EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000012896 (Gene tree)
Gene ID: 102186869
Gene Symbol: APTX
Alias: AOA|AOA1|AXA1|EAOH|EOAHA|FLJ20157
Full Name: aprataxin
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 15869 bases
Position: chr8:74547223-74563091
Accession: 102186869
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000010396	DcpS_C	PF11969.8	2e-34	1	1
ENSCHIP00000010428	DcpS_C	PF11969.8	2e-34	1	1
ENSCHIP00000010411	DcpS_C	PF11969.8	2.3e-34	1	1
ENSCHIP00000010424	DcpS_C	PF11969.8	2.5e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000018175	APTX-201	2215	XM_005684045	ENSCHIP00000010396	342 (aa)	XP_005684102	UPI000846A7B9
ENSCHIT00000018207	APTX-204	1017	-	ENSCHIP00000010428	338 (aa)	-	UPI000D193023
ENSCHIT00000018190	APTX-202	1068	-	ENSCHIP00000010411	355 (aa)	-	UPI000D190801
ENSCHIT00000018203	APTX-203	1107	-	ENSCHIP00000010424	368 (aa)	-	UPI000D1910BD

Gene Model

Click here to download ENSCHIG00000012896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000012896's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000012896	APTX	100	88.889	ENSG00000137074	APTX	98	94.475	Homo_sapiens
ENSCHIG00000012896	APTX	99	58.358	ENSAPOG00000008785	aptx	100	58.358	Acanthochromis_polyacanthus
ENSCHIG00000012896	APTX	100	88.889	ENSAMEG00000007648	APTX	96	88.889	Ailuropoda_melanoleuca
ENSCHIG00000012896	APTX	99	53.779	ENSACIG00000002035	aptx	100	53.779	Amphilophus_citrinellus
ENSCHIG00000012896	APTX	99	59.238	ENSAOCG00000000634	aptx	100	59.238	Amphiprion_ocellaris
ENSCHIG00000012896	APTX	99	59.238	ENSAPEG00000017253	aptx	100	59.238	Amphiprion_percula
ENSCHIG00000012896	APTX	99	56.891	ENSATEG00000017383	aptx	100	56.891	Anabas_testudineus
ENSCHIG00000012896	APTX	90	59.317	ENSAPLG00000015645	APTX	100	59.317	Anas_platyrhynchos
ENSCHIG00000012896	APTX	99	61.696	ENSACAG00000003581	APTX	95	61.696	Anolis_carolinensis
ENSCHIG00000012896	APTX	100	88.304	ENSANAG00000030160	APTX	99	86.145	Aotus_nancymaae
ENSCHIG00000012896	APTX	99	58.824	ENSACLG00000018887	aptx	100	58.824	Astatotilapia_calliptera
ENSCHIG00000012896	APTX	99	58.187	ENSAMXG00000039899	aptx	99	58.187	Astyanax_mexicanus
ENSCHIG00000012896	APTX	100	97.368	ENSBTAG00000013947	APTX	99	97.368	Bos_taurus
ENSCHIG00000012896	APTX	100	86.842	ENSCJAG00000007940	APTX	99	86.842	Callithrix_jacchus
ENSCHIG00000012896	APTX	100	88.889	ENSCAFG00000001812	APTX	100	88.889	Canis_familiaris
ENSCHIG00000012896	APTX	100	88.889	ENSCAFG00020015598	APTX	100	88.889	Canis_lupus_dingo
ENSCHIG00000012896	APTX	100	88.012	ENSTSYG00000003041	APTX	100	88.012	Carlito_syrichta
ENSCHIG00000012896	APTX	61	92.683	ENSCAPG00000013470	APTX	100	92.683	Cavia_aperea
ENSCHIG00000012896	APTX	99	86.217	ENSCPOG00000005975	APTX	100	92.391	Cavia_porcellus
ENSCHIG00000012896	APTX	100	87.427	ENSCCAG00000036783	APTX	99	87.427	Cebus_capucinus
