EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000012260 (Gene tree)
Gene ID: 102186838
Gene Symbol: PUS3
Alias: FKSG32
Full Name: pseudouridine synthase 3
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 12316 bases
Position: chr29:28586946-28599261
Accession: 102186838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000009381	PseudoU_synth_1	PF01416.20	1.7e-34	1	1
ENSCHIP00000009372	PseudoU_synth_1	PF01416.20	5.9e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000017153	PUS3-202	5874	XM_005699602	ENSCHIP00000009381	481 (aa)	XP_005699659	UPI0008479510
ENSCHIT00000017144	PUS3-201	5839	-	ENSCHIP00000009372	428 (aa)	-	UPI000D18C3B7

Gene Model

Click here to download ENSCHIG00000012260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000012260's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000012260	PUS3	99	87.318	ENSG00000110060	PUS3	99	88.971	Homo_sapiens
ENSCHIG00000012260	PUS3	89	52.546	ENSAPOG00000019483	pus3	93	52.436	Acanthochromis_polyacanthus
ENSCHIG00000012260	PUS3	100	89.605	ENSAMEG00000000144	PUS3	100	89.605	Ailuropoda_melanoleuca
ENSCHIG00000012260	PUS3	64	60.000	ENSACIG00000024479	pus3	99	55.380	Amphilophus_citrinellus
ENSCHIG00000012260	PUS3	89	50.330	ENSAOCG00000006589	pus3	91	50.439	Amphiprion_ocellaris
ENSCHIG00000012260	PUS3	89	49.889	ENSAPEG00000014617	pus3	91	50.000	Amphiprion_percula
ENSCHIG00000012260	PUS3	89	50.340	ENSATEG00000022731	pus3	90	50.226	Anabas_testudineus
ENSCHIG00000012260	PUS3	89	70.843	ENSAPLG00000013285	PUS3	98	70.843	Anas_platyrhynchos
ENSCHIG00000012260	PUS3	90	68.864	ENSACAG00000000186	PUS3	96	68.864	Anolis_carolinensis
ENSCHIG00000012260	PUS3	99	87.318	ENSANAG00000035614	PUS3	99	87.318	Aotus_nancymaae
ENSCHIG00000012260	PUS3	89	50.554	ENSACLG00000007356	pus3	92	50.664	Astatotilapia_calliptera
ENSCHIG00000012260	PUS3	88	51.991	ENSAMXG00000019534	pus3	93	51.392	Astyanax_mexicanus
ENSCHIG00000012260	PUS3	99	96.458	ENSBTAG00000014339	PUS3	99	96.458	Bos_taurus
ENSCHIG00000012260	PUS3	75	35.758	WBGene00006473	tag-124	93	35.190	Caenorhabditis_elegans
ENSCHIG00000012260	PUS3	99	86.902	ENSCJAG00000046645	PUS3	99	86.902	Callithrix_jacchus
ENSCHIG00000012260	PUS3	100	87.318	ENSCAFG00000010534	PUS3	100	87.318	Canis_familiaris
ENSCHIG00000012260	PUS3	100	87.318	ENSCAFG00020010659	PUS3	100	87.318	Canis_lupus_dingo
ENSCHIG00000012260	PUS3	99	88.750	ENSTSYG00000014744	PUS3	99	88.750	Carlito_syrichta
ENSCHIG00000012260	PUS3	99	83.160	ENSCAPG00000012231	PUS3	99	83.160	Cavia_aperea
