EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000011437 (Gene tree)
Gene ID: 102177216
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 65622 bases
Position: chr28:38084967-38150588
Accession: 102177216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000008195	SpoU_methylase	PF00588.19	1.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000015952	TARBP1-201	4842	XM_013975535	ENSCHIP00000008195	1613 (aa)	XP_013830989	UPI000D197EBE

Gene Model

Click here to download ENSCHIG00000011437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000011437's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000011437	TARBP1	99	83.929	ENSG00000059588	TARBP1	99	83.190	Homo_sapiens
ENSCHIG00000011437	TARBP1	99	41.717	ENSAPOG00000016419	si:dkey-85a20.4	88	44.102	Acanthochromis_polyacanthus
ENSCHIG00000011437	TARBP1	84	84.846	ENSAMEG00000003359	TARBP1	99	84.846	Ailuropoda_melanoleuca
ENSCHIG00000011437	TARBP1	99	41.806	ENSATEG00000020266	si:dkey-85a20.4	85	44.874	Anabas_testudineus
ENSCHIG00000011437	TARBP1	83	66.251	ENSAPLG00000007666	TARBP1	99	66.947	Anas_platyrhynchos
ENSCHIG00000011437	TARBP1	98	58.184	ENSACAG00000001142	TARBP1	98	57.512	Anolis_carolinensis
ENSCHIG00000011437	TARBP1	92	86.747	ENSANAG00000022031	TARBP1	99	76.293	Aotus_nancymaae
ENSCHIG00000011437	TARBP1	99	95.978	ENSBTAG00000004517	TARBP1	99	95.978	Bos_taurus
ENSCHIG00000011437	TARBP1	99	82.451	ENSCJAG00000018155	TARBP1	99	81.835	Callithrix_jacchus
ENSCHIG00000011437	TARBP1	88	85.185	ENSCAFG00000011533	TARBP1	99	85.340	Canis_familiaris
ENSCHIG00000011437	TARBP1	99	83.456	ENSCAFG00020027141	TARBP1	99	83.640	Canis_lupus_dingo
ENSCHIG00000011437	TARBP1	80	84.174	ENSTSYG00000010382	TARBP1	97	83.869	Carlito_syrichta
ENSCHIG00000011437	TARBP1	78	67.612	ENSCAPG00000010831	TARBP1	99	67.559	Cavia_aperea
ENSCHIG00000011437	TARBP1	99	74.056	ENSCPOG00000013995	TARBP1	99	74.118	Cavia_porcellus
ENSCHIG00000011437	TARBP1	99	83.128	ENSCCAG00000037278	TARBP1	99	82.512	Cebus_capucinus
ENSCHIG00000011437	TARBP1	99	83.436	ENSCATG00000011754	TARBP1	99	83.005	Cercocebus_atys
ENSCHIG00000011437	TARBP1	83	86.111	ENSCLAG00000003655	TARBP1	99	86.111	Chinchilla_lanigera
ENSCHIG00000011437	TARBP1	79	84.399	ENSCSAG00000010100	TARBP1	99	84.399	Chlorocebus_sabaeus
ENSCHIG00000011437	TARBP1	94	65.127	ENSCPBG00000005587	TARBP1	98	64.606	Chrysemys_picta_bellii
ENSCHIG00000011437	TARBP1	83	84.672	ENSCANG00000034343	TARBP1	99	84.672	Colobus_angolensis_palliatus
ENSCHIG00000011437	TARBP1	99	72.397	ENSCGRG00001016690	Tarbp1	99	71.860	Cricetulus_griseus_chok1gshd
ENSCHIG00000011437	TARBP1	90	73.850	ENSCGRG00000016893	Tarbp1	98	74.100	Cricetulus_griseus_crigri
ENSCHIG00000011437	TARBP1	99	38.940	ENSCSEG00000005255	si:dkey-85a20.4	79	48.103	Cynoglossus_semilaevis
ENSCHIG00000011437	TARBP1	99	41.860	ENSDARG00000079055	si:dkey-85a20.4	99	52.641	Danio_rerio
ENSCHIG00000011437	TARBP1	99	80.921	ENSDNOG00000008637	TARBP1	99	81.318	Dasypus_novemcinctus
