EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCHIG00000012184 (Gene tree)
Gene ID
102172629
Gene Symbol
PABPN1
Alias
OPMD|PAB2|PABP2
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Capra_hircus
Status
putative
Strand
Plus strand
Length
3925 bases
Position
chr10:79848484-79852408
Accession
102172629
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCHIP00000009252RRM_1PF00076.229.1e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCHIT00000017023PABPN1-201921XM_013966873ENSCHIP00000009252306 (aa)XP_013822327UPI0005FB9BC2
Gene Model
Click here to download ENSCHIG00000012184's gene model file
Pathways
Pathway IDPathway NameSource
chx03015mRNA surveillance pathwayKEGG
chx05164Influenza AKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000012184's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCHIG00000012184PABPN17040.909ENSCHIG00000013987PABPN1L5146.875
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCHIG00000012184PABPN162100.000ENSG00000258643BCL2L2-PABPN157100.000Homo_sapiens
ENSCHIG00000012184PABPN110099.673ENSG00000100836PABPN1100100.000Homo_sapiens
ENSCHIG00000012184PABPN18670.455ENSAPOG00000016425pabpn18682.039Acanthochromis_polyacanthus
ENSCHIG00000012184PABPN162100.000ENSAMEG00000007048BCL2L2-PABPN1100100.000Ailuropoda_melanoleuca
ENSCHIG00000012184PABPN18467.300ENSACIG00000021744pabpn19482.143Amphilophus_citrinellus
ENSCHIG00000012184PABPN18670.455ENSAOCG00000015805pabpn18682.039Amphiprion_ocellaris
ENSCHIG00000012184PABPN18670.455ENSAPEG00000009623pabpn18682.039Amphiprion_percula
ENSCHIG00000012184PABPN18670.833ENSATEG00000020531pabpn18682.524Anabas_testudineus
ENSCHIG00000012184PABPN16688.670ENSACAG00000006185-7487.560Anolis_carolinensis
ENSCHIG00000012184PABPN110090.850ENSANAG00000024513-10090.850Aotus_nancymaae
ENSCHIG00000012184PABPN18467.045ENSACLG00000016374pabpn16680.905Astatotilapia_calliptera
ENSCHIG00000012184PABPN18671.591ENSAMXG00000000452pabpn19483.929Astyanax_mexicanus
ENSCHIG00000012184PABPN110099.673ENSBTAG00000006884PABPN110099.673Bos_taurus
ENSCHIG00000012184PABPN19275.532ENSBTAG00000050594-8986.792Bos_taurus
ENSCHIG00000012184PABPN19276.868ENSBTAG00000053753-7198.429Bos_taurus
ENSCHIG00000012184PABPN110099.673ENSCJAG00000007960-10099.673Callithrix_jacchus
ENSCHIG00000012184PABPN15898.315ENSCJAG00000004407-8998.315Callithrix_jacchus
ENSCHIG00000012184PABPN110096.732ENSCAFG00000011482PABPN110096.732Canis_familiaris
ENSCHIG00000012184PABPN110099.673ENSCAFG00020007298-10099.673Canis_lupus_dingo
ENSCHIG00000012184PABPN110099.673ENSCAFG00020006651-10099.673Canis_lupus_dingo
ENSCHIG00000012184PABPN162100.000ENSTSYG00000033996BCL2L2-PABPN1100100.000Carlito_syrichta
ENSCHIG00000012184PABPN110098.039ENSCPOG00000025574PABPN110098.039Cavia_porcellus
ENSCHIG00000012184PABPN110099.673ENSCCAG00000033954BCL2L2-PABPN110099.673Cebus_capucinus
ENSCHIG00000012184PABPN110099.673ENSCATG00000038536BCL2L2-PABPN110099.673Cercocebus_atys
ENSCHIG00000012184PABPN16780.000ENSCLAG00000012423PABPN16280.000Chinchilla_lanigera