ENSCHIG00000012260	PUS3	99	83.160	ENSCPOG00000032587	PUS3	99	83.160	Cavia_porcellus
ENSCHIG00000012260	PUS3	99	86.611	ENSCCAG00000035999	PUS3	99	86.611	Cebus_capucinus
ENSCHIG00000012260	PUS3	99	86.694	ENSCATG00000043123	PUS3	99	86.694	Cercocebus_atys
ENSCHIG00000012260	PUS3	99	85.863	ENSCLAG00000014947	PUS3	99	85.863	Chinchilla_lanigera
ENSCHIG00000012260	PUS3	99	86.486	ENSCSAG00000002281	PUS3	99	86.486	Chlorocebus_sabaeus
ENSCHIG00000012260	PUS3	79	85.979	ENSCHOG00000008442	PUS3	100	85.979	Choloepus_hoffmanni
ENSCHIG00000012260	PUS3	63	73.022	ENSCPBG00000011173	PUS3	98	73.022	Chrysemys_picta_bellii
ENSCHIG00000012260	PUS3	68	36.190	ENSCING00000009062	-	65	36.578	Ciona_intestinalis
ENSCHIG00000012260	PUS3	85	36.557	ENSCSAVG00000002211	-	94	36.905	Ciona_savignyi
ENSCHIG00000012260	PUS3	99	85.655	ENSCANG00000038729	PUS3	99	85.655	Colobus_angolensis_palliatus
ENSCHIG00000012260	PUS3	100	85.093	ENSCGRG00001019842	Pus3	100	85.093	Cricetulus_griseus_chok1gshd
ENSCHIG00000012260	PUS3	100	84.679	ENSCGRG00000010155	Pus3	100	84.679	Cricetulus_griseus_crigri
ENSCHIG00000012260	PUS3	88	51.620	ENSCSEG00000007948	pus3	89	51.620	Cynoglossus_semilaevis
ENSCHIG00000012260	PUS3	89	49.224	ENSCVAG00000022150	pus3	91	49.224	Cyprinodon_variegatus
ENSCHIG00000012260	PUS3	89	53.811	ENSDARG00000028976	pus3	93	53.125	Danio_rerio
ENSCHIG00000012260	PUS3	99	86.128	ENSDNOG00000040719	PUS3	100	86.128	Dasypus_novemcinctus
ENSCHIG00000012260	PUS3	100	83.195	ENSDORG00000001819	Pus3	100	83.195	Dipodomys_ordii
ENSCHIG00000012260	PUS3	89	38.983	FBgn0034703	CG3045	89	38.983	Drosophila_melanogaster
ENSCHIG00000012260	PUS3	99	80.625	ENSETEG00000013067	PUS3	99	80.625	Echinops_telfairi
ENSCHIG00000012260	PUS3	88	46.212	ENSEBUG00000002154	pus3	68	46.212	Eptatretus_burgeri
ENSCHIG00000012260	PUS3	99	89.167	ENSEASG00005023003	PUS3	99	89.167	Equus_asinus_asinus
ENSCHIG00000012260	PUS3	99	89.583	ENSECAG00000007581	PUS3	99	89.583	Equus_caballus
ENSCHIG00000012260	PUS3	99	84.551	ENSEEUG00000010543	PUS3	99	84.551	Erinaceus_europaeus
ENSCHIG00000012260	PUS3	89	53.881	ENSELUG00000004425	pus3	92	53.531	Esox_lucius
ENSCHIG00000012260	PUS3	100	89.189	ENSFCAG00000005340	PUS3	100	89.189	Felis_catus
ENSCHIG00000012260	PUS3	99	63.992	ENSFALG00000005159	PUS3	100	63.992	Ficedula_albicollis
ENSCHIG00000012260	PUS3	99	85.447	ENSFDAG00000020745	PUS3	99	85.447	Fukomys_damarensis
ENSCHIG00000012260	PUS3	95	47.023	ENSFHEG00000010984	pus3	91	47.023	Fundulus_heteroclitus
ENSCHIG00000012260	PUS3	89	50.797	ENSGMOG00000004534	pus3	95	50.797	Gadus_morhua