ENSCHIG00000011437	TARBP1	80	72.321	ENSDORG00000007984	Tarbp1	100	72.475	Dipodomys_ordii
ENSCHIG00000011437	TARBP1	99	86.847	ENSEASG00005000252	TARBP1	99	86.171	Equus_asinus_asinus
ENSCHIG00000011437	TARBP1	99	87.093	ENSECAG00000023673	TARBP1	99	87.211	Equus_caballus
ENSCHIG00000011437	TARBP1	99	41.205	ENSELUG00000012193	si:dkey-85a20.4	86	44.199	Esox_lucius
ENSCHIG00000011437	TARBP1	99	82.526	ENSFCAG00000014183	TARBP1	99	82.103	Felis_catus
ENSCHIG00000011437	TARBP1	80	66.973	ENSFALG00000013565	TARBP1	99	66.972	Ficedula_albicollis
ENSCHIG00000011437	TARBP1	79	74.866	ENSFDAG00000001308	TARBP1	99	74.713	Fukomys_damarensis
ENSCHIG00000011437	TARBP1	98	50.513	ENSFHEG00000007565	si:dkey-85a20.4	85	50.513	Fundulus_heteroclitus
ENSCHIG00000011437	TARBP1	83	43.655	ENSGMOG00000004549	si:dkey-85a20.4	98	43.655	Gadus_morhua
ENSCHIG00000011437	TARBP1	99	57.345	ENSGALG00000011000	TARBP1	99	57.415	Gallus_gallus
ENSCHIG00000011437	TARBP1	99	41.325	ENSGAFG00000007387	si:dkey-85a20.4	85	44.539	Gambusia_affinis
ENSCHIG00000011437	TARBP1	85	45.326	ENSGACG00000005865	si:dkey-85a20.4	99	45.377	Gasterosteus_aculeatus
ENSCHIG00000011437	TARBP1	99	65.788	ENSGAGG00000012102	TARBP1	99	65.665	Gopherus_agassizii
ENSCHIG00000011437	TARBP1	84	82.203	ENSGGOG00000022879	TARBP1	99	82.203	Gorilla_gorilla
ENSCHIG00000011437	TARBP1	94	43.113	ENSHBUG00000008877	si:dkey-85a20.4	88	44.612	Haplochromis_burtoni
ENSCHIG00000011437	TARBP1	99	76.314	ENSHGLG00000011592	TARBP1	99	75.819	Heterocephalus_glaber_female
ENSCHIG00000011437	TARBP1	93	77.489	ENSHGLG00100015169	TARBP1	99	77.201	Heterocephalus_glaber_male
ENSCHIG00000011437	TARBP1	99	39.771	ENSIPUG00000005249	si:dkey-85a20.4	85	42.420	Ictalurus_punctatus
ENSCHIG00000011437	TARBP1	88	75.353	ENSSTOG00000032291	TARBP1	99	76.744	Ictidomys_tridecemlineatus
ENSCHIG00000011437	TARBP1	91	71.387	ENSJJAG00000017840	Tarbp1	99	71.232	Jaculus_jaculus
ENSCHIG00000011437	TARBP1	80	46.377	ENSKMAG00000017546	si:dkey-85a20.4	75	46.846	Kryptolebias_marmoratus
ENSCHIG00000011437	TARBP1	65	49.865	ENSLBEG00000012132	si:dkey-85a20.4	77	49.865	Labrus_bergylta
ENSCHIG00000011437	TARBP1	99	50.995	ENSLACG00000004337	TARBP1	99	50.512	Latimeria_chalumnae
ENSCHIG00000011437	TARBP1	99	46.102	ENSLOCG00000016214	si:dkey-85a20.4	85	49.857	Lepisosteus_oculatus
ENSCHIG00000011437	TARBP1	96	81.033	ENSLAFG00000011394	TARBP1	99	81.203	Loxodonta_africana
ENSCHIG00000011437	TARBP1	99	81.061	ENSMFAG00000041068	TARBP1	99	80.321	Macaca_fascicularis
ENSCHIG00000011437	TARBP1	99	81.377	ENSMMUG00000021703	TARBP1	99	80.639	Macaca_mulatta
ENSCHIG00000011437	TARBP1	99	83.682	ENSMNEG00000045002	TARBP1	99	82.943	Macaca_nemestrina
ENSCHIG00000011437	TARBP1	83	85.048	ENSMLEG00000044182	TARBP1	99	85.048	Mandrillus_leucophaeus
ENSCHIG00000011437	TARBP1	94	43.495	ENSMAMG00000021760	si:dkey-85a20.4	89	44.589	Mastacembelus_armatus
ENSCHIG00000011437	TARBP1	94	43.049	ENSMZEG00005005751	si:dkey-85a20.4	85	45.364	Maylandia_zebra
