EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000012864 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 216 bases
Position: chr19:18095806-18096021
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000010295	LSM	PF01423.22	9.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000018071	-	216	-	ENSCHIP00000010295	71 (aa)	-	UPI000D18D140

Gene Model

Click here to download ENSCHIG00000012864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000012864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000012864	-	100	100.000	ENSCHIG00000010334	-	89	100.000
ENSCHIG00000012864	-	100	81.690	ENSCHIG00000024198	-	83	81.690
ENSCHIG00000012864	-	54	47.368	ENSCHIG00000017139	-	56	47.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000012864	-	100	100.000	ENSG00000164167	LSM6	89	100.000	Homo_sapiens
ENSCHIG00000012864	-	100	97.183	ENSAPOG00000019832	lsm6	89	97.183	Acanthochromis_polyacanthus
ENSCHIG00000012864	-	100	100.000	ENSAMEG00000016671	LSM6	89	100.000	Ailuropoda_melanoleuca
ENSCHIG00000012864	-	100	97.183	ENSACIG00000016711	lsm6	89	97.183	Amphilophus_citrinellus
ENSCHIG00000012864	-	100	97.183	ENSAPEG00000023992	lsm6	92	95.714	Amphiprion_percula
ENSCHIG00000012864	-	100	97.183	ENSATEG00000012610	lsm6	89	97.183	Anabas_testudineus
ENSCHIG00000012864	-	96	100.000	ENSAPLG00000012594	LSM6	87	100.000	Anas_platyrhynchos
ENSCHIG00000012864	-	100	100.000	ENSACAG00000004004	LSM6	89	100.000	Anolis_carolinensis
ENSCHIG00000012864	-	100	100.000	ENSANAG00000030568	-	89	100.000	Aotus_nancymaae
ENSCHIG00000012864	-	92	90.769	ENSANAG00000021839	-	87	90.769	Aotus_nancymaae
ENSCHIG00000012864	-	100	97.183	ENSACLG00000025621	lsm6	89	97.183	Astatotilapia_calliptera
ENSCHIG00000012864	-	100	97.183	ENSAMXG00000038738	lsm6	89	97.183	Astyanax_mexicanus
ENSCHIG00000012864	-	100	100.000	ENSBTAG00000014060	LSM6	89	100.000	Bos_taurus
ENSCHIG00000012864	-	100	92.958	ENSBTAG00000052085	-	89	92.958	Bos_taurus
ENSCHIG00000012864	-	96	83.824	WBGene00003080	lsm-6	88	83.824	Caenorhabditis_elegans
ENSCHIG00000012864	-	100	100.000	ENSCJAG00000002482	LSM6	89	100.000	Callithrix_jacchus
ENSCHIG00000012864	-	100	100.000	ENSCAFG00000007738	LSM6	89	100.000	Canis_familiaris
ENSCHIG00000012864	-	100	100.000	ENSCAFG00020025902	LSM6	89	100.000	Canis_lupus_dingo
ENSCHIG00000012864	-	90	92.188	ENSTSYG00000012759	-	84	92.188	Carlito_syrichta
ENSCHIG00000012864	-	100	100.000	ENSTSYG00000026972	LSM6	89	100.000	Carlito_syrichta
ENSCHIG00000012864	-	100	100.000	ENSCAPG00000008104	LSM6	89	100.000	Cavia_aperea
ENSCHIG00000012864	-	92	96.923	ENSCAPG00000011179	-	100	96.923	Cavia_aperea
ENSCHIG00000012864	-	100	100.000	ENSCPOG00000032655	LSM6	89	100.000	Cavia_porcellus
ENSCHIG00000012864	-	100	100.000	ENSCCAG00000036437	LSM6	89	100.000	Cebus_capucinus
ENSCHIG00000012864	-	100	98.592	ENSCCAG00000020665	-	89	98.592	Cebus_capucinus
ENSCHIG00000012864	-	86	83.607	ENSCATG00000038799	-	80	83.607	Cercocebus_atys