ENSCHIG00000012260	PUS3	94	67.100	ENSGALG00000000962	PUS3	98	67.100	Gallus_gallus
ENSCHIG00000012260	PUS3	88	48.546	ENSGAFG00000005615	pus3	90	48.770	Gambusia_affinis
ENSCHIG00000012260	PUS3	89	50.343	ENSGACG00000002125	pus3	90	51.598	Gasterosteus_aculeatus
ENSCHIG00000012260	PUS3	99	71.341	ENSGAGG00000000160	PUS3	99	71.341	Gopherus_agassizii
ENSCHIG00000012260	PUS3	99	87.526	ENSGGOG00000015047	PUS3	99	87.526	Gorilla_gorilla
ENSCHIG00000012260	PUS3	89	50.111	ENSHBUG00000016532	pus3	92	50.221	Haplochromis_burtoni
ENSCHIG00000012260	PUS3	64	72.426	ENSHGLG00000016285	-	99	72.426	Heterocephalus_glaber_female
ENSCHIG00000012260	PUS3	99	86.486	ENSHGLG00000000565	PUS3	99	86.486	Heterocephalus_glaber_female
ENSCHIG00000012260	PUS3	67	76.636	ENSHGLG00000015753	-	82	76.792	Heterocephalus_glaber_female
ENSCHIG00000012260	PUS3	100	79.046	ENSHGLG00000006599	-	97	79.046	Heterocephalus_glaber_female
ENSCHIG00000012260	PUS3	99	73.389	ENSHGLG00000018861	-	99	73.389	Heterocephalus_glaber_female
ENSCHIG00000012260	PUS3	99	80.417	ENSHGLG00100014825	-	99	80.417	Heterocephalus_glaber_male
ENSCHIG00000012260	PUS3	64	74.265	ENSHGLG00100002139	-	99	74.265	Heterocephalus_glaber_male
ENSCHIG00000012260	PUS3	65	83.121	ENSHGLG00100008656	-	99	83.121	Heterocephalus_glaber_male
ENSCHIG00000012260	PUS3	60	75.862	ENSHGLG00100002435	-	100	75.862	Heterocephalus_glaber_male
ENSCHIG00000012260	PUS3	99	71.018	ENSHGLG00100011339	-	99	71.018	Heterocephalus_glaber_male
ENSCHIG00000012260	PUS3	100	70.954	ENSHGLG00100007519	-	96	70.954	Heterocephalus_glaber_male
ENSCHIG00000012260	PUS3	88	50.917	ENSHCOG00000015705	pus3	92	50.913	Hippocampus_comes
ENSCHIG00000012260	PUS3	54	30.241	ENSIPUG00000010387	pus1	61	30.241	Ictalurus_punctatus
ENSCHIG00000012260	PUS3	89	50.000	ENSIPUG00000000105	pus3	89	50.112	Ictalurus_punctatus
ENSCHIG00000012260	PUS3	99	86.458	ENSSTOG00000003721	PUS3	99	86.458	Ictidomys_tridecemlineatus
ENSCHIG00000012260	PUS3	99	83.542	ENSJJAG00000011306	Pus3	99	83.542	Jaculus_jaculus
ENSCHIG00000012260	PUS3	89	48.465	ENSKMAG00000016715	pus3	91	48.684	Kryptolebias_marmoratus
ENSCHIG00000012260	PUS3	89	48.961	ENSLBEG00000004143	pus3	91	48.961	Labrus_bergylta
ENSCHIG00000012260	PUS3	96	60.707	ENSLACG00000011161	PUS3	96	60.707	Latimeria_chalumnae
ENSCHIG00000012260	PUS3	91	50.000	ENSLOCG00000011922	pus3	97	50.000	Lepisosteus_oculatus
ENSCHIG00000012260	PUS3	99	86.875	ENSLAFG00000000535	PUS3	99	86.875	Loxodonta_africana
ENSCHIG00000012260	PUS3	99	86.192	ENSMFAG00000041002	PUS3	99	86.192	Macaca_fascicularis
