EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000012143 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 2127 bases
Position: chr4:119700884-119703010
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000009198	RRM_1	PF00076.22	4.2e-33	1	2
ENSCHIP00000009198	RRM_1	PF00076.22	4.2e-33	2	2
ENSCHIP00000009189	RRM_1	PF00076.22	7.9e-33	1	2
ENSCHIP00000009189	RRM_1	PF00076.22	7.9e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000016960	-	1971	-	ENSCHIP00000009189	656 (aa)	-	UPI000D18F9A7
ENSCHIT00000016969	-	1728	-	ENSCHIP00000009198	575 (aa)	-	UPI000D1921CB

Gene Model

Click here to download ENSCHIG00000012143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000012143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000012143	-	53	57.430	ENSCHIG00000003401	-	89	61.504
ENSCHIG00000012143	-	92	77.876	ENSCHIG00000021052	-	87	77.876
ENSCHIG00000012143	-	86	78.654	ENSCHIG00000010894	-	69	82.932
ENSCHIG00000012143	-	100	74.571	ENSCHIG00000026149	-	100	66.473
ENSCHIG00000012143	-	92	58.372	ENSCHIG00000012665	-	92	53.409

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000012143	-	84	78.005	ENSG00000115053	NCL	98	71.636	Homo_sapiens
ENSCHIG00000012143	-	60	82.586	ENSAMEG00000016289	NCL	92	63.623	Ailuropoda_melanoleuca
ENSCHIG00000012143	-	98	57.756	ENSANAG00000024378	-	98	58.746	Aotus_nancymaae
ENSCHIG00000012143	-	60	81.003	ENSANAG00000035814	-	92	63.247	Aotus_nancymaae
ENSCHIG00000012143	-	100	72.789	ENSBTAG00000050728	-	100	72.789	Bos_taurus
ENSCHIG00000012143	-	98	72.441	ENSBTAG00000051320	-	92	71.863	Bos_taurus
ENSCHIG00000012143	-	91	72.358	ENSBTAG00000026909	-	86	74.477	Bos_taurus
ENSCHIG00000012143	-	94	77.151	ENSBTAG00000016174	NCL	90	79.516	Bos_taurus
ENSCHIG00000012143	-	60	81.003	ENSCJAG00000013538	NCL	92	63.553	Callithrix_jacchus
ENSCHIG00000012143	-	92	73.025	ENSCAFG00000011037	NCL	92	65.344	Canis_familiaris
ENSCHIG00000012143	-	85	73.301	ENSCAFG00020023145	NCL	81	70.324	Canis_lupus_dingo
ENSCHIG00000012143	-	91	65.523	ENSTSYG00000036886	-	90	64.134	Carlito_syrichta
ENSCHIG00000012143	-	92	71.644	ENSTSYG00000004355	-	92	62.290	Carlito_syrichta
ENSCHIG00000012143	-	92	69.391	ENSTSYG00000029779	-	98	67.298	Carlito_syrichta
ENSCHIG00000012143	-	60	73.615	ENSCAPG00000009405	NCL	91	58.269	Cavia_aperea
ENSCHIG00000012143	-	60	78.100	ENSCPOG00000001034	NCL	92	61.256	Cavia_porcellus
ENSCHIG00000012143	-	60	81.003	ENSCCAG00000021040	-	92	63.328	Cebus_capucinus
ENSCHIG00000012143	-	86	69.347	ENSCCAG00000000551	-	78	69.652	Cebus_capucinus
ENSCHIG00000012143	-	92	71.970	ENSCATG00000037033	NCL	92	63.594	Cercocebus_atys
ENSCHIG00000012143	-	92	68.079	ENSCLAG00000013080	NCL	92	61.738	Chinchilla_lanigera
ENSCHIG00000012143	-	61	81.316	ENSCSAG00000006660	NCL	95	79.043	Chlorocebus_sabaeus
ENSCHIG00000012143	-	70	68.445	ENSCHOG00000012860	NCL	89	68.650	Choloepus_hoffmanni
ENSCHIG00000012143	-	51	82.372	ENSCANG00000036756	NCL	88	80.435	Colobus_angolensis_palliatus
