EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000012407 (Gene tree)
Gene ID: 102180940
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 62872 bases
Position: chr8:39520992-39583863
Accession: 102180940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000009598	RTC	PF01137.21	1.7e-60	1	1
ENSCHIP00000009598	RTC_insert	PF05189.13	2.7e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000017371	RCL1-201	1377	XM_005683699	ENSCHIP00000009598	373 (aa)	XP_005683756	UPI0003AFC64A

Gene Model

Click here to download ENSCHIG00000012407's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000012407's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000012407	RCL1	100	96.515	ENSG00000120158	RCL1	100	96.515	Homo_sapiens
ENSCHIG00000012407	RCL1	100	78.877	ENSAPOG00000015666	rcl1	100	78.877	Acanthochromis_polyacanthus
ENSCHIG00000012407	RCL1	100	95.979	ENSAMEG00000002631	RCL1	100	95.979	Ailuropoda_melanoleuca
ENSCHIG00000012407	RCL1	99	78.919	ENSACIG00000021195	rcl1	99	78.919	Amphilophus_citrinellus
ENSCHIG00000012407	RCL1	100	78.075	ENSAOCG00000002223	rcl1	100	78.075	Amphiprion_ocellaris
ENSCHIG00000012407	RCL1	100	78.342	ENSAPEG00000006905	rcl1	100	78.342	Amphiprion_percula
ENSCHIG00000012407	RCL1	99	76.486	ENSATEG00000020026	rcl1	99	76.486	Anabas_testudineus
ENSCHIG00000012407	RCL1	88	86.280	ENSAPLG00000006031	RCL1	100	86.280	Anas_platyrhynchos
ENSCHIG00000012407	RCL1	100	86.059	ENSACAG00000003640	RCL1	100	86.059	Anolis_carolinensis
ENSCHIG00000012407	RCL1	100	95.710	ENSANAG00000037372	RCL1	100	95.710	Aotus_nancymaae
ENSCHIG00000012407	RCL1	99	78.649	ENSACLG00000021724	rcl1	99	78.649	Astatotilapia_calliptera
ENSCHIG00000012407	RCL1	98	78.533	ENSAMXG00000033394	rcl1	99	78.533	Astyanax_mexicanus
ENSCHIG00000012407	RCL1	99	46.809	WBGene00022852	ZK1127.5	99	46.809	Caenorhabditis_elegans
ENSCHIG00000012407	RCL1	100	96.247	ENSCJAG00000011202	RCL1	100	96.247	Callithrix_jacchus
ENSCHIG00000012407	RCL1	100	96.247	ENSCAFG00000002091	RCL1	100	96.247	Canis_familiaris
ENSCHIG00000012407	RCL1	100	96.247	ENSCAFG00020000638	RCL1	78	96.247	Canis_lupus_dingo
ENSCHIG00000012407	RCL1	88	95.719	ENSTSYG00000009592	RCL1	97	96.133	Carlito_syrichta
ENSCHIG00000012407	RCL1	68	78.613	ENSCAPG00000013575	RCL1	100	78.613	Cavia_aperea
ENSCHIG00000012407	RCL1	100	95.442	ENSCPOG00000015354	RCL1	100	95.442	Cavia_porcellus
ENSCHIG00000012407	RCL1	100	96.247	ENSCCAG00000033505	RCL1	100	96.247	Cebus_capucinus
ENSCHIG00000012407	RCL1	100	95.979	ENSCATG00000034721	RCL1	100	95.979	Cercocebus_atys
ENSCHIG00000012407	RCL1	100	95.174	ENSCLAG00000007445	RCL1	100	95.174	Chinchilla_lanigera
ENSCHIG00000012407	RCL1	100	95.979	ENSCSAG00000008811	RCL1	100	95.979	Chlorocebus_sabaeus