ENSCHIG00000012260	PUS3	99	86.192	ENSMMUG00000041875	PUS3	99	86.192	Macaca_mulatta
ENSCHIG00000012260	PUS3	99	86.402	ENSMNEG00000045347	PUS3	99	86.402	Macaca_nemestrina
ENSCHIG00000012260	PUS3	99	86.486	ENSMLEG00000029053	PUS3	99	86.486	Mandrillus_leucophaeus
ENSCHIG00000012260	PUS3	84	53.552	ENSMAMG00000016741	pus3	91	50.441	Mastacembelus_armatus
ENSCHIG00000012260	PUS3	89	50.554	ENSMZEG00005015950	pus3	92	50.664	Maylandia_zebra
ENSCHIG00000012260	PUS3	82	69.059	ENSMGAG00000000851	PUS3	99	69.923	Meleagris_gallopavo
ENSCHIG00000012260	PUS3	100	85.507	ENSMAUG00000015873	Pus3	100	85.507	Mesocricetus_auratus
ENSCHIG00000012260	PUS3	100	87.110	ENSMICG00000032941	PUS3	100	87.110	Microcebus_murinus
ENSCHIG00000012260	PUS3	100	85.300	ENSMOCG00000004901	Pus3	100	85.300	Microtus_ochrogaster
ENSCHIG00000012260	PUS3	88	51.508	ENSMMOG00000013909	pus3	90	51.501	Mola_mola
ENSCHIG00000012260	PUS3	91	78.924	ENSMODG00000004222	PUS3	99	78.924	Monodelphis_domestica
ENSCHIG00000012260	PUS3	89	52.294	ENSMALG00000022420	pus3	90	52.403	Monopterus_albus
ENSCHIG00000012260	PUS3	100	83.918	MGP_CAROLIEiJ_G0031957	Pus3	99	85.804	Mus_caroli
ENSCHIG00000012260	PUS3	100	82.887	ENSMUSG00000032103	Pus3	99	85.804	Mus_musculus
ENSCHIG00000012260	PUS3	100	82.887	MGP_PahariEiJ_G0014822	Pus3	99	85.489	Mus_pahari
ENSCHIG00000012260	PUS3	100	82.887	MGP_SPRETEiJ_G0033081	Pus3	99	85.489	Mus_spretus
ENSCHIG00000012260	PUS3	100	89.605	ENSMPUG00000006568	PUS3	100	89.605	Mustela_putorius_furo
ENSCHIG00000012260	PUS3	99	87.917	ENSMLUG00000030636	PUS3	99	87.917	Myotis_lucifugus
ENSCHIG00000012260	PUS3	99	85.625	ENSNGAG00000013868	Pus3	100	85.625	Nannospalax_galili
ENSCHIG00000012260	PUS3	89	50.333	ENSNBRG00000015864	pus3	93	50.442	Neolamprologus_brichardi
ENSCHIG00000012260	PUS3	99	87.110	ENSNLEG00000007460	PUS3	99	87.110	Nomascus_leucogenys
ENSCHIG00000012260	PUS3	85	77.116	ENSMEUG00000014040	PUS3	85	77.116	Notamacropus_eugenii
ENSCHIG00000012260	PUS3	99	86.042	ENSOPRG00000007888	-	99	86.042	Ochotona_princeps
ENSCHIG00000012260	PUS3	99	84.407	ENSODEG00000004280	PUS3	99	84.407	Octodon_degus
ENSCHIG00000012260	PUS3	89	51.606	ENSONIG00000016224	pus3	98	51.264	Oreochromis_niloticus
ENSCHIG00000012260	PUS3	98	68.000	ENSOANG00000000406	PUS3	98	67.865	Ornithorhynchus_anatinus
ENSCHIG00000012260	PUS3	98	85.319	ENSOCUG00000004468	PUS3	92	85.319	Oryctolagus_cuniculus
ENSCHIG00000012260	PUS3	89	47.894	ENSORLG00000008445	pus3	91	48.009	Oryzias_latipes
