EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000012484 (Gene tree)
Gene ID: 102177450
Gene Symbol: RPP38
Alias: -
Full Name: ribonuclease P/MRP subunit p38
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 849 bases
Position: chr13:29007334-29008182
Accession: 102177450
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000009703	Ribosomal_L7Ae	PF01248.26	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000017476	RPP38-201	849	XM_005687964	ENSCHIP00000009703	282 (aa)	XP_005688021	UPI0008470C3F

Gene Model

Click here to download ENSCHIG00000012484's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03008	Ribosome biogenesis in eukaryotes	KEGG
chx03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000012484's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000012484	RPP38	100	74.205	ENSG00000152464	RPP38	100	74.205	Homo_sapiens
ENSCHIG00000012484	RPP38	94	42.294	ENSAPOG00000001240	rpp38	96	41.429	Acanthochromis_polyacanthus
ENSCHIG00000012484	RPP38	100	77.660	ENSAMEG00000018832	RPP38	100	76.596	Ailuropoda_melanoleuca
ENSCHIG00000012484	RPP38	88	40.945	ENSACIG00000011592	rpp38	92	40.541	Amphilophus_citrinellus
ENSCHIG00000012484	RPP38	92	41.463	ENSAOCG00000017293	rpp38	96	41.115	Amphiprion_ocellaris
ENSCHIG00000012484	RPP38	94	42.391	ENSAPEG00000002315	rpp38	96	42.029	Amphiprion_percula
ENSCHIG00000012484	RPP38	96	44.056	ENSATEG00000000731	rpp38	98	44.128	Anabas_testudineus
ENSCHIG00000012484	RPP38	91	47.170	ENSAPLG00000002054	RPP38	97	48.029	Anas_platyrhynchos
ENSCHIG00000012484	RPP38	74	46.948	ENSACLG00000016962	rpp38	99	41.901	Astatotilapia_calliptera
ENSCHIG00000012484	RPP38	74	47.945	ENSACLG00000016958	rpp38	99	41.901	Astatotilapia_calliptera
ENSCHIG00000012484	RPP38	89	43.243	ENSAMXG00000025023	rpp38	98	44.404	Astyanax_mexicanus
ENSCHIG00000012484	RPP38	100	96.809	ENSBTAG00000007702	RPP38	100	96.809	Bos_taurus
ENSCHIG00000012484	RPP38	100	75.532	ENSCAFG00000024373	RPP38	100	74.468	Canis_familiaris
ENSCHIG00000012484	RPP38	100	75.532	ENSCAFG00020008008	RPP38	100	74.468	Canis_lupus_dingo
ENSCHIG00000012484	RPP38	100	69.014	ENSCPOG00000003981	RPP38	100	69.014	Cavia_porcellus
ENSCHIG00000012484	RPP38	100	69.366	ENSCLAG00000010194	RPP38	100	69.366	Chinchilla_lanigera
ENSCHIG00000012484	RPP38	94	75.849	ENSCSAG00000019055	RPP38	100	75.618	Chlorocebus_sabaeus
ENSCHIG00000012484	RPP38	100	74.648	ENSCHOG00000004335	RPP38	100	74.648	Choloepus_hoffmanni
ENSCHIG00000012484	RPP38	100	67.368	ENSCGRG00001001395	Rpp38	100	67.368	Cricetulus_griseus_chok1gshd
ENSCHIG00000012484	RPP38	100	67.368	ENSCGRG00000017441	Rpp38	100	67.368	Cricetulus_griseus_crigri