ENSCHIG00000012864	-	100	100.000	ENSCATG00000002770	-	89	100.000	Cercocebus_atys
ENSCHIG00000012864	-	100	100.000	ENSCLAG00000005495	LSM6	89	100.000	Chinchilla_lanigera
ENSCHIG00000012864	-	100	80.282	ENSCLAG00000005685	-	100	80.282	Chinchilla_lanigera
ENSCHIG00000012864	-	100	100.000	ENSCSAG00000003421	LSM6	89	100.000	Chlorocebus_sabaeus
ENSCHIG00000012864	-	75	100.000	ENSCHOG00000003420	LSM6	84	100.000	Choloepus_hoffmanni
ENSCHIG00000012864	-	100	100.000	ENSCPBG00000027472	LSM6	75	100.000	Chrysemys_picta_bellii
ENSCHIG00000012864	-	96	97.059	ENSCING00000019152	-	83	97.059	Ciona_intestinalis
ENSCHIG00000012864	-	96	98.529	ENSCSAVG00000002065	-	83	98.529	Ciona_savignyi
ENSCHIG00000012864	-	100	100.000	ENSCANG00000006849	-	89	100.000	Colobus_angolensis_palliatus
ENSCHIG00000012864	-	86	81.967	ENSCANG00000035214	-	80	81.967	Colobus_angolensis_palliatus
ENSCHIG00000012864	-	100	100.000	ENSCANG00000041263	-	89	100.000	Colobus_angolensis_palliatus
ENSCHIG00000012864	-	100	100.000	ENSCGRG00001017142	Lsm6	89	100.000	Cricetulus_griseus_chok1gshd
ENSCHIG00000012864	-	100	100.000	ENSCGRG00000008320	Lsm6	89	100.000	Cricetulus_griseus_crigri
ENSCHIG00000012864	-	100	97.183	ENSCSEG00000000423	lsm6	89	97.183	Cynoglossus_semilaevis
ENSCHIG00000012864	-	100	97.183	ENSCVAG00000001592	lsm6	89	97.183	Cyprinodon_variegatus
ENSCHIG00000012864	-	100	97.183	ENSDARG00000036995	lsm6	89	97.183	Danio_rerio
ENSCHIG00000012864	-	100	98.592	ENSDNOG00000044848	-	89	98.592	Dasypus_novemcinctus
ENSCHIG00000012864	-	97	100.000	ENSDNOG00000040186	-	74	100.000	Dasypus_novemcinctus
ENSCHIG00000012864	-	100	100.000	ENSDORG00000000933	Lsm6	89	100.000	Dipodomys_ordii
ENSCHIG00000012864	-	96	85.294	FBgn0034564	CG9344	86	85.294	Drosophila_melanogaster
ENSCHIG00000012864	-	55	100.000	ENSETEG00000013098	LSM6	81	100.000	Echinops_telfairi
ENSCHIG00000012864	-	100	100.000	ENSEBUG00000017073	lsm6	89	100.000	Eptatretus_burgeri
ENSCHIG00000012864	-	97	100.000	ENSEASG00005001533	LSM6	72	100.000	Equus_asinus_asinus
ENSCHIG00000012864	-	100	100.000	ENSECAG00000021036	LSM6	89	100.000	Equus_caballus
ENSCHIG00000012864	-	99	68.571	ENSEEUG00000002101	LSM6	88	68.571	Erinaceus_europaeus
ENSCHIG00000012864	-	100	97.183	ENSELUG00000014301	LSM6	89	97.183	Esox_lucius
ENSCHIG00000012864	-	100	100.000	ENSFCAG00000003047	LSM6	89	100.000	Felis_catus
ENSCHIG00000012864	-	100	100.000	ENSFALG00000005509	LSM6	82	100.000	Ficedula_albicollis
ENSCHIG00000012864	-	100	87.324	ENSFDAG00000019073	-	89	87.324	Fukomys_damarensis
ENSCHIG00000012864	-	100	100.000	ENSFDAG00000020913	-	89	100.000	Fukomys_damarensis
ENSCHIG00000012864	-	100	97.183	ENSFHEG00000007948	lsm6	92	97.101	Fundulus_heteroclitus
ENSCHIG00000012864	-	100	97.183	ENSGMOG00000015550	lsm6	89	97.183	Gadus_morhua
ENSCHIG00000012864	-	100	100.000	ENSGALG00000009985	LSM6	89	100.000	Gallus_gallus
ENSCHIG00000012864	-	100	97.183	ENSGAFG00000017763	lsm6	89	97.183	Gambusia_affinis
