EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000012271 (Gene tree)
Gene ID: 102170559
Gene Symbol: SHQ1
Alias: FLJ10539|Shq1p
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 98448 bases
Position: chr22:28786367-28884814
Accession: 102170559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000009391	SHQ1	PF04925.15	1.8e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000017164	SHQ1-201	1917	XM_005695727	ENSCHIP00000009391	638 (aa)	XP_005695784	UPI000D18DEB4

Gene Model

Click here to download ENSCHIG00000012271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000012271's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000012271	SHQ1	91	81.239	ENSG00000144736	SHQ1	96	95.833	Homo_sapiens
ENSCHIG00000012271	SHQ1	68	62.700	ENSAPOG00000000397	shq1	92	53.993	Acanthochromis_polyacanthus
ENSCHIG00000012271	SHQ1	91	82.556	ENSAMEG00000015140	SHQ1	100	82.556	Ailuropoda_melanoleuca
ENSCHIG00000012271	SHQ1	68	62.069	ENSACIG00000021249	shq1	92	53.913	Amphilophus_citrinellus
ENSCHIG00000012271	SHQ1	69	63.535	ENSAOCG00000023311	shq1	93	54.514	Amphiprion_ocellaris
ENSCHIG00000012271	SHQ1	69	62.864	ENSAPEG00000021686	shq1	91	55.245	Amphiprion_percula
ENSCHIG00000012271	SHQ1	68	63.470	ENSATEG00000008475	shq1	89	55.054	Anabas_testudineus
ENSCHIG00000012271	SHQ1	80	64.314	ENSAPLG00000013926	SHQ1	99	63.529	Anas_platyrhynchos
ENSCHIG00000012271	SHQ1	90	59.689	ENSACAG00000014809	SHQ1	92	58.132	Anolis_carolinensis
ENSCHIG00000012271	SHQ1	90	61.150	ENSANAG00000030500	-	99	58.362	Aotus_nancymaae
ENSCHIG00000012271	SHQ1	91	80.484	ENSANAG00000029241	SHQ1	100	79.620	Aotus_nancymaae
ENSCHIG00000012271	SHQ1	71	59.519	ENSACLG00000023077	shq1	94	49.592	Astatotilapia_calliptera
ENSCHIG00000012271	SHQ1	68	56.019	ENSAMXG00000043822	shq1	65	59.103	Astyanax_mexicanus
ENSCHIG00000012271	SHQ1	91	96.373	ENSBTAG00000005436	SHQ1	100	96.373	Bos_taurus
ENSCHIG00000012271	SHQ1	67	34.014	WBGene00021655	Y48A5A.1	88	34.568	Caenorhabditis_elegans
ENSCHIG00000012271	SHQ1	91	79.346	ENSCJAG00000015131	SHQ1	100	78.485	Callithrix_jacchus
ENSCHIG00000012271	SHQ1	91	82.211	ENSCAFG00000006434	SHQ1	99	82.211	Canis_familiaris
ENSCHIG00000012271	SHQ1	91	82.038	ENSCAFG00020016743	SHQ1	99	82.038	Canis_lupus_dingo
ENSCHIG00000012271	SHQ1	90	75.874	ENSTSYG00000014439	SHQ1	99	75.175	Carlito_syrichta
ENSCHIG00000012271	SHQ1	75	84.568	ENSCAPG00000009343	SHQ1	96	91.558	Cavia_aperea
ENSCHIG00000012271	SHQ1	90	75.722	ENSCPOG00000011443	SHQ1	99	75.170	Cavia_porcellus
