EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000012897 (Gene tree)
Gene ID: 102178026
Gene Symbol: SKIV2L
Alias: 170A|DDX13|HLP|SKI2W|SKIV2|SKIV2L1
Full Name: Ski2 like RNA helicase
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 12712 bases
Position: chr23:22565516-22578227
Accession: 102178026
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000010395	rRNA_proc-arch	PF13234.6	6.3e-42	1	1
ENSCHIP00000010375	rRNA_proc-arch	PF13234.6	6.3e-42	1	1
ENSCHIP00000010375	DEAD	PF00270.29	2.6e-16	1	1
ENSCHIP00000010395	DEAD	PF00270.29	8.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000018174	SKIV2L-202	3729	-	ENSCHIP00000010395	1242 (aa)	-	UPI000D18DAE3
ENSCHIT00000018153	SKIV2L-201	6522	XM_018038700	ENSCHIP00000010375	1246 (aa)	XP_017894189	UPI000847B966

Gene Model

Click here to download ENSCHIG00000012897's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000012897's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000012897	SKIV2L	76	37.137	ENSCHIG00000024413	MTREX	88	37.137

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000012897	SKIV2L	100	94.703	ENSG00000204351	SKIV2L	100	94.703	Homo_sapiens
ENSCHIG00000012897	SKIV2L	99	61.648	ENSAPOG00000008257	skiv2l	99	61.847	Acanthochromis_polyacanthus
ENSCHIG00000012897	SKIV2L	100	95.425	ENSAMEG00000002078	SKIV2L	100	95.425	Ailuropoda_melanoleuca
ENSCHIG00000012897	SKIV2L	99	60.288	ENSACIG00000016719	skiv2l	99	60.113	Amphilophus_citrinellus
ENSCHIG00000012897	SKIV2L	99	61.190	ENSAOCG00000017352	skiv2l	99	61.285	Amphiprion_ocellaris
ENSCHIG00000012897	SKIV2L	99	61.032	ENSAPEG00000001055	skiv2l	99	61.124	Amphiprion_percula
ENSCHIG00000012897	SKIV2L	99	60.939	ENSATEG00000007601	skiv2l	99	60.915	Anabas_testudineus
ENSCHIG00000012897	SKIV2L	99	65.043	ENSACAG00000011746	SKIV2L	98	65.630	Anolis_carolinensis
ENSCHIG00000012897	SKIV2L	100	95.104	ENSANAG00000037992	SKIV2L	100	95.104	Aotus_nancymaae
ENSCHIG00000012897	SKIV2L	99	61.727	ENSACLG00000006886	skiv2l	99	61.687	Astatotilapia_calliptera
ENSCHIG00000012897	SKIV2L	98	59.568	ENSAMXG00000011517	skiv2l	99	59.552	Astyanax_mexicanus
ENSCHIG00000012897	SKIV2L	100	98.876	ENSBTAG00000005587	SKIV2L	100	98.876	Bos_taurus
ENSCHIG00000012897	SKIV2L	96	39.813	WBGene00008502	skih-2	99	39.720	Caenorhabditis_elegans
ENSCHIG00000012897	SKIV2L	100	94.703	ENSCJAG00000002263	SKIV2L	100	94.703	Callithrix_jacchus
ENSCHIG00000012897	SKIV2L	100	95.024	ENSCAFG00000000679	SKIV2L	100	95.024	Canis_familiaris
ENSCHIG00000012897	SKIV2L	100	94.944	ENSCAFG00020000948	SKIV2L	100	94.944	Canis_lupus_dingo
ENSCHIG00000012897	SKIV2L	100	94.543	ENSTSYG00000012133	SKIV2L	100	94.543	Carlito_syrichta
ENSCHIG00000012897	SKIV2L	100	92.777	ENSCPOG00000001307	SKIV2L	100	92.777	Cavia_porcellus
ENSCHIG00000012897	SKIV2L	100	95.104	ENSCCAG00000026206	SKIV2L	100	95.104	Cebus_capucinus
ENSCHIG00000012897	SKIV2L	100	94.703	ENSCATG00000036901	SKIV2L	100	94.703	Cercocebus_atys
ENSCHIG00000012897	SKIV2L	100	93.499	ENSCLAG00000007678	SKIV2L	100	93.499	Chinchilla_lanigera
ENSCHIG00000012897	SKIV2L	100	94.623	ENSCSAG00000008988	SKIV2L	100	94.623	Chlorocebus_sabaeus
ENSCHIG00000012897	SKIV2L	87	64.327	ENSCPBG00000000343	SKIV2L	96	64.327	Chrysemys_picta_bellii
ENSCHIG00000012897	SKIV2L	94	51.310	ENSCING00000005576	-	99	51.184	Ciona_intestinalis