ENSCHIG00000012864	-	100	97.183	ENSGACG00000017223	lsm6	89	97.183	Gasterosteus_aculeatus
ENSCHIG00000012864	-	100	100.000	ENSGAGG00000020980	LSM6	89	100.000	Gopherus_agassizii
ENSCHIG00000012864	-	100	100.000	ENSGGOG00000001310	LSM6	89	100.000	Gorilla_gorilla
ENSCHIG00000012864	-	100	97.183	ENSHBUG00000008618	lsm6	89	97.183	Haplochromis_burtoni
ENSCHIG00000012864	-	100	100.000	ENSHGLG00000000205	LSM6	89	100.000	Heterocephalus_glaber_female
ENSCHIG00000012864	-	100	100.000	ENSHGLG00100014341	LSM6	89	100.000	Heterocephalus_glaber_male
ENSCHIG00000012864	-	100	97.183	ENSHCOG00000005591	lsm6	89	97.183	Hippocampus_comes
ENSCHIG00000012864	-	100	95.775	ENSIPUG00000004508	lsm6	89	95.775	Ictalurus_punctatus
ENSCHIG00000012864	-	100	100.000	ENSSTOG00000002678	LSM6	89	100.000	Ictidomys_tridecemlineatus
ENSCHIG00000012864	-	99	90.000	ENSJJAG00000011211	-	88	90.000	Jaculus_jaculus
ENSCHIG00000012864	-	100	100.000	ENSJJAG00000013845	-	89	100.000	Jaculus_jaculus
ENSCHIG00000012864	-	96	76.471	ENSJJAG00000016942	-	85	76.471	Jaculus_jaculus
ENSCHIG00000012864	-	100	97.183	ENSKMAG00000004105	lsm6	89	97.183	Kryptolebias_marmoratus
ENSCHIG00000012864	-	100	97.183	ENSLBEG00000018441	lsm6	89	97.183	Labrus_bergylta
ENSCHIG00000012864	-	100	100.000	ENSLACG00000006937	LSM6	89	100.000	Latimeria_chalumnae
ENSCHIG00000012864	-	100	95.775	ENSLOCG00000017683	-	89	95.775	Lepisosteus_oculatus
ENSCHIG00000012864	-	100	97.183	ENSLOCG00000008852	lsm6	89	97.183	Lepisosteus_oculatus
ENSCHIG00000012864	-	100	100.000	ENSLAFG00000001952	LSM6	89	100.000	Loxodonta_africana
ENSCHIG00000012864	-	100	100.000	ENSMFAG00000033073	LSM6	89	100.000	Macaca_fascicularis
ENSCHIG00000012864	-	86	85.246	ENSMNEG00000040412	-	80	85.246	Macaca_nemestrina
ENSCHIG00000012864	-	100	100.000	ENSMNEG00000034820	-	89	100.000	Macaca_nemestrina
ENSCHIG00000012864	-	100	100.000	ENSMLEG00000035153	LSM6	89	100.000	Mandrillus_leucophaeus
ENSCHIG00000012864	-	100	97.183	ENSMAMG00000014029	lsm6	89	97.183	Mastacembelus_armatus
ENSCHIG00000012864	-	100	97.183	ENSMZEG00005009146	lsm6	89	97.183	Maylandia_zebra
ENSCHIG00000012864	-	100	100.000	ENSMGAG00000003802	LSM6	89	100.000	Meleagris_gallopavo
ENSCHIG00000012864	-	100	100.000	ENSMAUG00000014938	Lsm6	89	100.000	Mesocricetus_auratus
ENSCHIG00000012864	-	100	98.592	ENSMICG00000047411	-	84	98.592	Microcebus_murinus
ENSCHIG00000012864	-	100	100.000	ENSMICG00000042599	LSM6	89	100.000	Microcebus_murinus
ENSCHIG00000012864	-	100	100.000	ENSMOCG00000020049	Lsm6	89	100.000	Microtus_ochrogaster
ENSCHIG00000012864	-	100	92.958	ENSMMOG00000007379	-	90	92.958	Mola_mola
ENSCHIG00000012864	-	100	97.183	ENSMMOG00000005470	lsm6	89	97.183	Mola_mola
ENSCHIG00000012864	-	100	100.000	ENSMODG00000000526	LSM6	89	100.000	Monodelphis_domestica
ENSCHIG00000012864	-	100	97.183	ENSMALG00000002419	lsm6	89	97.183	Monopterus_albus
ENSCHIG00000012864	-	100	100.000	MGP_CAROLIEiJ_G0031245	Lsm6	89	100.000	Mus_caroli