ENSCHIG00000012184PABPN110098.039ENSCSAG00000016036PABPN110098.039Chlorocebus_sabaeus
ENSCHIG00000012184PABPN16788.293ENSCHOG00000004798BCL2L2-PABPN18888.293Choloepus_hoffmanni
ENSCHIG00000012184PABPN15592.814ENSCPBG00000026060-9492.814Chrysemys_picta_bellii
ENSCHIG00000012184PABPN16562.687ENSCING00000012468-8465.174Ciona_intestinalis
ENSCHIG00000012184PABPN15860.674ENSCSAVG00000002001-9362.275Ciona_savignyi
ENSCHIG00000012184PABPN162100.000ENSCANG00000009750BCL2L2-PABPN1100100.000Colobus_angolensis_palliatus
ENSCHIG00000012184PABPN19682.373ENSCANG00000030980-7483.902Colobus_angolensis_palliatus
ENSCHIG00000012184PABPN110097.059ENSCGRG00001019696Pabpn110099.438Cricetulus_griseus_chok1gshd
ENSCHIG00000012184PABPN15899.438ENSCGRG00000011102Pabpn110099.438Cricetulus_griseus_crigri
ENSCHIG00000012184PABPN18670.076ENSCSEG00000008774pabpn18980.476Cynoglossus_semilaevis
ENSCHIG00000012184PABPN18667.803ENSCVAG00000003152pabpn18681.068Cyprinodon_variegatus
ENSCHIG00000012184PABPN18270.518ENSDARG00000045373pabpn18683.495Danio_rerio
ENSCHIG00000012184PABPN110099.673ENSDNOG00000023682PABPN110099.673Dasypus_novemcinctus
ENSCHIG00000012184PABPN110098.366ENSDORG00000028966-10098.366Dipodomys_ordii
ENSCHIG00000012184PABPN16959.906FBgn0005648Pabp28263.351Drosophila_melanogaster
ENSCHIG00000012184PABPN16379.487ENSEBUG00000002322pabpn18379.897Eptatretus_burgeri
ENSCHIG00000012184PABPN110099.673ENSEASG00005011716PABPN110099.673Equus_asinus_asinus
ENSCHIG00000012184PABPN19999.342ENSECAG00000011652PABPN19999.660Equus_caballus
ENSCHIG00000012184PABPN19390.845ENSEEUG00000012973-7292.925Erinaceus_europaeus
ENSCHIG00000012184PABPN18673.485ENSELUG00000022654pabpn18585.437Esox_lucius
ENSCHIG00000012184PABPN110099.673ENSFCAG00000031922PABPN110099.673Felis_catus
ENSCHIG00000012184PABPN15898.876ENSFDAG00000018381BCL2L2-PABPN110098.876Fukomys_damarensis
ENSCHIG00000012184PABPN18666.288ENSFHEG00000007215pabpn18680.097Fundulus_heteroclitus
ENSCHIG00000012184PABPN18270.356ENSGMOG00000003922pabpn16683.505Gadus_morhua
ENSCHIG00000012184PABPN16389.796ENSGALG00000052930-7974.170Gallus_gallus
ENSCHIG00000012184PABPN18670.189ENSGAFG00000017099pabpn18682.126Gambusia_affinis
ENSCHIG00000012184PABPN18667.754ENSGACG00000002167pabpn18777.982Gasterosteus_aculeatus
ENSCHIG00000012184PABPN19381.818ENSGGOG00000025919-9884.459Gorilla_gorilla
ENSCHIG00000012184PABPN19277.660ENSGGOG00000039675-7284.536Gorilla_gorilla
ENSCHIG00000012184PABPN110099.673ENSGGOG00000022683-10099.673Gorilla_gorilla
ENSCHIG00000012184PABPN18670.833ENSHBUG00000019523pabpn18682.524Haplochromis_burtoni
ENSCHIG00000012184PABPN19274.377ENSHGLG00000018588-7181.043Heterocephalus_glaber_female
ENSCHIG00000012184PABPN110098.039ENSHGLG00000002927-10098.039Heterocephalus_glaber_female
ENSCHIG00000012184PABPN15576.048ENSHGLG00000009842-9376.048Heterocephalus_glaber_female
ENSCHIG00000012184PABPN15899.438ENSHGLG00100006673-10099.438Heterocephalus_glaber_male
ENSCHIG00000012184PABPN15588.304ENSHGLG00100018935-9488.304Heterocephalus_glaber_male