ENSCHIG00000012896	APTX	100	88.889	ENSCATG00000042639	APTX	97	88.889	Cercocebus_atys
ENSCHIG00000012896	APTX	100	85.673	ENSCLAG00000012185	APTX	100	90.761	Chinchilla_lanigera
ENSCHIG00000012896	APTX	100	89.181	ENSCSAG00000009885	APTX	96	89.181	Chlorocebus_sabaeus
ENSCHIG00000012896	APTX	100	65.156	ENSCPBG00000023973	APTX	98	65.722	Chrysemys_picta_bellii
ENSCHIG00000012896	APTX	97	38.997	ENSCING00000008741	-	94	38.997	Ciona_intestinalis
ENSCHIG00000012896	APTX	98	39.554	ENSCSAVG00000008038	-	97	39.833	Ciona_savignyi
ENSCHIG00000012896	APTX	100	88.012	ENSCANG00000037253	APTX	100	88.012	Colobus_angolensis_palliatus
ENSCHIG00000012896	APTX	99	84.412	ENSCGRG00001000705	Aptx	99	90.659	Cricetulus_griseus_chok1gshd
ENSCHIG00000012896	APTX	99	84.412	ENSCGRG00000014159	Aptx	99	90.659	Cricetulus_griseus_crigri
ENSCHIG00000012896	APTX	99	57.692	ENSCSEG00000009549	aptx	99	57.692	Cynoglossus_semilaevis
ENSCHIG00000012896	APTX	99	56.637	ENSCVAG00000011942	aptx	99	56.637	Cyprinodon_variegatus
ENSCHIG00000012896	APTX	99	55.917	ENSDARG00000027143	aptx	99	57.101	Danio_rerio
ENSCHIG00000012896	APTX	100	88.304	ENSDNOG00000018498	APTX	96	88.304	Dasypus_novemcinctus
ENSCHIG00000012896	APTX	100	85.423	ENSDORG00000002139	Aptx	100	90.761	Dipodomys_ordii
ENSCHIG00000012896	APTX	54	40.449	FBgn0038704	CG5316	87	47.541	Drosophila_melanogaster
ENSCHIG00000012896	APTX	81	85.971	ENSETEG00000012459	APTX	78	85.971	Echinops_telfairi
ENSCHIG00000012896	APTX	99	47.278	ENSEBUG00000013914	aptx	95	47.564	Eptatretus_burgeri
ENSCHIG00000012896	APTX	99	88.235	ENSEASG00005004566	APTX	99	88.235	Equus_asinus_asinus
ENSCHIG00000012896	APTX	99	87.647	ENSECAG00000012674	APTX	92	87.647	Equus_caballus
ENSCHIG00000012896	APTX	85	84.247	ENSEEUG00000010693	APTX	95	84.247	Erinaceus_europaeus
ENSCHIG00000012896	APTX	100	88.889	ENSFCAG00000008728	APTX	100	88.889	Felis_catus
ENSCHIG00000012896	APTX	99	63.037	ENSFALG00000001230	APTX	100	63.037	Ficedula_albicollis
ENSCHIG00000012896	APTX	100	82.749	ENSFDAG00000013752	APTX	100	90.217	Fukomys_damarensis
ENSCHIG00000012896	APTX	90	50.000	ENSFHEG00000021328	aptx	82	50.000	Fundulus_heteroclitus
ENSCHIG00000012896	APTX	99	56.047	ENSGMOG00000012505	aptx	99	56.047	Gadus_morhua
ENSCHIG00000012896	APTX	99	60.511	ENSGALG00000001954	APTX	100	60.511	Gallus_gallus
ENSCHIG00000012896	APTX	99	57.143	ENSGAFG00000005086	aptx	100	57.143	Gambusia_affinis
ENSCHIG00000012896	APTX	99	57.353	ENSGACG00000017887	aptx	99	57.353	Gasterosteus_aculeatus
ENSCHIG00000012896	APTX	99	65.625	ENSGAGG00000013230	APTX	100	66.193	Gopherus_agassizii
ENSCHIG00000012896	APTX	85	87.671	ENSGGOG00000014232	APTX	95	81.443	Gorilla_gorilla
ENSCHIG00000012896	APTX	99	58.824	ENSHBUG00000021058	aptx	100	58.824	Haplochromis_burtoni
ENSCHIG00000012896	APTX	100	83.333	ENSHGLG00000015093	APTX	100	89.130	Heterocephalus_glaber_female