ENSCHIG00000012484	RPP38	88	43.243	ENSCSEG00000001721	rpp38	92	43.333	Cynoglossus_semilaevis
ENSCHIG00000012484	RPP38	87	41.923	ENSCVAG00000001676	rpp38	90	42.642	Cyprinodon_variegatus
ENSCHIG00000012484	RPP38	94	44.803	ENSDARG00000040350	rpp38	96	45.455	Danio_rerio
ENSCHIG00000012484	RPP38	100	72.792	ENSDNOG00000040314	RPP38	100	72.792	Dasypus_novemcinctus
ENSCHIG00000012484	RPP38	100	65.493	ENSDORG00000009783	Rpp38	100	65.493	Dipodomys_ordii
ENSCHIG00000012484	RPP38	100	69.014	ENSETEG00000002839	RPP38	100	69.014	Echinops_telfairi
ENSCHIG00000012484	RPP38	99	78.058	ENSEASG00005019783	RPP38	98	78.058	Equus_asinus_asinus
ENSCHIG00000012484	RPP38	100	73.050	ENSEEUG00000014677	RPP38	100	73.050	Erinaceus_europaeus
ENSCHIG00000012484	RPP38	88	47.445	ENSELUG00000010160	rpp38	95	47.535	Esox_lucius
ENSCHIG00000012484	RPP38	100	74.468	ENSFCAG00000022449	RPP38	100	73.759	Felis_catus
ENSCHIG00000012484	RPP38	91	51.515	ENSFALG00000014804	RPP38	95	50.360	Ficedula_albicollis
ENSCHIG00000012484	RPP38	100	71.831	ENSFDAG00000018669	RPP38	100	71.831	Fukomys_damarensis
ENSCHIG00000012484	RPP38	87	42.146	ENSFHEG00000013741	rpp38	93	43.431	Fundulus_heteroclitus
ENSCHIG00000012484	RPP38	92	50.379	ENSGALG00000008794	RPP38	93	49.275	Gallus_gallus
ENSCHIG00000012484	RPP38	52	50.327	ENSGACG00000009258	rpp38	88	50.340	Gasterosteus_aculeatus
ENSCHIG00000012484	RPP38	74	47.489	ENSHBUG00000010937	rpp38	97	41.367	Haplochromis_burtoni
ENSCHIG00000012484	RPP38	100	69.718	ENSHGLG00000012144	RPP38	100	69.718	Heterocephalus_glaber_female
ENSCHIG00000012484	RPP38	88	41.833	ENSIPUG00000022879	rpp38	95	42.007	Ictalurus_punctatus
ENSCHIG00000012484	RPP38	100	70.318	ENSSTOG00000025699	RPP38	98	70.318	Ictidomys_tridecemlineatus
ENSCHIG00000012484	RPP38	100	69.123	ENSJJAG00000007523	Rpp38	100	68.421	Jaculus_jaculus
ENSCHIG00000012484	RPP38	88	40.876	ENSKMAG00000003986	rpp38	89	42.045	Kryptolebias_marmoratus
ENSCHIG00000012484	RPP38	90	41.860	ENSLBEG00000006853	rpp38	92	42.412	Labrus_bergylta
ENSCHIG00000012484	RPP38	95	48.951	ENSLACG00000006502	RPP38	100	49.505	Latimeria_chalumnae
ENSCHIG00000012484	RPP38	94	45.652	ENSLOCG00000018347	rpp38	94	48.327	Lepisosteus_oculatus
ENSCHIG00000012484	RPP38	100	74.648	ENSLAFG00000000509	RPP38	100	73.592	Loxodonta_africana
ENSCHIG00000012484	RPP38	94	74.717	ENSMMUG00000007679	RPP38	100	74.558	Macaca_mulatta
ENSCHIG00000012484	RPP38	96	41.993	ENSMAMG00000012774	rpp38	96	41.577	Mastacembelus_armatus
ENSCHIG00000012484	RPP38	74	47.945	ENSMZEG00005003200	rpp38	99	41.901	Maylandia_zebra