ENSCHIG00000012184PABPN19269.286ENSHGLG00100015565-7381.043Heterocephalus_glaber_male
ENSCHIG00000012184PABPN18667.300ENSHCOG00000004655pabpn18681.553Hippocampus_comes
ENSCHIG00000012184PABPN18671.212ENSIPUG00000008085PABPN18683.010Ictalurus_punctatus
ENSCHIG00000012184PABPN18667.045ENSIPUG00000000180-8681.313Ictalurus_punctatus
ENSCHIG00000012184PABPN158100.000ENSSTOG00000029847BCL2L2-PABPN1100100.000Ictidomys_tridecemlineatus
ENSCHIG00000012184PABPN158100.000ENSJJAG00000023507Gm20521100100.000Jaculus_jaculus
ENSCHIG00000012184PABPN16881.429ENSKMAG00000018748pabpn18681.643Kryptolebias_marmoratus
ENSCHIG00000012184PABPN18670.833ENSLBEG00000027266pabpn18682.524Labrus_bergylta
ENSCHIG00000012184PABPN15887.640ENSLACG00000000646pabpn17989.444Latimeria_chalumnae
ENSCHIG00000012184PABPN18271.429ENSLOCG00000000796pabpn16984.021Lepisosteus_oculatus
ENSCHIG00000012184PABPN16865.238ENSLOCG00000004694pabpn1l9565.700Lepisosteus_oculatus
ENSCHIG00000012184PABPN162100.000ENSMFAG00000032183BCL2L2-PABPN1100100.000Macaca_fascicularis
ENSCHIG00000012184PABPN19778.595ENSMMUG00000048382-6883.333Macaca_mulatta
ENSCHIG00000012184PABPN110091.503ENSMMUG00000014747BCL2L2-PABPN1100100.000Macaca_mulatta
ENSCHIG00000012184PABPN110099.673ENSMNEG00000045065BCL2L2-PABPN110099.673Macaca_nemestrina
ENSCHIG00000012184PABPN17482.796ENSMNEG00000035750-9992.908Macaca_nemestrina
ENSCHIG00000012184PABPN19774.324ENSMLEG00000034623-9990.780Mandrillus_leucophaeus
ENSCHIG00000012184PABPN162100.000ENSMLEG00000043862BCL2L2-PABPN1100100.000Mandrillus_leucophaeus
ENSCHIG00000012184PABPN18270.635ENSMAMG00000007979pabpn16881.773Mastacembelus_armatus
ENSCHIG00000012184PABPN18270.238ENSMZEG00005011904pabpn16682.474Maylandia_zebra
ENSCHIG00000012184PABPN19897.010ENSMAUG00000007383Gm205219997.010Mesocricetus_auratus
ENSCHIG00000012184PABPN110099.346ENSMICG00000010002BCL2L2-PABPN110099.346Microcebus_murinus
ENSCHIG00000012184PABPN110096.732ENSMOCG00000018557Gm2052110096.732Microtus_ochrogaster
ENSCHIG00000012184PABPN18671.212ENSMMOG00000005405pabpn18683.010Mola_mola
ENSCHIG00000012184PABPN19996.370ENSMODG00000004535-9996.370Monodelphis_domestica
ENSCHIG00000012184PABPN18270.238ENSMALG00000019612pabpn16781.773Monopterus_albus
ENSCHIG00000012184PABPN110096.078MGP_CAROLIEiJ_G0019277Pabpn110097.753Mus_caroli
ENSCHIG00000012184PABPN16297.884MGP_CAROLIEiJ_G0019276Gm205215797.884Mus_caroli
ENSCHIG00000012184PABPN110096.405ENSMUSG00000022194Pabpn110098.315Mus_musculus
ENSCHIG00000012184PABPN16298.413ENSMUSG00000092232Gm205215798.413Mus_musculus
ENSCHIG00000012184PABPN110096.405MGP_PahariEiJ_G0030295Pabpn110098.315Mus_pahari
ENSCHIG00000012184PABPN16298.413MGP_PahariEiJ_G0030294Gm205215798.413Mus_pahari
ENSCHIG00000012184PABPN110096.405MGP_SPRETEiJ_G0020166Pabpn110098.315Mus_spretus
ENSCHIG00000012184PABPN16298.413MGP_SPRETEiJ_G0020165Gm205215798.413Mus_spretus
ENSCHIG00000012184PABPN154100.000ENSMPUG00000006775-99100.000Mustela_putorius_furo
ENSCHIG00000012184PABPN19288.732ENSMLUG00000012452-7092.523Myotis_lucifugus
ENSCHIG00000012184PABPN16297.884ENSMLUG00000003800-10097.884Myotis_lucifugus