ENSCHIG00000012896	APTX	100	84.211	ENSHGLG00100013482	APTX	100	89.130	Heterocephalus_glaber_male
ENSCHIG00000012896	APTX	99	56.932	ENSHCOG00000018216	aptx	96	56.932	Hippocampus_comes
ENSCHIG00000012896	APTX	99	59.064	ENSIPUG00000017548	aptx	99	59.064	Ictalurus_punctatus
ENSCHIG00000012896	APTX	99	86.804	ENSSTOG00000005185	APTX	100	90.761	Ictidomys_tridecemlineatus
ENSCHIG00000012896	APTX	99	78.299	ENSJJAG00000015653	Aptx	100	79.154	Jaculus_jaculus
ENSCHIG00000012896	APTX	99	58.140	ENSKMAG00000000117	aptx	100	58.140	Kryptolebias_marmoratus
ENSCHIG00000012896	APTX	99	58.841	ENSLBEG00000015353	aptx	99	58.841	Labrus_bergylta
ENSCHIG00000012896	APTX	99	51.541	ENSLBEG00000021489	APTX	99	51.541	Labrus_bergylta
ENSCHIG00000012896	APTX	99	59.605	ENSLACG00000003376	APTX	99	60.169	Latimeria_chalumnae
ENSCHIG00000012896	APTX	99	62.139	ENSLOCG00000011556	aptx	95	62.139	Lepisosteus_oculatus
ENSCHIG00000012896	APTX	100	88.304	ENSLAFG00000005665	APTX	99	88.304	Loxodonta_africana
ENSCHIG00000012896	APTX	99	89.443	ENSMFAG00000043141	APTX	97	89.443	Macaca_fascicularis
ENSCHIG00000012896	APTX	100	89.181	ENSMMUG00000007724	APTX	97	89.181	Macaca_mulatta
ENSCHIG00000012896	APTX	100	88.889	ENSMNEG00000042341	APTX	100	88.889	Macaca_nemestrina
ENSCHIG00000012896	APTX	100	88.596	ENSMLEG00000035137	APTX	100	88.596	Mandrillus_leucophaeus
ENSCHIG00000012896	APTX	99	56.160	ENSMAMG00000018377	aptx	100	56.160	Mastacembelus_armatus
ENSCHIG00000012896	APTX	99	58.529	ENSMZEG00005022621	aptx	100	58.529	Maylandia_zebra
ENSCHIG00000012896	APTX	54	73.481	ENSMGAG00000005736	APTX	100	73.481	Meleagris_gallopavo
ENSCHIG00000012896	APTX	99	83.728	ENSMAUG00000006039	Aptx	99	90.110	Mesocricetus_auratus
ENSCHIG00000012896	APTX	99	89.150	ENSMICG00000006603	APTX	97	89.150	Microcebus_murinus
ENSCHIG00000012896	APTX	99	82.353	ENSMOCG00000000869	Aptx	99	90.110	Microtus_ochrogaster
ENSCHIG00000012896	APTX	99	60.000	ENSMMOG00000007028	aptx	99	60.000	Mola_mola
ENSCHIG00000012896	APTX	100	62.784	ENSMODG00000003365	APTX	100	62.784	Monodelphis_domestica
ENSCHIG00000012896	APTX	99	51.917	ENSMALG00000003828	aptx	68	83.333	Monopterus_albus
ENSCHIG00000012896	APTX	81	90.659	MGP_CAROLIEiJ_G0025897	-	99	90.659	Mus_caroli
ENSCHIG00000012896	APTX	99	84.366	ENSMUSG00000028411	Aptx	99	92.308	Mus_musculus
ENSCHIG00000012896	APTX	99	84.071	MGP_PahariEiJ_G0024020	Aptx	99	84.071	Mus_pahari
ENSCHIG00000012896	APTX	99	84.118	MGP_SPRETEiJ_G0026846	Aptx	97	84.118	Mus_spretus
ENSCHIG00000012896	APTX	100	88.012	ENSMPUG00000004290	APTX	100	88.012	Mustela_putorius_furo
ENSCHIG00000012896	APTX	100	90.936	ENSMLUG00000016081	APTX	95	90.936	Myotis_lucifugus
ENSCHIG00000012896	APTX	100	83.041	ENSNGAG00000016314	Aptx	100	89.130	Nannospalax_galili
ENSCHIG00000012896	APTX	99	59.064	ENSNBRG00000014199	aptx	100	59.064	Neolamprologus_brichardi