ENSCHIG00000012143	-	93	60.334	ENSCGRG00001022350	-	96	65.479	Cricetulus_griseus_chok1gshd
ENSCHIG00000012143	-	92	69.055	ENSCGRG00001024315	-	91	59.969	Cricetulus_griseus_chok1gshd
ENSCHIG00000012143	-	93	56.992	ENSCGRG00000000507	-	93	55.065	Cricetulus_griseus_crigri
ENSCHIG00000012143	-	86	68.013	ENSCGRG00000017894	-	89	60.194	Cricetulus_griseus_crigri
ENSCHIG00000012143	-	92	66.871	ENSDNOG00000046347	-	91	57.143	Dasypus_novemcinctus
ENSCHIG00000012143	-	87	80.577	ENSDNOG00000010783	-	92	62.730	Dasypus_novemcinctus
ENSCHIG00000012143	-	51	63.611	ENSDORG00000023596	-	62	61.860	Dipodomys_ordii
ENSCHIG00000012143	-	74	70.185	ENSDORG00000012513	-	91	58.411	Dipodomys_ordii
ENSCHIG00000012143	-	60	76.393	ENSETEG00000014756	-	86	76.517	Echinops_telfairi
ENSCHIG00000012143	-	90	48.128	ENSETEG00000008139	-	99	47.359	Echinops_telfairi
ENSCHIG00000012143	-	69	55.324	ENSETEG00000008553	-	89	55.125	Echinops_telfairi
ENSCHIG00000012143	-	61	77.105	ENSETEG00000018937	-	76	74.492	Echinops_telfairi
ENSCHIG00000012143	-	86	73.496	ENSEASG00005008488	NCL	85	77.727	Equus_asinus_asinus
ENSCHIG00000012143	-	92	73.636	ENSECAG00000021868	NCL	92	63.429	Equus_caballus
ENSCHIG00000012143	-	86	69.637	ENSEEUG00000005913	NCL	65	75.785	Erinaceus_europaeus
ENSCHIG00000012143	-	92	74.622	ENSFCAG00000027622	NCL	92	64.177	Felis_catus
ENSCHIG00000012143	-	91	69.254	ENSFDAG00000014291	NCL	92	61.385	Fukomys_damarensis
ENSCHIG00000012143	-	84	78.005	ENSGGOG00000004300	NCL	91	76.549	Gorilla_gorilla
ENSCHIG00000012143	-	60	79.683	ENSHGLG00000002031	-	92	63.093	Heterocephalus_glaber_female
ENSCHIG00000012143	-	60	74.533	ENSHGLG00000011069	-	100	60.615	Heterocephalus_glaber_female
ENSCHIG00000012143	-	60	79.420	ENSHGLG00100014537	-	92	62.558	Heterocephalus_glaber_male
ENSCHIG00000012143	-	69	73.536	ENSHGLG00100000745	-	100	62.016	Heterocephalus_glaber_male
ENSCHIG00000012143	-	75	68.930	ENSJJAG00000016165	Ncl	91	57.862	Jaculus_jaculus
ENSCHIG00000012143	-	91	80.952	ENSLAFG00000013061	NCL	84	71.533	Loxodonta_africana
ENSCHIG00000012143	-	92	72.012	ENSMFAG00000040385	NCL	92	63.497	Macaca_fascicularis
ENSCHIG00000012143	-	92	72.012	ENSMMUG00000018094	NCL	92	63.497	Macaca_mulatta
ENSCHIG00000012143	-	92	66.769	ENSMNEG00000023839	NCL	91	65.764	Macaca_nemestrina
ENSCHIG00000012143	-	92	72.121	ENSMLEG00000028935	NCL	92	63.594	Mandrillus_leucophaeus
ENSCHIG00000012143	-	92	70.455	ENSMICG00000002538	-	92	62.730	Microcebus_murinus
ENSCHIG00000012143	-	93	58.173	ENSMICG00000029975	-	97	62.752	Microcebus_murinus
ENSCHIG00000012143	-	92	67.278	MGP_CAROLIEiJ_G0014362	Ncl	62	73.318	Mus_caroli
ENSCHIG00000012143	-	92	67.328	ENSMUSG00000026234	Ncl	92	58.742	Mus_musculus
ENSCHIG00000012143	-	92	67.431	MGP_PahariEiJ_G0027599	Ncl	75	73.094	Mus_pahari
ENSCHIG00000012143	-	92	67.431	MGP_SPRETEiJ_G0015164	Ncl	89	73.767	Mus_spretus
ENSCHIG00000012143	-	91	78.959	ENSMLUG00000014547	NCL	92	73.364	Myotis_lucifugus
ENSCHIG00000012143	-	85	74.713	ENSNGAG00000002454	-	91	59.665	Nannospalax_galili