ENSCHIG00000012260	PUS3	89	48.018	ENSORLG00020008847	pus3	93	47.742	Oryzias_latipes_hni
ENSCHIG00000012260	PUS3	89	48.018	ENSORLG00015007438	pus3	93	47.742	Oryzias_latipes_hsok
ENSCHIG00000012260	PUS3	89	49.206	ENSOMEG00000014321	pus3	93	48.899	Oryzias_melastigma
ENSCHIG00000012260	PUS3	99	87.056	ENSOGAG00000008913	PUS3	99	87.056	Otolemur_garnettii
ENSCHIG00000012260	PUS3	99	98.542	ENSOARG00000011870	PUS3	99	98.542	Ovis_aries
ENSCHIG00000012260	PUS3	99	87.318	ENSPPAG00000025809	PUS3	99	87.318	Pan_paniscus
ENSCHIG00000012260	PUS3	100	88.565	ENSPPRG00000005662	PUS3	100	88.565	Panthera_pardus
ENSCHIG00000012260	PUS3	100	88.773	ENSPTIG00000001192	PUS3	100	88.773	Panthera_tigris_altaica
ENSCHIG00000012260	PUS3	99	87.526	ENSPTRG00000004449	PUS3	99	87.526	Pan_troglodytes
ENSCHIG00000012260	PUS3	99	86.694	ENSPANG00000013782	PUS3	99	86.694	Papio_anubis
ENSCHIG00000012260	PUS3	89	51.542	ENSPKIG00000000646	pus3	92	51.542	Paramormyrops_kingsleyae
ENSCHIG00000012260	PUS3	99	69.512	ENSPSIG00000013961	PUS3	99	69.512	Pelodiscus_sinensis
ENSCHIG00000012260	PUS3	88	50.000	ENSPMGG00000000911	pus3	93	50.831	Periophthalmus_magnuspinnatus
ENSCHIG00000012260	PUS3	100	86.364	ENSPEMG00000009602	Pus3	100	86.364	Peromyscus_maniculatus_bairdii
ENSCHIG00000012260	PUS3	98	76.569	ENSPCIG00000010225	PUS3	99	76.569	Phascolarctos_cinereus
ENSCHIG00000012260	PUS3	88	50.812	ENSPFOG00000009447	pus3	94	50.812	Poecilia_formosa
ENSCHIG00000012260	PUS3	88	49.443	ENSPLAG00000023343	pus3	90	49.443	Poecilia_latipinna
ENSCHIG00000012260	PUS3	88	49.443	ENSPMEG00000009870	pus3	90	49.443	Poecilia_mexicana
ENSCHIG00000012260	PUS3	60	59.661	ENSPREG00000003179	pus3	56	59.661	Poecilia_reticulata
ENSCHIG00000012260	PUS3	99	87.526	ENSPPYG00000004039	PUS3	99	87.526	Pongo_abelii
ENSCHIG00000012260	PUS3	99	84.375	ENSPCAG00000000441	PUS3	100	84.375	Procavia_capensis
ENSCHIG00000012260	PUS3	100	88.773	ENSPCOG00000019330	PUS3	100	88.773	Propithecus_coquereli
ENSCHIG00000012260	PUS3	99	86.875	ENSPVAG00000002606	PUS3	99	86.875	Pteropus_vampyrus
ENSCHIG00000012260	PUS3	89	50.333	ENSPNYG00000019615	pus3	92	50.442	Pundamilia_nyererei
ENSCHIG00000012260	PUS3	54	30.584	ENSPNAG00000003938	pus1	60	30.584	Pygocentrus_nattereri
ENSCHIG00000012260	PUS3	88	52.902	ENSPNAG00000014541	pus3	89	53.007	Pygocentrus_nattereri
ENSCHIG00000012260	PUS3	100	83.644	ENSRNOG00000012994	Pus3	100	83.644	Rattus_norvegicus
ENSCHIG00000012260	PUS3	99	85.239	ENSRBIG00000044456	PUS3	99	85.239	Rhinopithecus_bieti
ENSCHIG00000012260	PUS3	99	86.071	ENSRROG00000035245	PUS3	99	86.071	Rhinopithecus_roxellana
