EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000012665 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 2044 bases
Position: chr9:77473456-77475499
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000010029	RRM_1	PF00076.22	9.6e-25	1	2
ENSCHIP00000010029	RRM_1	PF00076.22	9.6e-25	2	2
ENSCHIP00000010023	RRM_1	PF00076.22	1e-24	1	2
ENSCHIP00000010023	RRM_1	PF00076.22	1e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000017796	-	1803	-	ENSCHIP00000010023	600 (aa)	-	UPI000D194B86
ENSCHIT00000017802	-	1758	-	ENSCHIP00000010029	585 (aa)	-	UPI000D195480

Gene Model

Click here to download ENSCHIG00000012665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000012665's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000012665	-	99	59.463	ENSCHIG00000026149	-	92	61.085
ENSCHIG00000012665	-	63	63.351	ENSCHIG00000003401	-	89	66.286
ENSCHIG00000012665	-	87	65.372	ENSCHIG00000010894	-	91	66.281
ENSCHIG00000012665	-	92	53.409	ENSCHIG00000012143	-	92	58.372
ENSCHIG00000012665	-	73	68.245	ENSCHIG00000021052	-	77	62.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000012665	-	53	45.144	ENSAPOG00000023888	ncl	52	45.299	Acanthochromis_polyacanthus
ENSCHIG00000012665	-	54	42.597	ENSACIG00000013234	ncl	57	42.939	Amphilophus_citrinellus
ENSCHIG00000012665	-	53	45.407	ENSAOCG00000003133	ncl	54	45.584	Amphiprion_ocellaris
ENSCHIG00000012665	-	53	45.407	ENSAPEG00000002769	ncl	54	45.584	Amphiprion_percula
ENSCHIG00000012665	-	70	31.250	ENSATEG00000019862	-	74	33.241	Anabas_testudineus
ENSCHIG00000012665	-	54	46.770	ENSAPLG00000012897	-	67	58.333	Anas_platyrhynchos
ENSCHIG00000012665	-	55	39.740	ENSAMXG00000001647	ncl	77	40.625	Astyanax_mexicanus
ENSCHIG00000012665	-	64	47.788	ENSCPBG00000016444	-	53	47.945	Chrysemys_picta_bellii
ENSCHIG00000012665	-	56	41.176	ENSCSEG00000015089	ncl	58	41.131	Cynoglossus_semilaevis
ENSCHIG00000012665	-	53	42.175	ENSCVAG00000012600	ncl	54	42.473	Cyprinodon_variegatus
ENSCHIG00000012665	-	52	42.857	ENSDARG00000002710	ncl	79	42.628	Danio_rerio
ENSCHIG00000012665	-	70	50.769	ENSDNOG00000040257	-	59	53.314	Dasypus_novemcinctus
ENSCHIG00000012665	-	78	50.482	ENSDNOG00000031611	-	63	56.598	Dasypus_novemcinctus
ENSCHIG00000012665	-	59	35.236	ENSEBUG00000016173	ncl	56	35.248	Eptatretus_burgeri
ENSCHIG00000012665	-	60	36.792	ENSELUG00000022826	-	75	38.663	Esox_lucius
ENSCHIG00000012665	-	54	45.897	ENSFALG00000007592	-	55	45.337	Ficedula_albicollis
ENSCHIG00000012665	-	56	39.599	ENSFHEG00000018000	ncl	60	41.026	Fundulus_heteroclitus
ENSCHIG00000012665	-	62	37.972	ENSGMOG00000001341	ncl	57	40.782	Gadus_morhua
ENSCHIG00000012665	-	54	48.843	ENSGALG00000032930	NCL	55	48.312	Gallus_gallus
ENSCHIG00000012665	-	50	42.330	ENSGAFG00000015375	ncl	50	41.129	Gambusia_affinis
ENSCHIG00000012665	-	69	36.170	ENSGACG00000008970	ncl	59	39.702	Gasterosteus_aculeatus
ENSCHIG00000012665	-	64	48.894	ENSGAGG00000013330	-	53	48.493	Gopherus_agassizii
ENSCHIG00000012665	-	54	43.536	ENSHCOG00000010234	ncl	53	42.932	Hippocampus_comes