ENSCHIG00000012407	RCL1	87	80.495	ENSCHOG00000007216	RCL1	100	80.495	Choloepus_hoffmanni
ENSCHIG00000012407	RCL1	100	89.276	ENSCPBG00000025481	RCL1	94	89.362	Chrysemys_picta_bellii
ENSCHIG00000012407	RCL1	98	57.838	ENSCING00000019565	-	98	57.838	Ciona_intestinalis
ENSCHIG00000012407	RCL1	100	96.247	ENSCANG00000027099	RCL1	100	96.247	Colobus_angolensis_palliatus
ENSCHIG00000012407	RCL1	100	94.102	ENSCGRG00001013748	Rcl1	100	94.102	Cricetulus_griseus_chok1gshd
ENSCHIG00000012407	RCL1	88	93.902	ENSCGRG00000005843	Rcl1	99	93.902	Cricetulus_griseus_crigri
ENSCHIG00000012407	RCL1	99	78.919	ENSCSEG00000000712	rcl1	97	78.919	Cynoglossus_semilaevis
ENSCHIG00000012407	RCL1	99	80.270	ENSCVAG00000011536	rcl1	99	80.270	Cyprinodon_variegatus
ENSCHIG00000012407	RCL1	98	76.022	ENSDARG00000038312	rcl1	100	76.022	Danio_rerio
ENSCHIG00000012407	RCL1	71	96.604	ENSDNOG00000019911	RCL1	100	96.604	Dasypus_novemcinctus
ENSCHIG00000012407	RCL1	100	94.370	ENSDORG00000015645	Rcl1	100	94.370	Dipodomys_ordii
ENSCHIG00000012407	RCL1	99	54.762	FBgn0020909	Rtc1	98	54.762	Drosophila_melanogaster
ENSCHIG00000012407	RCL1	72	95.652	ENSETEG00000014087	-	82	95.652	Echinops_telfairi
ENSCHIG00000012407	RCL1	98	55.163	ENSEBUG00000016621	-	100	54.400	Eptatretus_burgeri
ENSCHIG00000012407	RCL1	100	96.515	ENSEASG00005010653	RCL1	100	96.515	Equus_asinus_asinus
ENSCHIG00000012407	RCL1	100	96.515	ENSECAG00000015973	RCL1	100	96.515	Equus_caballus
ENSCHIG00000012407	RCL1	100	82.038	ENSEEUG00000009801	RCL1	100	82.038	Erinaceus_europaeus
ENSCHIG00000012407	RCL1	100	74.866	ENSELUG00000007353	rcl1	100	74.866	Esox_lucius
ENSCHIG00000012407	RCL1	100	94.102	ENSFCAG00000014557	RCL1	100	94.102	Felis_catus
ENSCHIG00000012407	RCL1	95	81.972	ENSFALG00000010553	RCL1	94	81.972	Ficedula_albicollis
ENSCHIG00000012407	RCL1	88	94.190	ENSFDAG00000004209	RCL1	100	94.190	Fukomys_damarensis
ENSCHIG00000012407	RCL1	99	79.730	ENSFHEG00000011228	rcl1	99	79.730	Fundulus_heteroclitus
ENSCHIG00000012407	RCL1	99	77.297	ENSGMOG00000004677	rcl1	99	77.568	Gadus_morhua
ENSCHIG00000012407	RCL1	99	85.637	ENSGALG00000015024	RCL1	99	85.637	Gallus_gallus
ENSCHIG00000012407	RCL1	99	78.108	ENSGAFG00000007257	rcl1	99	78.108	Gambusia_affinis
ENSCHIG00000012407	RCL1	100	77.540	ENSGACG00000017474	rcl1	100	77.540	Gasterosteus_aculeatus
ENSCHIG00000012407	RCL1	100	89.276	ENSGAGG00000003689	RCL1	100	89.276	Gopherus_agassizii
ENSCHIG00000012407	RCL1	100	95.979	ENSGGOG00000015041	RCL1	100	95.979	Gorilla_gorilla
ENSCHIG00000012407	RCL1	99	78.919	ENSHBUG00000001393	rcl1	99	78.919	Haplochromis_burtoni
ENSCHIG00000012407	RCL1	100	79.625	ENSHGLG00000005368	-	100	79.088	Heterocephalus_glaber_female
ENSCHIG00000012407	RCL1	100	94.638	ENSHGLG00000016452	RCL1	100	94.638	Heterocephalus_glaber_female
