EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000012694 (Gene tree)
Gene ID: 106502146
Gene Symbol: -
Alias: -
Full Name: DNA dC->dU-editing enzyme APOBEC-3G
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 6425 bases
Position: chr5:109457493-109463917
Accession: 106502146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000010051	APOBEC_N	PF08210.11	7.8e-36	1	1
ENSCHIP00000010038	APOBEC_N	PF08210.11	9.9e-36	1	1
ENSCHIP00000010038	APOBEC_C	PF05240.14	1.9e-24	1	1
ENSCHIP00000010051	APOBEC_C	PF05240.14	2.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000017811	-	3689	XM_018048781	ENSCHIP00000010038	213 (aa)	XP_017904270	UPI00084656FF
ENSCHIT00000017824	-	603	-	ENSCHIP00000010051	200 (aa)	-	UPI000D18F16A

Gene Model

Click here to download ENSCHIG00000012694's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000012694's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000012694	-	90	41.081	ENSCHIG00000012409	AICDA	89	41.398
ENSCHIG00000012694	-	93	40.415	ENSCHIG00000026580	-	97	40.426
ENSCHIG00000012694	-	80	30.539	ENSCHIG00000026348	APOBEC2	70	30.539

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000012694	-	93	50.000	ENSG00000239713	APOBEC3G	97	49.479	Homo_sapiens
ENSCHIG00000012694	-	92	50.532	ENSAMEG00000010815	-	83	50.532	Ailuropoda_melanoleuca
ENSCHIG00000012694	-	93	47.568	ENSANAG00000028416	-	97	47.619	Aotus_nancymaae
ENSCHIG00000012694	-	93	48.936	ENSANAG00000031271	APOBEC3G	97	48.958	Aotus_nancymaae
ENSCHIG00000012694	-	91	47.590	ENSANAG00000027961	-	96	47.590	Aotus_nancymaae
ENSCHIG00000012694	-	90	48.128	ENSANAG00000020573	-	99	47.739	Aotus_nancymaae
ENSCHIG00000012694	-	92	78.804	ENSBTAG00000037800	-	99	78.142	Bos_taurus
ENSCHIG00000012694	-	93	48.168	ENSCJAG00000023368	APOBEC3G	97	48.168	Callithrix_jacchus
ENSCHIG00000012694	-	88	47.802	ENSCJAG00000011578	-	74	48.108	Callithrix_jacchus
ENSCHIG00000012694	-	93	49.746	ENSCAFG00000015211	-	64	49.746	Canis_familiaris
ENSCHIG00000012694	-	63	52.381	ENSCAFG00000023589	-	88	52.381	Canis_familiaris
ENSCHIG00000012694	-	98	48.223	ENSCAFG00020002661	-	84	47.475	Canis_lupus_dingo
ENSCHIG00000012694	-	94	48.205	ENSCAFG00020002641	-	84	47.475	Canis_lupus_dingo
ENSCHIG00000012694	-	90	47.059	ENSCCAG00000030928	-	96	46.734	Cebus_capucinus
ENSCHIG00000012694	-	93	43.386	ENSCCAG00000032509	-	98	43.386	Cebus_capucinus
ENSCHIG00000012694	-	90	48.148	ENSCCAG00000032232	-	91	48.168	Cebus_capucinus
ENSCHIG00000012694	-	93	48.760	ENSCCAG00000033147	-	95	44.554	Cebus_capucinus
ENSCHIG00000012694	-	93	50.625	ENSCSAG00000006376	APOBEC3G	84	50.617	Chlorocebus_sabaeus
ENSCHIG00000012694	-	93	53.061	ENSCANG00000029968	-	73	52.830	Colobus_angolensis_palliatus
ENSCHIG00000012694	-	91	33.514	ENSDNOG00000039749	-	82	35.859	Dasypus_novemcinctus
ENSCHIG00000012694	-	93	52.688	ENSEASG00005018643	-	80	54.348	Equus_asinus_asinus
ENSCHIG00000012694	-	93	54.839	ENSECAG00000032756	-	64	56.522	Equus_caballus
ENSCHIG00000012694	-	93	52.688	ENSECAG00000022371	APOBEC3Z1B	82	54.348	Equus_caballus
ENSCHIG00000012694	-	93	51.176	ENSGGOG00000013750	APOBEC3G	94	51.176	Gorilla_gorilla
ENSCHIG00000012694	-	91	43.243	ENSLAFG00000008890	-	90	43.316	Loxodonta_africana
ENSCHIG00000012694	-	90	46.448	ENSLAFG00000005275	-	99	46.774	Loxodonta_africana
ENSCHIG00000012694	-	90	44.385	ENSLAFG00000020906	-	89	44.681	Loxodonta_africana