ENSCHIG00000012271	SHQ1	91	72.021	ENSCCAG00000027080	SHQ1	100	70.466	Cebus_capucinus
ENSCHIG00000012271	SHQ1	90	61.765	ENSCCAG00000036087	-	99	59.343	Cebus_capucinus
ENSCHIG00000012271	SHQ1	91	81.411	ENSCATG00000041238	SHQ1	100	79.174	Cercocebus_atys
ENSCHIG00000012271	SHQ1	90	76.460	ENSCLAG00000004206	SHQ1	99	76.724	Chinchilla_lanigera
ENSCHIG00000012271	SHQ1	77	77.846	ENSCSAG00000011514	SHQ1	100	75.203	Chlorocebus_sabaeus
ENSCHIG00000012271	SHQ1	89	64.974	ENSCPBG00000006441	SHQ1	93	64.974	Chrysemys_picta_bellii
ENSCHIG00000012271	SHQ1	62	43.142	ENSCING00000008013	-	85	42.105	Ciona_intestinalis
ENSCHIG00000012271	SHQ1	62	42.714	ENSCSAVG00000002332	-	88	42.714	Ciona_savignyi
ENSCHIG00000012271	SHQ1	90	81.076	ENSCANG00000039295	SHQ1	100	78.819	Colobus_angolensis_palliatus
ENSCHIG00000012271	SHQ1	91	75.172	ENSCGRG00001012583	Shq1	100	82.787	Cricetulus_griseus_chok1gshd
ENSCHIG00000012271	SHQ1	91	75.172	ENSCGRG00000009849	Shq1	100	82.787	Cricetulus_griseus_crigri
ENSCHIG00000012271	SHQ1	66	62.530	ENSCSEG00000007829	shq1	91	53.469	Cynoglossus_semilaevis
ENSCHIG00000012271	SHQ1	68	61.327	ENSCVAG00000020049	shq1	98	52.292	Cyprinodon_variegatus
ENSCHIG00000012271	SHQ1	68	59.404	ENSDARG00000058522	shq1	66	60.050	Danio_rerio
ENSCHIG00000012271	SHQ1	91	80.345	ENSDNOG00000033937	SHQ1	100	80.345	Dasypus_novemcinctus
ENSCHIG00000012271	SHQ1	90	64.786	ENSETEG00000005766	SHQ1	99	65.862	Echinops_telfairi
ENSCHIG00000012271	SHQ1	61	47.692	ENSEBUG00000005445	shq1	69	50.809	Eptatretus_burgeri
ENSCHIG00000012271	SHQ1	91	83.765	ENSEASG00005002237	SHQ1	100	83.765	Equus_asinus_asinus
ENSCHIG00000012271	SHQ1	88	84.725	ENSECAG00000015673	SHQ1	95	84.725	Equus_caballus
ENSCHIG00000012271	SHQ1	91	80.656	ENSEEUG00000010568	SHQ1	100	80.656	Erinaceus_europaeus
ENSCHIG00000012271	SHQ1	61	58.505	ENSELUG00000003476	shq1	89	52.857	Esox_lucius
ENSCHIG00000012271	SHQ1	91	81.347	ENSFCAG00000012781	SHQ1	100	81.347	Felis_catus
ENSCHIG00000012271	SHQ1	91	61.073	ENSFALG00000013428	SHQ1	94	61.073	Ficedula_albicollis
ENSCHIG00000012271	SHQ1	95	68.906	ENSFDAG00000005595	SHQ1	98	67.812	Fukomys_damarensis
ENSCHIG00000012271	SHQ1	92	50.573	ENSFHEG00000017552	shq1	95	52.890	Fundulus_heteroclitus
ENSCHIG00000012271	SHQ1	62	58.690	ENSGMOG00000007350	shq1	100	58.690	Gadus_morhua
ENSCHIG00000012271	SHQ1	91	61.379	ENSGALG00000007798	SHQ1	94	61.379	Gallus_gallus
ENSCHIG00000012271	SHQ1	62	60.957	ENSGACG00000011797	shq1	100	59.698	Gasterosteus_aculeatus
ENSCHIG00000012271	SHQ1	91	80.723	ENSGGOG00000034818	SHQ1	100	78.485	Gorilla_gorilla