ENSCHIG00000012407	RCL1	100	87.668	ENSHGLG00100008718	-	100	87.668	Heterocephalus_glaber_male
ENSCHIG00000012407	RCL1	100	80.429	ENSHGLG00100018010	-	100	79.893	Heterocephalus_glaber_male
ENSCHIG00000012407	RCL1	99	77.568	ENSHCOG00000020170	rcl1	99	77.568	Hippocampus_comes
ENSCHIG00000012407	RCL1	98	79.620	ENSIPUG00000018054	RCL1	99	79.620	Ictalurus_punctatus
ENSCHIG00000012407	RCL1	100	95.710	ENSSTOG00000000023	RCL1	100	95.710	Ictidomys_tridecemlineatus
ENSCHIG00000012407	RCL1	100	94.638	ENSJJAG00000022803	-	100	94.638	Jaculus_jaculus
ENSCHIG00000012407	RCL1	54	71.144	ENSJJAG00000000764	-	95	71.134	Jaculus_jaculus
ENSCHIG00000012407	RCL1	100	83.914	ENSJJAG00000015632	-	100	83.914	Jaculus_jaculus
ENSCHIG00000012407	RCL1	98	77.929	ENSKMAG00000011946	rcl1	99	77.929	Kryptolebias_marmoratus
ENSCHIG00000012407	RCL1	99	75.676	ENSLBEG00000003957	rcl1	99	75.676	Labrus_bergylta
ENSCHIG00000012407	RCL1	91	79.351	ENSLACG00000004594	RCL1	98	83.281	Latimeria_chalumnae
ENSCHIG00000012407	RCL1	100	80.697	ENSLOCG00000010148	rcl1	98	80.697	Lepisosteus_oculatus
ENSCHIG00000012407	RCL1	100	93.298	ENSLAFG00000017495	RCL1	100	93.298	Loxodonta_africana
ENSCHIG00000012407	RCL1	100	95.979	ENSMFAG00000037906	RCL1	100	95.979	Macaca_fascicularis
ENSCHIG00000012407	RCL1	100	95.979	ENSMNEG00000012288	RCL1	100	95.979	Macaca_nemestrina
ENSCHIG00000012407	RCL1	100	95.979	ENSMLEG00000043088	RCL1	100	95.979	Mandrillus_leucophaeus
ENSCHIG00000012407	RCL1	99	78.919	ENSMAMG00000008311	rcl1	99	78.919	Mastacembelus_armatus
ENSCHIG00000012407	RCL1	99	78.649	ENSMZEG00005017292	rcl1	99	78.649	Maylandia_zebra
ENSCHIG00000012407	RCL1	58	82.648	ENSMGAG00000002245	RCL1	97	82.547	Meleagris_gallopavo
ENSCHIG00000012407	RCL1	58	93.953	ENSMAUG00000008922	Rcl1	97	93.750	Mesocricetus_auratus
ENSCHIG00000012407	RCL1	100	94.638	ENSMICG00000015562	RCL1	100	94.638	Microcebus_murinus
ENSCHIG00000012407	RCL1	100	94.906	ENSMOCG00000012145	Rcl1	100	94.906	Microtus_ochrogaster
ENSCHIG00000012407	RCL1	99	76.011	ENSMMOG00000021264	rcl1	99	76.011	Mola_mola
ENSCHIG00000012407	RCL1	95	92.394	ENSMODG00000015377	RCL1	94	92.394	Monodelphis_domestica
ENSCHIG00000012407	RCL1	99	77.297	ENSMALG00000018618	rcl1	99	77.297	Monopterus_albus
ENSCHIG00000012407	RCL1	100	94.370	MGP_CAROLIEiJ_G0022853	Rcl1	100	94.370	Mus_caroli
ENSCHIG00000012407	RCL1	100	94.370	ENSMUSG00000024785	Rcl1	100	94.370	Mus_musculus
ENSCHIG00000012407	RCL1	100	94.370	MGP_PahariEiJ_G0014346	Rcl1	100	95.294	Mus_pahari
ENSCHIG00000012407	RCL1	100	93.566	MGP_SPRETEiJ_G0023771	Rcl1	100	94.706	Mus_spretus
ENSCHIG00000012407	RCL1	100	94.906	ENSMPUG00000004998	RCL1	100	94.906	Mustela_putorius_furo
ENSCHIG00000012407	RCL1	100	94.906	ENSMLUG00000009654	RCL1	100	94.906	Myotis_lucifugus