ENSCHIG00000012694	-	93	50.267	ENSMFAG00000044711	APOBEC3G	86	50.267	Macaca_fascicularis
ENSCHIG00000012694	-	93	50.000	ENSMMUG00000039346	APOBEC3G	94	50.000	Macaca_mulatta
ENSCHIG00000012694	-	93	50.267	ENSMNEG00000038847	APOBEC3G	94	50.000	Macaca_nemestrina
ENSCHIG00000012694	-	93	50.526	ENSMLEG00000024444	APOBEC3G	93	50.526	Mandrillus_leucophaeus
ENSCHIG00000012694	-	90	46.809	ENSMICG00000043748	-	92	46.842	Microcebus_murinus
ENSCHIG00000012694	-	90	47.340	ENSMICG00000047191	-	99	47.368	Microcebus_murinus
ENSCHIG00000012694	-	90	48.901	ENSMPUG00000013235	-	93	48.901	Mustela_putorius_furo
ENSCHIG00000012694	-	79	50.394	ENSMLUG00000026771	-	70	50.394	Myotis_lucifugus
ENSCHIG00000012694	-	90	48.921	ENSMLUG00000008631	-	100	49.296	Myotis_lucifugus
ENSCHIG00000012694	-	91	45.109	ENSMLUG00000024957	-	86	44.920	Myotis_lucifugus
ENSCHIG00000012694	-	57	44.348	ENSMLUG00000022226	-	92	42.857	Myotis_lucifugus
ENSCHIG00000012694	-	90	48.062	ENSMLUG00000024853	-	99	46.763	Myotis_lucifugus
ENSCHIG00000012694	-	90	45.652	ENSMLUG00000014565	-	99	45.699	Myotis_lucifugus
ENSCHIG00000012694	-	89	44.134	ENSMLUG00000000517	-	100	44.134	Myotis_lucifugus
ENSCHIG00000012694	-	91	42.935	ENSMLUG00000023022	-	88	41.969	Myotis_lucifugus
ENSCHIG00000012694	-	91	47.486	ENSMLUG00000000977	-	94	47.486	Myotis_lucifugus
ENSCHIG00000012694	-	88	37.640	ENSMLUG00000028652	-	87	36.683	Myotis_lucifugus
ENSCHIG00000012694	-	82	44.444	ENSNLEG00000018922	-	93	44.444	Nomascus_leucogenys
ENSCHIG00000012694	-	90	45.405	ENSOPRG00000002326	-	98	45.699	Ochotona_princeps
ENSCHIG00000012694	-	83	42.391	ENSOCUG00000023532	-	70	42.391	Oryctolagus_cuniculus
ENSCHIG00000012694	-	92	46.429	ENSOGAG00000024822	-	98	46.305	Otolemur_garnettii
ENSCHIG00000012694	-	93	52.406	ENSOGAG00000032518	-	98	52.632	Otolemur_garnettii
ENSCHIG00000012694	-	91	85.326	ENSOARG00000016213	APOBEC3Z1	99	85.870	Ovis_aries
ENSCHIG00000012694	-	93	51.579	ENSPPAG00000033277	-	79	50.249	Pan_paniscus
ENSCHIG00000012694	-	93	51.075	ENSPTRG00000014387	APOBEC3G	97	50.521	Pan_troglodytes
ENSCHIG00000012694	-	90	50.000	ENSPPYG00000011833	APOBEC3G	89	49.738	Pongo_abelii
ENSCHIG00000012694	-	97	46.000	ENSPCAG00000015518	-	68	46.000	Procavia_capensis
ENSCHIG00000012694	-	63	48.031	ENSPCAG00000001848	-	91	48.438	Procavia_capensis
ENSCHIG00000012694	-	82	51.479	ENSPCOG00000016357	-	84	51.163	Propithecus_coquereli
ENSCHIG00000012694	-	90	49.727	ENSPVAG00000004045	-	94	50.000	Pteropus_vampyrus
ENSCHIG00000012694	-	93	50.000	ENSRBIG00000035436	APOBEC3G	91	50.000	Rhinopithecus_bieti
ENSCHIG00000012694	-	92	48.438	ENSSBOG00000023468	-	74	48.438	Saimiri_boliviensis_boliviensis
ENSCHIG00000012694	-	93	49.479	ENSSBOG00000021384	-	96	49.479	Saimiri_boliviensis_boliviensis
ENSCHIG00000012694	-	90	49.462	ENSSBOG00000029091	-	96	48.990	Saimiri_boliviensis_boliviensis
ENSCHIG00000012694	-	90	43.646	ENSSBOG00000025673	-	93	43.011	Saimiri_boliviensis_boliviensis
ENSCHIG00000012694	-	93	50.000	ENSSBOG00000026566	-	97	50.000	Saimiri_boliviensis_boliviensis
ENSCHIG00000012694	-	93	47.340	ENSSBOG00000018208	-	99	47.340	Saimiri_boliviensis_boliviensis
ENSCHIG00000012694	-	88	66.477	ENSTTRG00000009395	-	90	66.667	Tursiops_truncatus
ENSCHIG00000012694	-	90	49.730	ENSUMAG00000002249	-	88	48.925	Ursus_maritimus
ENSCHIG00000012694	-	90	50.270	ENSUMAG00000014447	-	94	49.733	Ursus_maritimus