ENSCHIG00000012184PABPN19578.966ENSMLUG00000028677-7594.634Myotis_lucifugus
ENSCHIG00000012184PABPN162100.000ENSNGAG00000019529Gm2052157100.000Nannospalax_galili
ENSCHIG00000012184PABPN18270.238ENSNBRG00000023955pabpn19482.143Neolamprologus_brichardi
ENSCHIG00000012184PABPN169100.000ENSNLEG00000015007-7599.528Nomascus_leucogenys
ENSCHIG00000012184PABPN19776.174ENSNLEG00000030598-7981.604Nomascus_leucogenys
ENSCHIG00000012184PABPN15887.079ENSODEG00000011555-8986.826Octodon_degus
ENSCHIG00000012184PABPN19281.851ENSODEG00000003739-7585.973Octodon_degus
ENSCHIG00000012184PABPN110098.039ENSODEG00000002083BCL2L2-PABPN110098.039Octodon_degus
ENSCHIG00000012184PABPN18270.238ENSONIG00000008112pabpn16682.474Oreochromis_niloticus
ENSCHIG00000012184PABPN19997.039ENSOCUG00000016174PABPN110097.039Oryctolagus_cuniculus
ENSCHIG00000012184PABPN16482.741ENSORLG00000027900pabpn18479.902Oryzias_latipes
ENSCHIG00000012184PABPN16184.492ENSORLG00020004681pabpn16782.266Oryzias_latipes_hni
ENSCHIG00000012184PABPN16882.775ENSORLG00015000018pabpn18683.010Oryzias_latipes_hsok
ENSCHIG00000012184PABPN16879.227ENSOMEG00000016618pabpn17279.412Oryzias_melastigma
ENSCHIG00000012184PABPN110099.673ENSOGAG00000008710PABPN110099.673Otolemur_garnettii
ENSCHIG00000012184PABPN162100.000ENSOARG00000019336BCL2L2-PABPN152100.000Ovis_aries
ENSCHIG00000012184PABPN15583.234ENSPPAG00000039421-9383.234Pan_paniscus
ENSCHIG00000012184PABPN162100.000ENSPPAG00000028984BCL2L2-PABPN199100.000Pan_paniscus
ENSCHIG00000012184PABPN110099.673ENSPPRG00000010567PABPN110099.673Panthera_pardus
ENSCHIG00000012184PABPN158100.000ENSPTIG00000001063BCL2L2-PABPN1100100.000Panthera_tigris_altaica
ENSCHIG00000012184PABPN110099.673ENSPTRG00000006167BCL2L210099.673Pan_troglodytes
ENSCHIG00000012184PABPN19272.340ENSPTRG00000047273-9068.683Pan_troglodytes
ENSCHIG00000012184PABPN110099.673ENSPANG00000021100BCL2L2-PABPN110099.673Papio_anubis
ENSCHIG00000012184PABPN19779.054ENSPANG00000023326-9992.908Papio_anubis
ENSCHIG00000012184PABPN16881.818ENSPKIG00000018052pabpn18682.524Paramormyrops_kingsleyae
ENSCHIG00000012184PABPN16285.789ENSPKIG00000008144-6782.266Paramormyrops_kingsleyae
ENSCHIG00000012184PABPN16463.131ENSPKIG00000008340pabpn1l9263.131Paramormyrops_kingsleyae
ENSCHIG00000012184PABPN18269.444ENSPMGG00000022027pabpn16981.959Periophthalmus_magnuspinnatus
ENSCHIG00000012184PABPN110097.059ENSPEMG00000008332Gm2052110097.059Peromyscus_maniculatus_bairdii
ENSCHIG00000012184PABPN15477.778ENSPMAG00000006212pabpn18476.355Petromyzon_marinus
ENSCHIG00000012184PABPN110096.405ENSPCIG00000027751-10096.405Phascolarctos_cinereus
ENSCHIG00000012184PABPN18667.547ENSPFOG00000010351pabpn18680.676Poecilia_formosa
ENSCHIG00000012184PABPN18269.170ENSPLAG00000022696pabpn16880.882Poecilia_latipinna
ENSCHIG00000012184PABPN18667.547ENSPMEG00000020856pabpn18680.676Poecilia_mexicana
ENSCHIG00000012184PABPN18667.925ENSPREG00000011278pabpn18681.159Poecilia_reticulata
ENSCHIG00000012184PABPN19693.878ENSPPYG00000005663PABPN19993.878Pongo_abelii