ENSCHIG00000012896	APTX	100	88.889	ENSNLEG00000032184	APTX	100	88.889	Nomascus_leucogenys
ENSCHIG00000012896	APTX	100	62.428	ENSMEUG00000004153	APTX	99	62.428	Notamacropus_eugenii
ENSCHIG00000012896	APTX	85	80.479	ENSOPRG00000012403	APTX	95	80.479	Ochotona_princeps
ENSCHIG00000012896	APTX	100	85.673	ENSODEG00000015832	-	100	90.217	Octodon_degus
ENSCHIG00000012896	APTX	99	68.622	ENSODEG00000000097	-	100	70.393	Octodon_degus
ENSCHIG00000012896	APTX	99	58.065	ENSONIG00000014541	aptx	83	58.065	Oreochromis_niloticus
ENSCHIG00000012896	APTX	85	62.541	ENSOANG00000009878	APTX	98	62.541	Ornithorhynchus_anatinus
ENSCHIG00000012896	APTX	88	83.173	ENSOCUG00000025059	-	92	86.047	Oryctolagus_cuniculus
ENSCHIG00000012896	APTX	99	87.647	ENSOCUG00000000738	-	99	87.285	Oryctolagus_cuniculus
ENSCHIG00000012896	APTX	99	56.598	ENSORLG00000006237	aptx	100	56.598	Oryzias_latipes
ENSCHIG00000012896	APTX	99	56.609	ENSORLG00020021478	aptx	100	56.609	Oryzias_latipes_hni
ENSCHIG00000012896	APTX	99	57.895	ENSORLG00015021873	aptx	100	57.895	Oryzias_latipes_hsok
ENSCHIG00000012896	APTX	87	55.700	ENSOMEG00000007875	aptx	81	55.700	Oryzias_melastigma
ENSCHIG00000012896	APTX	100	86.550	ENSOGAG00000005388	APTX	96	86.550	Otolemur_garnettii
ENSCHIG00000012896	APTX	100	99.123	ENSOARG00000009598	APTX	96	99.123	Ovis_aries
ENSCHIG00000012896	APTX	100	88.889	ENSPPAG00000030295	APTX	97	88.889	Pan_paniscus
ENSCHIG00000012896	APTX	100	89.181	ENSPPRG00000017524	APTX	100	89.181	Panthera_pardus
ENSCHIG00000012896	APTX	100	89.181	ENSPTIG00000020000	APTX	100	89.181	Panthera_tigris_altaica
ENSCHIG00000012896	APTX	100	88.889	ENSPTRG00000020850	APTX	100	88.889	Pan_troglodytes
ENSCHIG00000012896	APTX	100	88.889	ENSPANG00000025301	APTX	97	88.889	Papio_anubis
ENSCHIG00000012896	APTX	99	59.366	ENSPKIG00000013601	aptx	99	59.366	Paramormyrops_kingsleyae
ENSCHIG00000012896	APTX	100	67.055	ENSPSIG00000010521	APTX	96	67.055	Pelodiscus_sinensis
ENSCHIG00000012896	APTX	98	56.140	ENSPMGG00000018649	aptx	99	56.140	Periophthalmus_magnuspinnatus
ENSCHIG00000012896	APTX	99	84.366	ENSPEMG00000007747	Aptx	99	90.110	Peromyscus_maniculatus_bairdii
ENSCHIG00000012896	APTX	99	47.384	ENSPMAG00000008417	aptx	99	46.176	Petromyzon_marinus
ENSCHIG00000012896	APTX	99	67.521	ENSPCIG00000029852	APTX	100	67.521	Phascolarctos_cinereus
ENSCHIG00000012896	APTX	99	57.726	ENSPFOG00000005131	-	99	57.726	Poecilia_formosa
ENSCHIG00000012896	APTX	99	57.434	ENSPFOG00000004992	aptx	100	57.434	Poecilia_formosa
ENSCHIG00000012896	APTX	99	57.726	ENSPLAG00000007960	APTX	100	57.726	Poecilia_latipinna
ENSCHIG00000012896	APTX	99	57.726	ENSPLAG00000007906	aptx	100	57.726	Poecilia_latipinna
ENSCHIG00000012896	APTX	99	58.017	ENSPMEG00000018504	aptx	100	58.017	Poecilia_mexicana