ENSCHIG00000012271	SHQ1	90	52.740	ENSHBUG00000010857	shq1	94	52.659	Haplochromis_burtoni
ENSCHIG00000012271	SHQ1	94	72.669	ENSHGLG00000003637	SHQ1	93	71.659	Heterocephalus_glaber_female
ENSCHIG00000012271	SHQ1	94	72.903	ENSHGLG00100011957	SHQ1	93	71.429	Heterocephalus_glaber_male
ENSCHIG00000012271	SHQ1	86	52.555	ENSHCOG00000010799	shq1	90	53.102	Hippocampus_comes
ENSCHIG00000012271	SHQ1	68	59.132	ENSIPUG00000001247	shq1	91	50.000	Ictalurus_punctatus
ENSCHIG00000012271	SHQ1	89	72.261	ENSSTOG00000010043	SHQ1	99	72.487	Ictidomys_tridecemlineatus
ENSCHIG00000012271	SHQ1	91	73.748	ENSJJAG00000017611	Shq1	100	81.967	Jaculus_jaculus
ENSCHIG00000012271	SHQ1	87	53.131	ENSKMAG00000004457	shq1	91	53.131	Kryptolebias_marmoratus
ENSCHIG00000012271	SHQ1	90	57.778	ENSLACG00000014243	SHQ1	88	60.034	Latimeria_chalumnae
ENSCHIG00000012271	SHQ1	87	57.348	ENSLOCG00000009970	shq1	96	56.810	Lepisosteus_oculatus
ENSCHIG00000012271	SHQ1	90	58.448	ENSMFAG00000037396	-	99	56.799	Macaca_fascicularis
ENSCHIG00000012271	SHQ1	91	80.207	ENSMFAG00000039148	SHQ1	100	79.002	Macaca_fascicularis
ENSCHIG00000012271	SHQ1	90	58.276	ENSMMUG00000021761	-	99	56.627	Macaca_mulatta
ENSCHIG00000012271	SHQ1	83	78.612	ENSMMUG00000009571	SHQ1	96	77.298	Macaca_mulatta
ENSCHIG00000012271	SHQ1	91	80.207	ENSMNEG00000032667	SHQ1	100	79.002	Macaca_nemestrina
ENSCHIG00000012271	SHQ1	91	80.207	ENSMLEG00000038493	SHQ1	100	79.002	Mandrillus_leucophaeus
ENSCHIG00000012271	SHQ1	91	52.066	ENSMAMG00000023432	shq1	91	52.239	Mastacembelus_armatus
ENSCHIG00000012271	SHQ1	69	60.811	ENSMZEG00005008649	shq1	94	52.487	Maylandia_zebra
ENSCHIG00000012271	SHQ1	91	60.720	ENSMGAG00000009640	SHQ1	94	59.828	Meleagris_gallopavo
ENSCHIG00000012271	SHQ1	91	75.000	ENSMAUG00000022030	Shq1	100	83.607	Mesocricetus_auratus
ENSCHIG00000012271	SHQ1	91	78.705	ENSMICG00000009224	SHQ1	100	76.962	Microcebus_murinus
ENSCHIG00000012271	SHQ1	91	72.241	ENSMOCG00000017836	Shq1	100	82.377	Microtus_ochrogaster
ENSCHIG00000012271	SHQ1	68	60.690	ENSMMOG00000010569	shq1	66	59.950	Mola_mola
ENSCHIG00000012271	SHQ1	86	63.949	ENSMODG00000003926	SHQ1	98	63.043	Monodelphis_domestica
ENSCHIG00000012271	SHQ1	87	55.536	ENSMALG00000008870	shq1	90	55.357	Monopterus_albus
ENSCHIG00000012271	SHQ1	82	82.377	MGP_CAROLIEiJ_G0028689	Shq1	100	82.377	Mus_caroli
ENSCHIG00000012271	SHQ1	91	73.276	ENSMUSG00000035378	Shq1	100	81.967	Mus_musculus
ENSCHIG00000012271	SHQ1	91	75.172	MGP_PahariEiJ_G0022440	Shq1	100	82.787	Mus_pahari
ENSCHIG00000012271	SHQ1	91	73.966	MGP_SPRETEiJ_G0029717	Shq1	100	81.148	Mus_spretus