ENSCHIG00000012864	-	100	100.000	ENSMUSG00000031683	Lsm6	89	100.000	Mus_musculus
ENSCHIG00000012864	-	100	100.000	MGP_PahariEiJ_G0022851	Lsm6	89	100.000	Mus_pahari
ENSCHIG00000012864	-	100	100.000	MGP_SPRETEiJ_G0032365	Lsm6	89	100.000	Mus_spretus
ENSCHIG00000012864	-	100	100.000	ENSMPUG00000006936	LSM6	83	100.000	Mustela_putorius_furo
ENSCHIG00000012864	-	100	100.000	ENSMLUG00000026355	LSM6	89	100.000	Myotis_lucifugus
ENSCHIG00000012864	-	100	100.000	ENSNGAG00000019116	Lsm6	89	100.000	Nannospalax_galili
ENSCHIG00000012864	-	100	97.183	ENSNBRG00000004887	lsm6	89	97.183	Neolamprologus_brichardi
ENSCHIG00000012864	-	100	100.000	ENSNLEG00000005584	LSM6	89	100.000	Nomascus_leucogenys
ENSCHIG00000012864	-	99	100.000	ENSOPRG00000011199	LSM6	89	100.000	Ochotona_princeps
ENSCHIG00000012864	-	100	98.592	ENSODEG00000019419	-	89	98.592	Octodon_degus
ENSCHIG00000012864	-	100	98.592	ENSODEG00000002307	-	89	98.592	Octodon_degus
ENSCHIG00000012864	-	100	97.183	ENSODEG00000020420	-	89	97.183	Octodon_degus
ENSCHIG00000012864	-	100	88.732	ENSODEG00000018684	-	92	88.732	Octodon_degus
ENSCHIG00000012864	-	100	97.183	ENSONIG00000010005	lsm6	89	97.183	Oreochromis_niloticus
ENSCHIG00000012864	-	97	71.014	ENSOANG00000006894	-	88	71.014	Ornithorhynchus_anatinus
ENSCHIG00000012864	-	97	71.014	ENSOANG00000006895	-	88	71.014	Ornithorhynchus_anatinus
ENSCHIG00000012864	-	100	95.775	ENSORLG00000024158	lsm6	89	95.775	Oryzias_latipes
ENSCHIG00000012864	-	100	95.775	ENSORLG00020017383	lsm6	89	95.775	Oryzias_latipes_hni
ENSCHIG00000012864	-	100	95.775	ENSORLG00015016903	lsm6	89	95.775	Oryzias_latipes_hsok
ENSCHIG00000012864	-	100	97.183	ENSOMEG00000000074	lsm6	89	97.183	Oryzias_melastigma
ENSCHIG00000012864	-	100	100.000	ENSOGAG00000026665	-	89	100.000	Otolemur_garnettii
ENSCHIG00000012864	-	100	100.000	ENSOGAG00000033153	-	89	100.000	Otolemur_garnettii
ENSCHIG00000012864	-	100	92.958	ENSOARG00000011641	-	83	92.958	Ovis_aries
ENSCHIG00000012864	-	97	100.000	ENSOARG00000008509	-	88	100.000	Ovis_aries
ENSCHIG00000012864	-	100	100.000	ENSPPAG00000037929	LSM6	89	100.000	Pan_paniscus
ENSCHIG00000012864	-	100	100.000	ENSPPRG00000012806	LSM6	89	100.000	Panthera_pardus
ENSCHIG00000012864	-	100	100.000	ENSPTIG00000019769	LSM6	89	100.000	Panthera_tigris_altaica
ENSCHIG00000012864	-	100	100.000	ENSPTRG00000016488	LSM6	89	100.000	Pan_troglodytes
ENSCHIG00000012864	-	100	100.000	ENSPANG00000006552	LSM6	89	100.000	Papio_anubis
ENSCHIG00000012864	-	100	97.183	ENSPKIG00000016176	lsm6	89	97.183	Paramormyrops_kingsleyae
ENSCHIG00000012864	-	100	100.000	ENSPSIG00000016942	LSM6	89	100.000	Pelodiscus_sinensis
ENSCHIG00000012864	-	100	97.183	ENSPMGG00000018004	lsm6	89	97.183	Periophthalmus_magnuspinnatus
ENSCHIG00000012864	-	100	100.000	ENSPEMG00000012410	Lsm6	89	100.000	Peromyscus_maniculatus_bairdii
ENSCHIG00000012864	-	100	100.000	ENSPMAG00000006949	lsm6	89	100.000	Petromyzon_marinus