ENSCHIG00000011437	TARBP1	99	71.860	ENSMAUG00000020968	Tarbp1	99	71.446	Mesocricetus_auratus
ENSCHIG00000011437	TARBP1	99	75.123	ENSMICG00000015280	TARBP1	99	74.430	Microcebus_murinus
ENSCHIG00000011437	TARBP1	99	71.393	ENSMOCG00000004128	Tarbp1	99	71.147	Microtus_ochrogaster
ENSCHIG00000011437	TARBP1	99	40.984	ENSMMOG00000007795	si:dkey-85a20.4	88	43.260	Mola_mola
ENSCHIG00000011437	TARBP1	99	71.567	ENSMODG00000008504	TARBP1	99	70.937	Monodelphis_domestica
ENSCHIG00000011437	TARBP1	99	41.718	ENSMALG00000002916	si:dkey-85a20.4	88	44.097	Monopterus_albus
ENSCHIG00000011437	TARBP1	99	71.270	MGP_CAROLIEiJ_G0031729	Tarbp1	99	70.962	Mus_caroli
ENSCHIG00000011437	TARBP1	99	71.208	ENSMUSG00000090290	Tarbp1	99	70.962	Mus_musculus
ENSCHIG00000011437	TARBP1	99	71.358	MGP_PahariEiJ_G0023326	Tarbp1	99	71.049	Mus_pahari
ENSCHIG00000011437	TARBP1	100	71.121	MGP_SPRETEiJ_G0032846	Tarbp1	99	70.874	Mus_spretus
ENSCHIG00000011437	TARBP1	76	83.736	ENSMPUG00000002802	TARBP1	99	83.655	Mustela_putorius_furo
ENSCHIG00000011437	TARBP1	84	74.964	ENSMLUG00000002414	TARBP1	100	75.236	Myotis_lucifugus
ENSCHIG00000011437	TARBP1	99	83.682	ENSNLEG00000002518	TARBP1	99	83.005	Nomascus_leucogenys
ENSCHIG00000011437	TARBP1	67	77.350	ENSMEUG00000011370	-	67	77.350	Notamacropus_eugenii
ENSCHIG00000011437	TARBP1	71	84.375	ENSOPRG00000013822	TARBP1	71	84.375	Ochotona_princeps
ENSCHIG00000011437	TARBP1	99	71.367	ENSODEG00000005238	TARBP1	99	71.923	Octodon_degus
ENSCHIG00000011437	TARBP1	85	45.455	ENSONIG00000009789	si:dkey-85a20.4	99	45.455	Oreochromis_niloticus
ENSCHIG00000011437	TARBP1	99	82.244	ENSOCUG00000017418	TARBP1	99	81.813	Oryctolagus_cuniculus
ENSCHIG00000011437	TARBP1	100	40.012	ENSORLG00020019264	si:dkey-85a20.4	88	42.350	Oryzias_latipes_hni
ENSCHIG00000011437	TARBP1	100	40.012	ENSORLG00015003276	si:dkey-85a20.4	88	42.321	Oryzias_latipes_hsok
ENSCHIG00000011437	TARBP1	99	80.148	ENSOGAG00000002379	TARBP1	99	79.346	Otolemur_garnettii
ENSCHIG00000011437	TARBP1	97	98.269	ENSOARG00000003434	TARBP1	100	98.269	Ovis_aries
ENSCHIG00000011437	TARBP1	84	85.221	ENSPPAG00000028097	TARBP1	99	85.221	Pan_paniscus
ENSCHIG00000011437	TARBP1	95	88.024	ENSPPRG00000013561	TARBP1	99	85.030	Panthera_pardus
ENSCHIG00000011437	TARBP1	82	85.587	ENSPTIG00000009281	TARBP1	99	85.757	Panthera_tigris_altaica
ENSCHIG00000011437	TARBP1	99	83.948	ENSPTRG00000002124	TARBP1	99	83.149	Pan_troglodytes
ENSCHIG00000011437	TARBP1	99	83.744	ENSPANG00000021933	TARBP1	99	83.005	Papio_anubis
ENSCHIG00000011437	TARBP1	99	43.345	ENSPKIG00000016716	si:dkey-85a20.4	88	46.007	Paramormyrops_kingsleyae
ENSCHIG00000011437	TARBP1	79	69.673	ENSPSIG00000010699	TARBP1	99	69.440	Pelodiscus_sinensis
ENSCHIG00000011437	TARBP1	96	73.750	ENSPEMG00000006888	Tarbp1	99	73.750	Peromyscus_maniculatus_bairdii
ENSCHIG00000011437	TARBP1	91	86.634	ENSPCIG00000029710	TARBP1	99	86.634	Phascolarctos_cinereus