ENSCHIG00000012184PABPN16884.834ENSPCAG00000005902PABPN17284.834Procavia_capensis
ENSCHIG00000012184PABPN110099.346ENSPCOG00000028047BCL2L2-PABPN110099.346Propithecus_coquereli
ENSCHIG00000012184PABPN110096.732ENSPVAG00000005270PABPN110096.732Pteropus_vampyrus
ENSCHIG00000012184PABPN18670.833ENSPNYG00000013182pabpn18682.524Pundamilia_nyererei
ENSCHIG00000012184PABPN18671.970ENSPNAG00000023526pabpn18683.981Pygocentrus_nattereri
ENSCHIG00000012184PABPN16562.500ENSPNAG00000021666pabpn1l9464.179Pygocentrus_nattereri
ENSCHIG00000012184PABPN110096.732ENSRNOG00000042195Pabpn110096.732Rattus_norvegicus
ENSCHIG00000012184PABPN19285.000ENSRBIG00000042811-8885.849Rhinopithecus_bieti
ENSCHIG00000012184PABPN19783.333ENSRBIG00000039547-7585.366Rhinopithecus_bieti
ENSCHIG00000012184PABPN158100.000ENSRBIG00000040762BCL2L2-PABPN155100.000Rhinopithecus_bieti
ENSCHIG00000012184PABPN19983.279ENSRROG00000040409-7585.854Rhinopithecus_roxellana
ENSCHIG00000012184PABPN19281.786ENSRROG00000036409-6782.488Rhinopithecus_roxellana
ENSCHIG00000012184PABPN158100.000ENSRROG00000045535BCL2L2-PABPN1100100.000Rhinopithecus_roxellana
ENSCHIG00000012184PABPN16293.564ENSSBOG00000026930BCL2L2-PABPN199100.000Saimiri_boliviensis_boliviensis
ENSCHIG00000012184PABPN18765.660ENSSHAG00000007707-9074.057Sarcophilus_harrisii
ENSCHIG00000012184PABPN17187.156ENSSHAG00000014841-8797.354Sarcophilus_harrisii
ENSCHIG00000012184PABPN17177.828ENSSFOG00015012565pabpn19081.553Scleropages_formosus
ENSCHIG00000012184PABPN18670.076ENSSFOG00015014718pabpn18682.039Scleropages_formosus
ENSCHIG00000012184PABPN16661.084ENSSFOG00015015833pabpn1l8763.918Scleropages_formosus
ENSCHIG00000012184PABPN18670.833ENSSMAG00000020157pabpn18682.524Scophthalmus_maximus
ENSCHIG00000012184PABPN18270.238ENSSDUG00000020582pabpn16781.773Seriola_dumerili
ENSCHIG00000012184PABPN18670.833ENSSLDG00000007118pabpn18682.524Seriola_lalandi_dorsalis
ENSCHIG00000012184PABPN15591.617ENSSPUG00000018308-9491.617Sphenodon_punctatus
ENSCHIG00000012184PABPN18670.833ENSSPAG00000021658pabpn18682.524Stegastes_partitus
ENSCHIG00000012184PABPN110099.673ENSSSCG00000002023PABPN110099.673Sus_scrofa
ENSCHIG00000012184PABPN17373.543ENSSSCG00000034805-7669.118Sus_scrofa
ENSCHIG00000012184PABPN15855.114ENSSSCG00000038472-9154.491Sus_scrofa
ENSCHIG00000012184PABPN18671.212ENSTRUG00000023664pabpn18683.010Takifugu_rubripes
ENSCHIG00000012184PABPN16879.524ENSTNIG00000005369pabpn19379.710Tetraodon_nigroviridis
ENSCHIG00000012184PABPN110099.020ENSUAMG00000024460PABPN110099.020Ursus_americanus
ENSCHIG00000012184PABPN162100.000ENSUMAG00000014288BCL2L2-PABPN157100.000Ursus_maritimus
ENSCHIG00000012184PABPN162100.000ENSVVUG00000019912BCL2L2-PABPN17698.446Vulpes_vulpes
ENSCHIG00000012184PABPN16490.306ENSXETG00000014597pabpn16692.893Xenopus_tropicalis
ENSCHIG00000012184PABPN15768.927ENSXCOG00000005158pabpn18981.579Xiphophorus_couchianus
ENSCHIG00000012184PABPN18668.302ENSXMAG00000006196pabpn18681.643Xiphophorus_maculatus

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