ENSCHIG00000012484	RPP38	74	48.402	ENSMZEG00005003189	rpp38	97	42.086	Maylandia_zebra
ENSCHIG00000012484	RPP38	92	50.758	ENSMGAG00000008217	RPP38	93	49.638	Meleagris_gallopavo
ENSCHIG00000012484	RPP38	100	68.421	ENSMAUG00000003644	Rpp38	100	68.421	Mesocricetus_auratus
ENSCHIG00000012484	RPP38	100	69.825	ENSMOCG00000007020	Rpp38	100	69.123	Microtus_ochrogaster
ENSCHIG00000012484	RPP38	93	38.652	ENSMMOG00000003446	rpp38	94	38.828	Mola_mola
ENSCHIG00000012484	RPP38	95	64.945	ENSMODG00000024091	RPP38	100	64.211	Monodelphis_domestica
ENSCHIG00000012484	RPP38	89	39.924	ENSMALG00000002356	rpp38	91	40.541	Monopterus_albus
ENSCHIG00000012484	RPP38	100	68.070	MGP_CAROLIEiJ_G0023133	Rpp38	100	68.070	Mus_caroli
ENSCHIG00000012484	RPP38	100	67.719	ENSMUSG00000049950	Rpp38	100	67.719	Mus_musculus
ENSCHIG00000012484	RPP38	100	69.123	MGP_PahariEiJ_G0019193	Rpp38	100	69.123	Mus_pahari
ENSCHIG00000012484	RPP38	100	67.719	MGP_SPRETEiJ_G0024051	Rpp38	100	67.719	Mus_spretus
ENSCHIG00000012484	RPP38	99	75.000	ENSMPUG00000018523	RPP38	99	73.929	Mustela_putorius_furo
ENSCHIG00000012484	RPP38	94	76.515	ENSMLUG00000002153	RPP38	100	75.887	Myotis_lucifugus
ENSCHIG00000012484	RPP38	100	70.175	ENSNGAG00000011066	Rpp38	100	70.175	Nannospalax_galili
ENSCHIG00000012484	RPP38	73	48.416	ENSNBRG00000006994	rpp38	97	41.696	Neolamprologus_brichardi
ENSCHIG00000012484	RPP38	95	41.935	ENSONIG00000020467	rpp38	97	41.786	Oreochromis_niloticus
ENSCHIG00000012484	RPP38	94	69.173	ENSOCUG00000024367	-	100	69.014	Oryctolagus_cuniculus
ENSCHIG00000012484	RPP38	94	68.797	ENSOCUG00000022768	-	100	68.662	Oryctolagus_cuniculus
ENSCHIG00000012484	RPP38	88	45.247	ENSORLG00000009219	rpp38	93	43.182	Oryzias_latipes
ENSCHIG00000012484	RPP38	88	45.283	ENSORLG00020011503	rpp38	89	43.682	Oryzias_latipes_hni
ENSCHIG00000012484	RPP38	88	44.788	ENSORLG00015017702	rpp38	89	43.704	Oryzias_latipes_hsok
ENSCHIG00000012484	RPP38	88	46.183	ENSOMEG00000005414	rpp38	90	46.008	Oryzias_melastigma
ENSCHIG00000012484	RPP38	100	73.852	ENSOGAG00000008059	RPP38	100	73.852	Otolemur_garnettii
ENSCHIG00000012484	RPP38	100	99.291	ENSOARG00000004534	RPP38	100	99.291	Ovis_aries
ENSCHIG00000012484	RPP38	100	74.205	ENSPPAG00000041577	RPP38	91	74.205	Pan_paniscus
ENSCHIG00000012484	RPP38	100	75.177	ENSPPRG00000015329	RPP38	100	74.468	Panthera_pardus
ENSCHIG00000012484	RPP38	100	74.113	ENSPTIG00000007188	RPP38	100	73.404	Panthera_tigris_altaica
ENSCHIG00000012484	RPP38	100	73.852	ENSPTRG00000002318	RPP38	91	73.852	Pan_troglodytes
ENSCHIG00000012484	RPP38	93	47.636	ENSPKIG00000025652	rpp38	94	47.482	Paramormyrops_kingsleyae