ENSCHIG00000012407	RCL1	100	94.906	ENSNGAG00000015327	Rcl1	100	94.906	Nannospalax_galili
ENSCHIG00000012407	RCL1	90	77.448	ENSNBRG00000019854	rcl1	96	74.022	Neolamprologus_brichardi
ENSCHIG00000012407	RCL1	100	93.298	ENSNLEG00000008891	RCL1	100	93.298	Nomascus_leucogenys
ENSCHIG00000012407	RCL1	100	86.595	ENSMEUG00000007653	RCL1	100	86.595	Notamacropus_eugenii
ENSCHIG00000012407	RCL1	100	94.638	ENSOPRG00000010965	RCL1	100	94.638	Ochotona_princeps
ENSCHIG00000012407	RCL1	88	78.313	ENSODEG00000004151	RCL1	96	79.268	Octodon_degus
ENSCHIG00000012407	RCL1	99	78.919	ENSONIG00000003871	rcl1	99	78.919	Oreochromis_niloticus
ENSCHIG00000012407	RCL1	67	86.561	ENSOANG00000013193	-	100	86.561	Ornithorhynchus_anatinus
ENSCHIG00000012407	RCL1	100	95.710	ENSOCUG00000008161	RCL1	100	95.710	Oryctolagus_cuniculus
ENSCHIG00000012407	RCL1	100	76.203	ENSORLG00000010443	rcl1	100	76.203	Oryzias_latipes
ENSCHIG00000012407	RCL1	100	76.203	ENSORLG00020012211	rcl1	100	76.203	Oryzias_latipes_hni
ENSCHIG00000012407	RCL1	100	75.936	ENSORLG00015001122	rcl1	100	75.936	Oryzias_latipes_hsok
ENSCHIG00000012407	RCL1	100	77.540	ENSOMEG00000022976	rcl1	88	77.540	Oryzias_melastigma
ENSCHIG00000012407	RCL1	100	93.834	ENSOGAG00000007480	RCL1	100	93.834	Otolemur_garnettii
ENSCHIG00000012407	RCL1	100	99.732	ENSOARG00000013463	RCL1	100	99.732	Ovis_aries
ENSCHIG00000012407	RCL1	100	96.247	ENSPPAG00000037958	RCL1	100	96.247	Pan_paniscus
ENSCHIG00000012407	RCL1	100	93.298	ENSPPRG00000022645	RCL1	100	93.298	Panthera_pardus
ENSCHIG00000012407	RCL1	87	94.172	ENSPTIG00000019031	RCL1	97	92.308	Panthera_tigris_altaica
ENSCHIG00000012407	RCL1	100	95.979	ENSPTRG00000020743	RCL1	100	95.979	Pan_troglodytes
ENSCHIG00000012407	RCL1	100	95.979	ENSPANG00000025151	RCL1	100	95.979	Papio_anubis
ENSCHIG00000012407	RCL1	100	78.342	ENSPKIG00000021022	rcl1	100	78.342	Paramormyrops_kingsleyae
ENSCHIG00000012407	RCL1	88	89.634	ENSPSIG00000012302	RCL1	100	89.634	Pelodiscus_sinensis
ENSCHIG00000012407	RCL1	100	76.471	ENSPMGG00000024007	rcl1	100	76.471	Periophthalmus_magnuspinnatus
ENSCHIG00000012407	RCL1	100	94.638	ENSPEMG00000023275	Rcl1	100	94.638	Peromyscus_maniculatus_bairdii
ENSCHIG00000012407	RCL1	97	30.411	ENSPMAG00000009110	rtca	96	30.411	Petromyzon_marinus
ENSCHIG00000012407	RCL1	100	92.761	ENSPCIG00000000188	RCL1	100	92.761	Phascolarctos_cinereus
ENSCHIG00000012407	RCL1	99	78.919	ENSPFOG00000019682	rcl1	99	78.919	Poecilia_formosa
ENSCHIG00000012407	RCL1	99	78.919	ENSPLAG00000022354	rcl1	99	78.919	Poecilia_latipinna
ENSCHIG00000012407	RCL1	99	78.919	ENSPMEG00000008131	rcl1	99	78.919	Poecilia_mexicana
ENSCHIG00000012407	RCL1	99	78.649	ENSPREG00000008032	rcl1	99	78.649	Poecilia_reticulata
ENSCHIG00000012407	RCL1	100	96.783	ENSPPYG00000019244	RCL1	100	96.783	Pongo_abelii