ENSCHIG00000012260	PUS3	67	43.413	YFL001W	DEG1	71	43.413	Saccharomyces_cerevisiae
ENSCHIG00000012260	PUS3	99	86.694	ENSSBOG00000022433	PUS3	99	86.694	Saimiri_boliviensis_boliviensis
ENSCHIG00000012260	PUS3	99	76.349	ENSSHAG00000001382	PUS3	99	76.349	Sarcophilus_harrisii
ENSCHIG00000012260	PUS3	89	55.916	ENSSFOG00015004850	pus3	92	55.916	Scleropages_formosus
ENSCHIG00000012260	PUS3	89	48.148	ENSSMAG00000020340	pus3	91	48.261	Scophthalmus_maximus
ENSCHIG00000012260	PUS3	88	48.584	ENSSDUG00000020825	pus3	90	49.667	Seriola_dumerili
ENSCHIG00000012260	PUS3	88	48.667	ENSSLDG00000019932	pus3	90	48.780	Seriola_lalandi_dorsalis
ENSCHIG00000012260	PUS3	65	84.395	ENSSARG00000013826	PUS3	100	84.395	Sorex_araneus
ENSCHIG00000012260	PUS3	99	70.000	ENSSPUG00000001412	PUS3	99	70.000	Sphenodon_punctatus
ENSCHIG00000012260	PUS3	89	51.157	ENSSPAG00000019221	pus3	92	51.270	Stegastes_partitus
ENSCHIG00000012260	PUS3	99	89.792	ENSSSCG00000015222	PUS3	100	89.792	Sus_scrofa
ENSCHIG00000012260	PUS3	91	67.269	ENSTGUG00000000778	-	100	67.269	Taeniopygia_guttata
ENSCHIG00000012260	PUS3	89	48.884	ENSTRUG00000013050	pus3	95	48.884	Takifugu_rubripes
ENSCHIG00000012260	PUS3	89	48.970	ENSTNIG00000004929	PUS3	91	48.970	Tetraodon_nigroviridis
ENSCHIG00000012260	PUS3	76	49.871	ENSTNIG00000010307	pus3	93	49.871	Tetraodon_nigroviridis
ENSCHIG00000012260	PUS3	95	76.419	ENSTBEG00000004382	PUS3	100	76.419	Tupaia_belangeri
ENSCHIG00000012260	PUS3	99	91.458	ENSTTRG00000012167	PUS3	99	91.458	Tursiops_truncatus
ENSCHIG00000012260	PUS3	100	89.605	ENSUAMG00000009297	PUS3	100	89.605	Ursus_americanus
ENSCHIG00000012260	PUS3	100	90.021	ENSUMAG00000001795	PUS3	100	90.021	Ursus_maritimus
ENSCHIG00000012260	PUS3	100	88.565	ENSVPAG00000001495	PUS3	100	88.565	Vicugna_pacos
ENSCHIG00000012260	PUS3	100	87.318	ENSVVUG00000020152	PUS3	100	87.318	Vulpes_vulpes
ENSCHIG00000012260	PUS3	89	57.763	ENSXETG00000024532	pus3	80	57.763	Xenopus_tropicalis
ENSCHIG00000012260	PUS3	92	49.127	ENSXMAG00000028016	pus3	95	49.889	Xiphophorus_maculatus
ENSCHIG00000012260	PUS3	56	57.438	ENSXMAG00000025146	pus3	78	58.661	Xiphophorus_maculatus
ENSCHIG00000012260	PUS3	56	57.438	ENSXMAG00000028945	pus3	84	58.661	Xiphophorus_maculatus
ENSCHIG00000012260	PUS3	69	54.849	ENSXMAG00000029934	pus3	71	56.129	Xiphophorus_maculatus
ENSCHIG00000012260	PUS3	69	55.034	ENSXMAG00000025077	pus3	71	56.311	Xiphophorus_maculatus
ENSCHIG00000012260	PUS3	69	55.034	ENSXMAG00000025659	PUS3	52	56.129	Xiphophorus_maculatus