ENSCHIG00000012143	-	72	67.123	ENSNGAG00000006188	-	73	67.945	Nannospalax_galili
ENSCHIG00000012143	-	70	70.343	ENSNLEG00000014107	-	61	71.154	Nomascus_leucogenys
ENSCHIG00000012143	-	100	56.042	ENSODEG00000002441	-	100	56.667	Octodon_degus
ENSCHIG00000012143	-	74	58.790	ENSODEG00000007803	-	92	50.000	Octodon_degus
ENSCHIG00000012143	-	75	75.597	ENSODEG00000003281	-	91	59.601	Octodon_degus
ENSCHIG00000012143	-	80	75.332	ENSODEG00000002748	-	91	62.562	Octodon_degus
ENSCHIG00000012143	-	92	61.364	ENSOCUG00000004312	NCL	84	73.333	Oryctolagus_cuniculus
ENSCHIG00000012143	-	73	73.879	ENSOGAG00000027852	NCL	91	62.587	Otolemur_garnettii
ENSCHIG00000012143	-	76	77.273	ENSOARG00000013270	-	100	77.273	Ovis_aries
ENSCHIG00000012143	-	70	71.363	ENSOARG00000004072	-	93	64.286	Ovis_aries
ENSCHIG00000012143	-	91	77.605	ENSOARG00000020709	-	92	73.406	Ovis_aries
ENSCHIG00000012143	-	86	73.869	ENSOARG00000013710	-	97	70.766	Ovis_aries
ENSCHIG00000012143	-	84	78.231	ENSPPAG00000011619	NCL	91	72.653	Pan_paniscus
ENSCHIG00000012143	-	92	73.979	ENSPPRG00000012603	NCL	92	64.122	Panthera_pardus
ENSCHIG00000012143	-	91	73.740	ENSPTIG00000010393	NCL	91	63.790	Panthera_tigris_altaica
ENSCHIG00000012143	-	84	77.602	ENSPTRG00000013025	NCL	91	72.470	Pan_troglodytes
ENSCHIG00000012143	-	92	72.012	ENSPANG00000010292	NCL	92	63.497	Papio_anubis
ENSCHIG00000012143	-	84	69.213	ENSPPYG00000013265	NCL	92	65.152	Pongo_abelii
ENSCHIG00000012143	-	92	72.205	ENSPCOG00000003051	-	91	63.748	Propithecus_coquereli
ENSCHIG00000012143	-	88	73.963	ENSPCOG00000004160	-	87	74.868	Propithecus_coquereli
ENSCHIG00000012143	-	92	74.316	ENSPVAG00000000297	NCL	92	64.670	Pteropus_vampyrus
ENSCHIG00000012143	-	92	67.023	ENSRNOG00000018273	Ncl	89	74.000	Rattus_norvegicus
ENSCHIG00000012143	-	92	69.419	ENSRBIG00000037525	-	91	63.622	Rhinopithecus_bieti
ENSCHIG00000012143	-	65	79.585	ENSRBIG00000035396	-	88	79.655	Rhinopithecus_bieti
ENSCHIG00000012143	-	99	67.402	ENSRROG00000036103	-	99	59.837	Rhinopithecus_roxellana
ENSCHIG00000012143	-	92	71.558	ENSRROG00000028756	-	90	76.549	Rhinopithecus_roxellana
ENSCHIG00000012143	-	60	80.739	ENSSBOG00000029193	-	92	62.691	Saimiri_boliviensis_boliviensis
ENSCHIG00000012143	-	53	59.716	ENSSBOG00000023094	-	87	56.618	Saimiri_boliviensis_boliviensis
ENSCHIG00000012143	-	92	65.055	ENSSBOG00000027549	-	84	77.657	Saimiri_boliviensis_boliviensis
ENSCHIG00000012143	-	92	73.163	ENSSSCG00000016275	NCL	92	74.208	Sus_scrofa
ENSCHIG00000012143	-	60	70.976	ENSTBEG00000001546	-	85	65.074	Tupaia_belangeri
ENSCHIG00000012143	-	78	67.000	ENSTBEG00000002469	-	73	65.163	Tupaia_belangeri
ENSCHIG00000012143	-	92	72.492	ENSTTRG00000009094	NCL	91	64.099	Tursiops_truncatus
ENSCHIG00000012143	-	67	82.632	ENSUAMG00000005639	NCL	88	80.813	Ursus_americanus
ENSCHIG00000012143	-	60	82.850	ENSUMAG00000015789	NCL	92	64.264	Ursus_maritimus
ENSCHIG00000012143	-	72	68.986	ENSVPAG00000001796	NCL	72	68.986	Vicugna_pacos
ENSCHIG00000012143	-	92	71.493	ENSVVUG00000025564	NCL	91	62.597	Vulpes_vulpes