAG00000005129	SF3B2	100	96.983	Procavia_capensis
ENSCHIG00000011211	SF3B2	100	97.216	ENSPCOG00000025375	SF3B2	100	97.216	Propithecus_coquereli
ENSCHIG00000011211	SF3B2	60	99.561	ENSPVAG00000005466	-	88	99.561	Pteropus_vampyrus
ENSCHIG00000011211	SF3B2	55	99.299	ENSPVAG00000016975	-	55	99.299	Pteropus_vampyrus
ENSCHIG00000011211	SF3B2	80	74.064	ENSPNYG00000023594	sf3b2	92	74.654	Pundamilia_nyererei
ENSCHIG00000011211	SF3B2	86	72.173	ENSPNAG00000001891	sf3b2	86	73.969	Pygocentrus_nattereri
ENSCHIG00000011211	SF3B2	100	95.768	ENSRNOG00000020412	Sf3b2	100	95.768	Rattus_norvegicus
ENSCHIG00000011211	SF3B2	100	97.216	ENSRBIG00000034065	SF3B2	100	97.216	Rhinopithecus_bieti
ENSCHIG00000011211	SF3B2	100	97.216	ENSRROG00000034496	SF3B2	100	97.216	Rhinopithecus_roxellana
ENSCHIG00000011211	SF3B2	100	92.409	ENSSBOG00000026337	SF3B2	87	94.942	Saimiri_boliviensis_boliviensis
ENSCHIG00000011211	SF3B2	96	68.614	ENSSHAG00000018043	-	89	72.692	Sarcophilus_harrisii
ENSCHIG00000011211	SF3B2	100	84.462	ENSSHAG00000010933	-	100	84.573	Sarcophilus_harrisii
ENSCHIG00000011211	SF3B2	97	68.066	ENSSFOG00015021125	sf3b2	86	75.032	Scleropages_formosus
ENSCHIG00000011211	SF3B2	84	73.982	ENSSMAG00000004079	sf3b2	88	74.870	Scophthalmus_maximus
ENSCHIG00000011211	SF3B2	59	88.425	ENSSDUG00000008499	sf3b2	85	71.891	Seriola_dumerili
ENSCHIG00000011211	SF3B2	59	88.425	ENSSLDG00000006838	sf3b2	86	75.225	Seriola_lalandi_dorsalis
ENSCHIG00000011211	SF3B2	68	99.206	ENSSARG00000003707	-	68	99.206	Sorex_araneus
ENSCHIG00000011211	SF3B2	100	79.889	ENSSPUG00000009198	SF3B2	85	83.858	Sphenodon_punctatus
ENSCHIG00000011211	SF3B2	97	65.326	ENSSPAG00000004406	sf3b2	86	74.809	Stegastes_partitus
ENSCHIG00000011211	SF3B2	100	98.324	ENSSSCG00000012957	SF3B2	100	98.324	Sus_scrofa
ENSCHIG00000011211	SF3B2	87	63.718	ENSTRUG00000007611	sf3b2	88	71.919	Takifugu_rubripes
ENSCHIG00000011211	SF3B2	86	70.513	ENSTNIG00000007441	sf3b2	85	70.929	Tetraodon_nigroviridis
ENSCHIG00000011211	SF3B2	89	95.349	ENSTBEG00000004258	SF3B2	82	99.286	Tupaia_belangeri
ENSCHIG00000011211	SF3B2	100	98.771	ENSTTRG00000014339	SF3B2	100	98.771	Tursiops_truncatus
ENSCHIG00000011211	SF3B2	100	96.987	ENSUAMG00000020754	SF3B2	99	98.407	Ursus_americanus
ENSCHIG00000011211	SF3B2	100	98.994	ENSUMAG00000010994	SF3B2	100	98.994	Ursus_maritimus
ENSCHIG00000011211	SF3B2	67	99.153	ENSVPAG00000008695	SF3B2	72	99.153	Vicugna_pacos
ENSCHIG00000011211	SF3B2	100	98.771	ENSVVUG00000027029	SF3B2	100	98.771	Vulpes_vulpes
ENSCHIG00000011211	SF3B2	87	69.823	ENSXETG00000008422	sf3b2	87	78.102	Xenopus_tropicalis
ENSCHIG00000011211	SF3B2	70	78.254	ENSXCOG00000008943	sf3b2	84	77.971	Xiphophorus_couchianus
ENSCHIG00000011211	SF3B2	97	65.022	ENSXMAG00000008467	sf3b2	86	70.951	Xiphophorus_maculatus