ENSCHIG00000011437	TARBP1	85	44.933	ENSPFOG00000013020	si:dkey-85a20.4	99	44.933	Poecilia_formosa
ENSCHIG00000011437	TARBP1	99	41.647	ENSPLAG00000006044	si:dkey-85a20.4	85	45.035	Poecilia_latipinna
ENSCHIG00000011437	TARBP1	99	41.767	ENSPMEG00000017857	si:dkey-85a20.4	87	44.276	Poecilia_mexicana
ENSCHIG00000011437	TARBP1	93	43.282	ENSPREG00000022753	si:dkey-85a20.4	85	45.011	Poecilia_reticulata
ENSCHIG00000011437	TARBP1	91	84.344	ENSPPYG00000000102	TARBP1	99	84.344	Pongo_abelii
ENSCHIG00000011437	TARBP1	85	90.000	ENSPCAG00000004808	TARBP1	85	90.000	Procavia_capensis
ENSCHIG00000011437	TARBP1	99	81.762	ENSPCOG00000005666	TARBP1	99	81.269	Propithecus_coquereli
ENSCHIG00000011437	TARBP1	99	68.819	ENSPVAG00000014798	TARBP1	99	68.389	Pteropus_vampyrus
ENSCHIG00000011437	TARBP1	94	41.828	ENSPNYG00000019135	si:dkey-85a20.4	85	44.158	Pundamilia_nyererei
ENSCHIG00000011437	TARBP1	99	67.734	ENSRNOG00000053574	Tarbp1	99	67.138	Rattus_norvegicus
ENSCHIG00000011437	TARBP1	97	78.086	ENSRBIG00000043362	TARBP1	99	87.500	Rhinopithecus_bieti
ENSCHIG00000011437	TARBP1	99	79.741	ENSRROG00000029527	TARBP1	99	79.741	Rhinopithecus_roxellana
ENSCHIG00000011437	TARBP1	87	84.655	ENSSBOG00000034503	TARBP1	99	86.047	Saimiri_boliviensis_boliviensis
ENSCHIG00000011437	TARBP1	83	74.742	ENSSHAG00000000013	TARBP1	99	74.742	Sarcophilus_harrisii
ENSCHIG00000011437	TARBP1	84	45.507	ENSSFOG00015002660	si:dkey-85a20.4	96	46.611	Scleropages_formosus
ENSCHIG00000011437	TARBP1	91	43.832	ENSSMAG00000007081	si:dkey-85a20.4	88	44.707	Scophthalmus_maximus
ENSCHIG00000011437	TARBP1	91	42.933	ENSSDUG00000023566	si:dkey-85a20.4	88	43.689	Seriola_dumerili
ENSCHIG00000011437	TARBP1	91	44.378	ENSSLDG00000020200	si:dkey-85a20.4	89	45.007	Seriola_lalandi_dorsalis
ENSCHIG00000011437	TARBP1	89	86.512	ENSSARG00000012207	TARBP1	89	86.512	Sorex_araneus
ENSCHIG00000011437	TARBP1	99	63.248	ENSSPUG00000015364	TARBP1	99	63.242	Sphenodon_punctatus
ENSCHIG00000011437	TARBP1	99	41.897	ENSSPAG00000007213	si:dkey-85a20.4	88	44.150	Stegastes_partitus
ENSCHIG00000011437	TARBP1	99	87.292	ENSSSCG00000010160	TARBP1	99	88.330	Sus_scrofa
ENSCHIG00000011437	TARBP1	80	67.328	ENSTGUG00000010214	TARBP1	100	67.328	Taeniopygia_guttata
ENSCHIG00000011437	TARBP1	94	39.694	ENSTNIG00000016586	si:dkey-85a20.4	99	44.574	Tetraodon_nigroviridis
ENSCHIG00000011437	TARBP1	91	91.379	ENSTTRG00000008707	TARBP1	96	87.574	Tursiops_truncatus
ENSCHIG00000011437	TARBP1	81	84.755	ENSUMAG00000006730	TARBP1	99	84.755	Ursus_maritimus
ENSCHIG00000011437	TARBP1	72	90.099	ENSVPAG00000007665	TARBP1	80	90.099	Vicugna_pacos
ENSCHIG00000011437	TARBP1	85	85.725	ENSVVUG00000007460	TARBP1	97	85.652	Vulpes_vulpes
ENSCHIG00000011437	TARBP1	83	55.190	ENSXETG00000016224	tarbp1	99	55.117	Xenopus_tropicalis
ENSCHIG00000011437	TARBP1	77	48.834	ENSXCOG00000011779	si:dkey-85a20.4	93	48.971	Xiphophorus_couchianus
ENSCHIG00000011437	TARBP1	64	43.137	ENSXMAG00000009600	si:dkey-85a20.4	100	42.804	Xiphophorus_maculatus