ENSCHIG00000012864	-	100	100.000	ENSPCIG00000023469	LSM6	80	100.000	Phascolarctos_cinereus
ENSCHIG00000012864	-	100	97.183	ENSPFOG00000008881	lsm6	89	97.183	Poecilia_formosa
ENSCHIG00000012864	-	100	97.183	ENSPLAG00000003202	lsm6	89	97.183	Poecilia_latipinna
ENSCHIG00000012864	-	100	97.183	ENSPMEG00000004000	lsm6	89	97.183	Poecilia_mexicana
ENSCHIG00000012864	-	100	97.183	ENSPREG00000023235	lsm6	89	97.183	Poecilia_reticulata
ENSCHIG00000012864	-	100	100.000	ENSPPYG00000015105	LSM6	89	100.000	Pongo_abelii
ENSCHIG00000012864	-	100	100.000	ENSPCOG00000013899	LSM6	89	100.000	Propithecus_coquereli
ENSCHIG00000012864	-	100	97.183	ENSPNYG00000012614	lsm6	89	97.183	Pundamilia_nyererei
ENSCHIG00000012864	-	100	97.183	ENSPNAG00000018779	lsm6	89	97.183	Pygocentrus_nattereri
ENSCHIG00000012864	-	100	100.000	ENSRNOG00000030374	Lsm6	89	100.000	Rattus_norvegicus
ENSCHIG00000012864	-	100	100.000	ENSRNOG00000049370	LOC100360750	89	100.000	Rattus_norvegicus
ENSCHIG00000012864	-	100	100.000	ENSRBIG00000027878	LSM6	89	100.000	Rhinopithecus_bieti
ENSCHIG00000012864	-	100	100.000	ENSRROG00000024868	LSM6	89	100.000	Rhinopithecus_roxellana
ENSCHIG00000012864	-	99	37.838	YDR378C	-	86	41.892	Saccharomyces_cerevisiae
ENSCHIG00000012864	-	100	70.423	ENSSBOG00000028103	-	87	70.423	Saimiri_boliviensis_boliviensis
ENSCHIG00000012864	-	100	100.000	ENSSBOG00000021229	-	89	100.000	Saimiri_boliviensis_boliviensis
ENSCHIG00000012864	-	100	97.183	ENSSFOG00015016480	lsm6	89	97.183	Scleropages_formosus
ENSCHIG00000012864	-	100	97.183	ENSSMAG00000004550	lsm6	92	95.775	Scophthalmus_maximus
ENSCHIG00000012864	-	100	97.183	ENSSLDG00000020533	lsm6	74	97.183	Seriola_lalandi_dorsalis
ENSCHIG00000012864	-	97	97.101	ENSSLDG00000004136	-	59	97.101	Seriola_lalandi_dorsalis
ENSCHIG00000012864	-	55	100.000	ENSSARG00000000689	LSM6	81	100.000	Sorex_araneus
ENSCHIG00000012864	-	100	100.000	ENSSPUG00000008657	LSM6	89	100.000	Sphenodon_punctatus
ENSCHIG00000012864	-	100	97.183	ENSSPAG00000003246	lsm6	89	97.183	Stegastes_partitus
ENSCHIG00000012864	-	100	100.000	ENSSSCG00000035973	LSM6	89	100.000	Sus_scrofa
ENSCHIG00000012864	-	100	100.000	ENSTGUG00000002663	LSM6	89	100.000	Taeniopygia_guttata
ENSCHIG00000012864	-	100	97.183	ENSTRUG00000023398	lsm6	89	97.183	Takifugu_rubripes
ENSCHIG00000012864	-	100	97.183	ENSTNIG00000017725	lsm6	89	97.183	Tetraodon_nigroviridis
ENSCHIG00000012864	-	100	100.000	ENSTTRG00000004609	LSM6	89	100.000	Tursiops_truncatus
ENSCHIG00000012864	-	97	100.000	ENSUAMG00000014213	LSM6	57	100.000	Ursus_americanus
ENSCHIG00000012864	-	97	100.000	ENSUMAG00000015727	LSM6	57	100.000	Ursus_maritimus
ENSCHIG00000012864	-	100	100.000	ENSVPAG00000006922	LSM6	89	100.000	Vicugna_pacos
ENSCHIG00000012864	-	100	100.000	ENSVVUG00000009254	LSM6	61	100.000	Vulpes_vulpes
ENSCHIG00000012864	-	100	100.000	ENSXETG00000023683	lsm6	89	100.000	Xenopus_tropicalis
ENSCHIG00000012864	-	100	97.183	ENSXMAG00000009606	lsm6	90	97.101	Xiphophorus_maculatus