ENSCHIG00000012665	-	54	42.453	ENSIPUG00000024556	ncl	77	43.182	Ictalurus_punctatus
ENSCHIG00000012665	-	52	31.267	ENSLBEG00000014278	-	82	31.302	Labrus_bergylta
ENSCHIG00000012665	-	57	31.463	ENSLBEG00000007915	-	61	31.549	Labrus_bergylta
ENSCHIG00000012665	-	51	42.192	ENSLBEG00000019073	ncl	52	41.880	Labrus_bergylta
ENSCHIG00000012665	-	62	38.478	ENSLACG00000009328	ncl	52	43.391	Latimeria_chalumnae
ENSCHIG00000012665	-	55	35.459	ENSLACG00000022167	-	74	36.705	Latimeria_chalumnae
ENSCHIG00000012665	-	50	41.880	ENSLOCG00000004828	ncl	53	40.909	Lepisosteus_oculatus
ENSCHIG00000012665	-	54	31.378	ENSMAMG00000003479	-	65	30.278	Mastacembelus_armatus
ENSCHIG00000012665	-	52	47.297	ENSMGAG00000008147	-	82	47.339	Meleagris_gallopavo
ENSCHIG00000012665	-	51	42.444	ENSMMOG00000008553	ncl	81	42.395	Mola_mola
ENSCHIG00000012665	-	53	53.786	ENSMODG00000002470	-	55	51.515	Monodelphis_domestica
ENSCHIG00000012665	-	53	55.438	ENSMEUG00000012335	-	52	54.366	Notamacropus_eugenii
ENSCHIG00000012665	-	50	30.769	ENSONIG00000010631	-	89	30.723	Oreochromis_niloticus
ENSCHIG00000012665	-	76	52.519	ENSOANG00000008732	-	71	55.307	Ornithorhynchus_anatinus
ENSCHIG00000012665	-	52	42.122	ENSORLG00015013815	ncl	84	42.071	Oryzias_latipes_hsok
ENSCHIG00000012665	-	54	41.927	ENSPKIG00000002604	ncl	51	41.880	Paramormyrops_kingsleyae
ENSCHIG00000012665	-	64	48.539	ENSPSIG00000002361	-	51	49.167	Pelodiscus_sinensis
ENSCHIG00000012665	-	54	41.587	ENSPMGG00000004709	ncl	79	41.613	Periophthalmus_magnuspinnatus
ENSCHIG00000012665	-	53	53.786	ENSPCIG00000003293	-	51	52.909	Phascolarctos_cinereus
ENSCHIG00000012665	-	53	45.833	ENSSFOG00015008583	ncl	56	45.205	Scleropages_formosus
ENSCHIG00000012665	-	52	30.659	ENSSFOG00015013153	-	76	30.592	Scleropages_formosus
ENSCHIG00000012665	-	55	40.874	ENSSMAG00000021241	ncl	54	40.310	Scophthalmus_maximus
ENSCHIG00000012665	-	54	44.330	ENSSDUG00000006128	ncl	79	44.160	Seriola_dumerili
ENSCHIG00000012665	-	52	31.903	ENSSDUG00000010922	-	66	32.591	Seriola_dumerili
ENSCHIG00000012665	-	52	33.512	ENSSLDG00000015784	-	61	33.520	Seriola_lalandi_dorsalis
ENSCHIG00000012665	-	53	43.832	ENSSLDG00000002012	ncl	54	44.000	Seriola_lalandi_dorsalis
ENSCHIG00000012665	-	70	80.172	ENSSARG00000010007	-	62	79.487	Sorex_araneus
ENSCHIG00000012665	-	54	47.264	ENSSPUG00000008244	-	55	46.448	Sphenodon_punctatus
ENSCHIG00000012665	-	52	42.509	ENSSPAG00000002637	ncl	78	42.606	Stegastes_partitus
ENSCHIG00000012665	-	55	32.124	ENSSPAG00000001859	-	57	31.161	Stegastes_partitus
ENSCHIG00000012665	-	62	45.057	ENSTGUG00000009782	-	56	45.584	Taeniopygia_guttata
ENSCHIG00000012665	-	51	42.897	ENSTRUG00000008185	ncl	51	42.735	Takifugu_rubripes
ENSCHIG00000012665	-	61	41.624	ENSTNIG00000012186	ncl	58	43.251	Tetraodon_nigroviridis
ENSCHIG00000012665	-	53	43.158	ENSXETG00000009517	ncl	60	43.296	Xenopus_tropicalis
ENSCHIG00000012665	-	54	37.435	ENSXCOG00000003524	ncl	83	34.316	Xiphophorus_couchianus