ENSCHIG00000012896	APTX	99	57.726	ENSPMEG00000019789	APTX	100	57.726	Poecilia_mexicana
ENSCHIG00000012896	APTX	99	53.372	ENSPREG00000004375	aptx	100	53.372	Poecilia_reticulata
ENSCHIG00000012896	APTX	100	89.474	ENSPPYG00000019142	APTX	96	89.474	Pongo_abelii
ENSCHIG00000012896	APTX	100	73.099	ENSPCAG00000010014	APTX	99	73.099	Procavia_capensis
ENSCHIG00000012896	APTX	100	90.643	ENSPCOG00000016780	APTX	100	90.643	Propithecus_coquereli
ENSCHIG00000012896	APTX	100	88.012	ENSPVAG00000011468	APTX	97	88.012	Pteropus_vampyrus
ENSCHIG00000012896	APTX	99	58.824	ENSPNYG00000007675	aptx	100	58.824	Pundamilia_nyererei
ENSCHIG00000012896	APTX	99	55.588	ENSPNAG00000015984	aptx	99	55.588	Pygocentrus_nattereri
ENSCHIG00000012896	APTX	99	80.826	ENSRNOG00000006582	Aptx	99	80.826	Rattus_norvegicus
ENSCHIG00000012896	APTX	100	88.304	ENSRBIG00000042913	APTX	100	88.304	Rhinopithecus_bieti
ENSCHIG00000012896	APTX	100	88.012	ENSRROG00000035395	APTX	100	88.012	Rhinopithecus_roxellana
ENSCHIG00000012896	APTX	100	88.304	ENSSBOG00000025215	APTX	100	88.304	Saimiri_boliviensis_boliviensis
ENSCHIG00000012896	APTX	100	67.251	ENSSHAG00000012205	APTX	96	67.251	Sarcophilus_harrisii
ENSCHIG00000012896	APTX	99	62.286	ENSSFOG00015009267	aptx	99	62.286	Scleropages_formosus
ENSCHIG00000012896	APTX	99	58.358	ENSSMAG00000008839	aptx	100	58.358	Scophthalmus_maximus
ENSCHIG00000012896	APTX	99	58.944	ENSSDUG00000001989	aptx	100	58.944	Seriola_dumerili
ENSCHIG00000012896	APTX	99	57.925	ENSSLDG00000004915	aptx	100	57.925	Seriola_lalandi_dorsalis
ENSCHIG00000012896	APTX	100	64.407	ENSSPUG00000008994	APTX	87	64.407	Sphenodon_punctatus
ENSCHIG00000012896	APTX	99	59.531	ENSSPAG00000020373	aptx	100	59.531	Stegastes_partitus
ENSCHIG00000012896	APTX	100	91.228	ENSSSCG00000011001	APTX	100	91.228	Sus_scrofa
ENSCHIG00000012896	APTX	100	61.383	ENSTGUG00000001441	APTX	100	61.383	Taeniopygia_guttata
ENSCHIG00000012896	APTX	99	57.522	ENSTRUG00000009794	aptx	99	57.522	Takifugu_rubripes
ENSCHIG00000012896	APTX	99	58.407	ENSTNIG00000010570	aptx	98	58.407	Tetraodon_nigroviridis
ENSCHIG00000012896	APTX	100	81.287	ENSTBEG00000008504	APTX	96	81.287	Tupaia_belangeri
ENSCHIG00000012896	APTX	93	85.849	ENSTTRG00000007384	APTX	96	85.849	Tursiops_truncatus
ENSCHIG00000012896	APTX	99	89.412	ENSUAMG00000003700	APTX	97	89.412	Ursus_americanus
ENSCHIG00000012896	APTX	99	89.412	ENSUMAG00000005837	APTX	99	89.412	Ursus_maritimus
ENSCHIG00000012896	APTX	80	86.667	ENSVPAG00000001297	APTX	80	86.957	Vicugna_pacos
ENSCHIG00000012896	APTX	100	88.889	ENSVVUG00000021130	APTX	100	88.889	Vulpes_vulpes
ENSCHIG00000012896	APTX	99	58.857	ENSXETG00000024143	aptx	99	59.710	Xenopus_tropicalis
ENSCHIG00000012896	APTX	99	56.091	ENSXCOG00000005020	aptx	100	56.091	Xiphophorus_couchianus
ENSCHIG00000012896	APTX	99	57.143	ENSXMAG00000022086	aptx	97	57.143	Xiphophorus_maculatus