ENSCHIG00000012271	SHQ1	91	82.556	ENSMPUG00000017006	SHQ1	98	82.556	Mustela_putorius_furo
ENSCHIG00000012271	SHQ1	82	75.479	ENSMLUG00000013539	SHQ1	98	75.479	Myotis_lucifugus
ENSCHIG00000012271	SHQ1	89	67.257	ENSNGAG00000023317	Shq1	99	66.197	Nannospalax_galili
ENSCHIG00000012271	SHQ1	74	51.452	ENSNBRG00000024004	shq1	93	50.202	Neolamprologus_brichardi
ENSCHIG00000012271	SHQ1	91	81.411	ENSNLEG00000002731	SHQ1	100	80.207	Nomascus_leucogenys
ENSCHIG00000012271	SHQ1	76	65.741	ENSMEUG00000009350	-	89	65.741	Notamacropus_eugenii
ENSCHIG00000012271	SHQ1	89	73.592	ENSODEG00000009192	SHQ1	97	85.417	Octodon_degus
ENSCHIG00000012271	SHQ1	69	60.811	ENSONIG00000020264	shq1	94	52.226	Oreochromis_niloticus
ENSCHIG00000012271	SHQ1	90	76.581	ENSOCUG00000016695	SHQ1	99	75.643	Oryctolagus_cuniculus
ENSCHIG00000012271	SHQ1	68	60.185	ENSORLG00000023538	shq1	80	58.613	Oryzias_latipes
ENSCHIG00000012271	SHQ1	68	60.648	ENSORLG00020003697	shq1	79	59.060	Oryzias_latipes_hni
ENSCHIG00000012271	SHQ1	71	59.513	ENSORLG00015021040	shq1	80	58.613	Oryzias_latipes_hsok
ENSCHIG00000012271	SHQ1	68	61.111	ENSOMEG00000001225	shq1	70	61.558	Oryzias_melastigma
ENSCHIG00000012271	SHQ1	89	80.174	ENSOGAG00000003898	SHQ1	100	80.174	Otolemur_garnettii
ENSCHIG00000012271	SHQ1	91	97.945	ENSOARG00000009547	SHQ1	100	97.945	Ovis_aries
ENSCHIG00000012271	SHQ1	91	81.239	ENSPPAG00000027714	SHQ1	100	78.830	Pan_paniscus
ENSCHIG00000012271	SHQ1	90	60.481	ENSPPAG00000043263	-	99	57.751	Pan_paniscus
ENSCHIG00000012271	SHQ1	91	82.038	ENSPPRG00000004769	SHQ1	100	82.038	Panthera_pardus
ENSCHIG00000012271	SHQ1	91	78.066	ENSPTIG00000011478	SHQ1	100	78.066	Panthera_tigris_altaica
ENSCHIG00000012271	SHQ1	90	59.622	ENSPTRG00000048303	-	99	56.899	Pan_troglodytes
ENSCHIG00000012271	SHQ1	91	81.239	ENSPTRG00000015106	SHQ1	100	78.830	Pan_troglodytes
ENSCHIG00000012271	SHQ1	91	79.690	ENSPANG00000002881	SHQ1	100	79.346	Papio_anubis
ENSCHIG00000012271	SHQ1	84	50.000	ENSPKIG00000021517	shq1	93	47.931	Paramormyrops_kingsleyae
ENSCHIG00000012271	SHQ1	89	64.098	ENSPSIG00000005536	SHQ1	93	64.049	Pelodiscus_sinensis
ENSCHIG00000012271	SHQ1	69	59.681	ENSPMGG00000008838	shq1	73	59.681	Periophthalmus_magnuspinnatus
ENSCHIG00000012271	SHQ1	91	75.517	ENSPEMG00000000251	Shq1	100	84.426	Peromyscus_maniculatus_bairdii
ENSCHIG00000012271	SHQ1	69	56.484	ENSPMAG00000005372	shq1	100	56.703	Petromyzon_marinus
ENSCHIG00000012271	SHQ1	68	59.453	ENSPFOG00000003118	shq1	72	60.100	Poecilia_formosa