ENSCHIG00000012484	RPP38	97	51.971	ENSPSIG00000001527	RPP38	98	52.128	Pelodiscus_sinensis
ENSCHIG00000012484	RPP38	100	70.877	ENSPEMG00000008375	Rpp38	100	70.877	Peromyscus_maniculatus_bairdii
ENSCHIG00000012484	RPP38	100	65.263	ENSPCIG00000009096	RPP38	94	63.509	Phascolarctos_cinereus
ENSCHIG00000012484	RPP38	71	42.723	ENSPFOG00000016823	rpp38	88	44.444	Poecilia_formosa
ENSCHIG00000012484	RPP38	89	42.007	ENSPLAG00000007626	rpp38	91	42.045	Poecilia_latipinna
ENSCHIG00000012484	RPP38	87	39.300	ENSPMEG00000020392	rpp38	93	40.000	Poecilia_mexicana
ENSCHIG00000012484	RPP38	89	42.007	ENSPREG00000017744	rpp38	93	42.045	Poecilia_reticulata
ENSCHIG00000012484	RPP38	100	74.912	ENSPPYG00000002113	RPP38	100	74.912	Pongo_abelii
ENSCHIG00000012484	RPP38	94	75.758	ENSPVAG00000007155	RPP38	100	76.241	Pteropus_vampyrus
ENSCHIG00000012484	RPP38	74	47.945	ENSPNYG00000004293	rpp38	97	41.727	Pundamilia_nyererei
ENSCHIG00000012484	RPP38	88	42.520	ENSPNAG00000010633	rpp38	99	42.391	Pygocentrus_nattereri
ENSCHIG00000012484	RPP38	98	67.384	ENSRNOG00000038025	Rpp38	99	66.308	Rattus_norvegicus
ENSCHIG00000012484	RPP38	100	64.561	ENSSHAG00000015529	RPP38	100	64.211	Sarcophilus_harrisii
ENSCHIG00000012484	RPP38	94	45.000	ENSSMAG00000018276	rpp38	95	44.000	Scophthalmus_maximus
ENSCHIG00000012484	RPP38	94	41.155	ENSSDUG00000001651	rpp38	98	41.993	Seriola_dumerili
ENSCHIG00000012484	RPP38	94	41.877	ENSSLDG00000014355	rpp38	98	42.553	Seriola_lalandi_dorsalis
ENSCHIG00000012484	RPP38	100	56.383	ENSSARG00000012099	RPP38	100	56.383	Sorex_araneus
ENSCHIG00000012484	RPP38	100	53.472	ENSSPUG00000005237	-	100	51.724	Sphenodon_punctatus
ENSCHIG00000012484	RPP38	96	49.638	ENSSPUG00000008560	-	97	48.561	Sphenodon_punctatus
ENSCHIG00000012484	RPP38	99	53.147	ENSSPUG00000018363	-	99	51.389	Sphenodon_punctatus
ENSCHIG00000012484	RPP38	94	40.876	ENSSPAG00000020387	rpp38	98	40.351	Stegastes_partitus
ENSCHIG00000012484	RPP38	100	78.246	ENSSSCG00000027110	RPP38	100	78.246	Sus_scrofa
ENSCHIG00000012484	RPP38	91	50.190	ENSTGUG00000001366	RPP38	98	50.181	Taeniopygia_guttata
ENSCHIG00000012484	RPP38	94	43.223	ENSTNIG00000001334	rpp38	96	43.223	Tetraodon_nigroviridis
ENSCHIG00000012484	RPP38	100	85.461	ENSTTRG00000004420	RPP38	100	85.461	Tursiops_truncatus
ENSCHIG00000012484	RPP38	100	76.950	ENSUAMG00000002618	RPP38	100	75.887	Ursus_americanus
ENSCHIG00000012484	RPP38	100	75.265	ENSUMAG00000012382	RPP38	100	75.972	Ursus_maritimus
ENSCHIG00000012484	RPP38	100	75.177	ENSVVUG00000005272	RPP38	100	74.113	Vulpes_vulpes
ENSCHIG00000012484	RPP38	92	48.327	ENSXETG00000003419	rpp38	97	48.921	Xenopus_tropicalis