ENSCHIG00000012407	RCL1	100	84.718	ENSPCAG00000001440	RCL1	100	84.718	Procavia_capensis
ENSCHIG00000012407	RCL1	100	95.979	ENSPCOG00000009611	RCL1	100	95.979	Propithecus_coquereli
ENSCHIG00000012407	RCL1	100	96.247	ENSPVAG00000015752	RCL1	100	96.247	Pteropus_vampyrus
ENSCHIG00000012407	RCL1	99	78.649	ENSPNYG00000012910	rcl1	99	78.649	Pundamilia_nyererei
ENSCHIG00000012407	RCL1	99	78.016	ENSPNAG00000028307	rcl1	92	78.016	Pygocentrus_nattereri
ENSCHIG00000012407	RCL1	100	94.102	ENSRNOG00000015491	Rcl1	100	94.102	Rattus_norvegicus
ENSCHIG00000012407	RCL1	100	95.979	ENSRBIG00000035818	RCL1	100	95.979	Rhinopithecus_bieti
ENSCHIG00000012407	RCL1	100	95.979	ENSRROG00000029781	RCL1	100	95.979	Rhinopithecus_roxellana
ENSCHIG00000012407	RCL1	98	38.043	YOL010W	-	97	38.043	Saccharomyces_cerevisiae
ENSCHIG00000012407	RCL1	100	96.247	ENSSBOG00000026369	RCL1	100	96.247	Saimiri_boliviensis_boliviensis
ENSCHIG00000012407	RCL1	88	91.818	ENSSHAG00000014086	RCL1	100	91.818	Sarcophilus_harrisii
ENSCHIG00000012407	RCL1	100	77.807	ENSSFOG00015023020	rcl1	100	77.807	Scleropages_formosus
ENSCHIG00000012407	RCL1	99	78.378	ENSSMAG00000019751	rcl1	85	78.378	Scophthalmus_maximus
ENSCHIG00000012407	RCL1	100	77.807	ENSSDUG00000006349	rcl1	100	77.807	Seriola_dumerili
ENSCHIG00000012407	RCL1	100	78.075	ENSSLDG00000022076	rcl1	100	78.075	Seriola_lalandi_dorsalis
ENSCHIG00000012407	RCL1	100	94.102	ENSSARG00000009260	RCL1	100	94.102	Sorex_araneus
ENSCHIG00000012407	RCL1	100	87.668	ENSSPUG00000016330	RCL1	100	87.668	Sphenodon_punctatus
ENSCHIG00000012407	RCL1	100	79.947	ENSSPAG00000018038	rcl1	100	79.947	Stegastes_partitus
ENSCHIG00000012407	RCL1	100	96.247	ENSSSCG00000005217	RCL1	83	96.247	Sus_scrofa
ENSCHIG00000012407	RCL1	100	84.267	ENSTGUG00000005138	RCL1	100	84.267	Taeniopygia_guttata
ENSCHIG00000012407	RCL1	99	78.919	ENSTRUG00000010493	rcl1	99	78.919	Takifugu_rubripes
ENSCHIG00000012407	RCL1	99	77.778	ENSTNIG00000013214	rcl1	99	77.778	Tetraodon_nigroviridis
ENSCHIG00000012407	RCL1	100	89.812	ENSTBEG00000016339	RCL1	100	89.812	Tupaia_belangeri
ENSCHIG00000012407	RCL1	100	94.906	ENSTTRG00000016525	RCL1	100	94.906	Tursiops_truncatus
ENSCHIG00000012407	RCL1	100	95.979	ENSUAMG00000005598	RCL1	100	95.979	Ursus_americanus
ENSCHIG00000012407	RCL1	88	95.107	ENSUMAG00000017890	RCL1	97	95.107	Ursus_maritimus
ENSCHIG00000012407	RCL1	88	96.330	ENSVPAG00000009188	RCL1	100	96.330	Vicugna_pacos
ENSCHIG00000012407	RCL1	88	96.646	ENSVVUG00000007304	RCL1	89	96.646	Vulpes_vulpes
ENSCHIG00000012407	RCL1	100	74.599	ENSXETG00000000592	rcl1	100	74.599	Xenopus_tropicalis
ENSCHIG00000012407	RCL1	99	78.919	ENSXCOG00000004922	rcl1	99	78.919	Xiphophorus_couchianus
ENSCHIG00000012407	RCL1	99	78.919	ENSXMAG00000022366	RCL1	99	78.919	Xiphophorus_maculatus