ENSCHIG00000012271	SHQ1	54	56.897	ENSPMEG00000011076	shq1	67	57.419	Poecilia_mexicana
ENSCHIG00000012271	SHQ1	62	55.637	ENSPREG00000000591	shq1	96	48.237	Poecilia_reticulata
ENSCHIG00000012271	SHQ1	91	81.067	ENSPPYG00000013717	SHQ1	100	79.002	Pongo_abelii
ENSCHIG00000012271	SHQ1	87	80.036	ENSPCAG00000009035	SHQ1	99	78.873	Procavia_capensis
ENSCHIG00000012271	SHQ1	91	77.986	ENSPCOG00000008415	SHQ1	100	78.498	Propithecus_coquereli
ENSCHIG00000012271	SHQ1	91	82.902	ENSPVAG00000017392	SHQ1	100	82.902	Pteropus_vampyrus
ENSCHIG00000012271	SHQ1	69	60.811	ENSPNYG00000003878	shq1	94	52.405	Pundamilia_nyererei
ENSCHIG00000012271	SHQ1	68	59.908	ENSPNAG00000026840	shq1	91	50.422	Pygocentrus_nattereri
ENSCHIG00000012271	SHQ1	91	70.752	ENSRNOG00000005433	Shq1	100	70.888	Rattus_norvegicus
ENSCHIG00000012271	SHQ1	90	77.123	ENSRBIG00000026280	SHQ1	100	75.563	Rhinopithecus_bieti
ENSCHIG00000012271	SHQ1	90	81.250	ENSRROG00000034126	SHQ1	100	79.167	Rhinopithecus_roxellana
ENSCHIG00000012271	SHQ1	90	72.193	ENSSBOG00000021038	SHQ1	99	71.503	Saimiri_boliviensis_boliviensis
ENSCHIG00000012271	SHQ1	87	64.632	ENSSHAG00000015077	SHQ1	98	64.991	Sarcophilus_harrisii
ENSCHIG00000012271	SHQ1	68	64.828	ENSSFOG00015016241	shq1	91	55.062	Scleropages_formosus
ENSCHIG00000012271	SHQ1	69	62.980	ENSSMAG00000016151	shq1	92	54.017	Scophthalmus_maximus
ENSCHIG00000012271	SHQ1	65	63.942	ENSSDUG00000011986	shq1	93	53.469	Seriola_dumerili
ENSCHIG00000012271	SHQ1	65	63.043	ENSSLDG00000013908	shq1	93	53.754	Seriola_lalandi_dorsalis
ENSCHIG00000012271	SHQ1	91	65.285	ENSSARG00000007119	SHQ1	100	63.040	Sorex_araneus
ENSCHIG00000012271	SHQ1	75	62.603	ENSSPUG00000011526	-	90	62.603	Sphenodon_punctatus
ENSCHIG00000012271	SHQ1	91	83.592	ENSSSCG00000011518	SHQ1	100	83.592	Sus_scrofa
ENSCHIG00000012271	SHQ1	87	62.567	ENSTGUG00000009933	SHQ1	96	62.210	Taeniopygia_guttata
ENSCHIG00000012271	SHQ1	65	58.134	ENSTRUG00000009446	shq1	97	49.066	Takifugu_rubripes
ENSCHIG00000012271	SHQ1	65	57.933	ENSTNIG00000007354	shq1	98	57.206	Tetraodon_nigroviridis
ENSCHIG00000012271	SHQ1	63	100.000	ENSTBEG00000011295	SHQ1	80	100.000	Tupaia_belangeri
ENSCHIG00000012271	SHQ1	91	87.565	ENSTTRG00000005320	SHQ1	100	87.565	Tursiops_truncatus
ENSCHIG00000012271	SHQ1	89	80.844	ENSUMAG00000024031	SHQ1	98	80.844	Ursus_maritimus
ENSCHIG00000012271	SHQ1	83	76.128	ENSVPAG00000004880	SHQ1	100	76.504	Vicugna_pacos
ENSCHIG00000012271	SHQ1	91	82.556	ENSVVUG00000013906	SHQ1	99	82.556	Vulpes_vulpes
ENSCHIG00000012271	SHQ1	68	65.446	ENSXETG00000032215	shq1	71	65.446	Xenopus_tropicalis