ENSCHIG00000012897	SKIV2L	99	94.940	ENSCANG00000039709	SKIV2L	100	94.940	Colobus_angolensis_palliatus
ENSCHIG00000012897	SKIV2L	100	94.226	ENSCGRG00001008385	Skiv2l	100	94.226	Cricetulus_griseus_chok1gshd
ENSCHIG00000012897	SKIV2L	99	61.275	ENSCSEG00000011326	skiv2l	98	61.192	Cynoglossus_semilaevis
ENSCHIG00000012897	SKIV2L	99	61.532	ENSCVAG00000003072	skiv2l	99	61.316	Cyprinodon_variegatus
ENSCHIG00000012897	SKIV2L	99	60.063	ENSDARG00000062206	skiv2l	99	60.000	Danio_rerio
ENSCHIG00000012897	SKIV2L	100	87.910	ENSDNOG00000037590	SKIV2L	100	88.409	Dasypus_novemcinctus
ENSCHIG00000012897	SKIV2L	93	43.913	FBgn0039117	tst	97	43.923	Drosophila_melanogaster
ENSCHIG00000012897	SKIV2L	72	92.802	ENSETEG00000009522	SKIV2L	72	92.802	Echinops_telfairi
ENSCHIG00000012897	SKIV2L	89	56.049	ENSEBUG00000013680	-	95	56.530	Eptatretus_burgeri
ENSCHIG00000012897	SKIV2L	93	95.869	ENSEASG00005015534	SKIV2L	100	95.869	Equus_asinus_asinus
ENSCHIG00000012897	SKIV2L	96	95.042	ENSECAG00000021823	SKIV2L	96	95.678	Equus_caballus
ENSCHIG00000012897	SKIV2L	54	98.814	ENSEEUG00000005049	SKIV2L	57	98.814	Erinaceus_europaeus
ENSCHIG00000012897	SKIV2L	99	59.731	ENSELUG00000000181	skiv2l	94	66.390	Esox_lucius
ENSCHIG00000012897	SKIV2L	100	95.666	ENSFCAG00000004519	SKIV2L	100	95.666	Felis_catus
ENSCHIG00000012897	SKIV2L	100	90.217	ENSFDAG00000009438	SKIV2L	100	90.136	Fukomys_damarensis
ENSCHIG00000012897	SKIV2L	100	60.383	ENSFHEG00000008853	skiv2l	99	61.316	Fundulus_heteroclitus
ENSCHIG00000012897	SKIV2L	99	59.327	ENSGMOG00000005926	skiv2l	98	59.350	Gadus_morhua
ENSCHIG00000012897	SKIV2L	78	60.634	ENSGALG00000035499	SKIV2L	98	61.634	Gallus_gallus
ENSCHIG00000012897	SKIV2L	99	61.679	ENSGAFG00000002382	skiv2l	99	61.637	Gambusia_affinis
ENSCHIG00000012897	SKIV2L	99	60.397	ENSGACG00000002927	skiv2l	98	60.596	Gasterosteus_aculeatus
ENSCHIG00000012897	SKIV2L	100	94.623	ENSGGOG00000002270	SKIV2L	100	94.623	Gorilla_gorilla
ENSCHIG00000012897	SKIV2L	99	61.569	ENSHBUG00000000726	skiv2l	99	61.526	Haplochromis_burtoni
ENSCHIG00000012897	SKIV2L	100	91.186	ENSHGLG00000016596	SKIV2L	100	91.587	Heterocephalus_glaber_female
ENSCHIG00000012897	SKIV2L	100	88.622	ENSHGLG00100014161	SKIV2L	100	89.022	Heterocephalus_glaber_male
ENSCHIG00000012897	SKIV2L	98	60.212	ENSHCOG00000007191	skiv2l	100	60.130	Hippocampus_comes
ENSCHIG00000012897	SKIV2L	99	59.558	ENSIPUG00000016263	skiv2l	100	59.663	Ictalurus_punctatus
ENSCHIG00000012897	SKIV2L	100	94.703	ENSSTOG00000014596	SKIV2L	100	94.703	Ictidomys_tridecemlineatus
ENSCHIG00000012897	SKIV2L	71	58.993	ENSLACG00000002986	-	73	58.438	Latimeria_chalumnae
ENSCHIG00000012897	SKIV2L	100	93.740	ENSLAFG00000014231	SKIV2L	100	93.740	Loxodonta_africana
ENSCHIG00000012897	SKIV2L	100	95.024	ENSMFAG00000034235	SKIV2L	100	95.024	Macaca_fascicularis
ENSCHIG00000012897	SKIV2L	100	94.944	ENSMMUG00000000736	SKIV2L	100	94.944	Macaca_mulatta
ENSCHIG00000012897	SKIV2L	100	94.944	ENSMNEG00000044474	SKIV2L	100	94.944	Macaca_nemestrina
ENSCHIG00000012897	SKIV2L	100	94.703	ENSMLEG00000030512	SKIV2L	100	94.703	Mandrillus_leucophaeus
ENSCHIG00000012897	SKIV2L	99	60.728	ENSMAMG00000002927	skiv2l	99	60.594	Mastacembelus_armatus
ENSCHIG00000012897	SKIV2L	99	61.569	ENSMZEG00005026415	skiv2l	99	61.526	Maylandia_zebra
ENSCHIG00000012897	SKIV2L	52	70.612	ENSMGAG00000001320	SKIV2L	97	50.734	Meleagris_gallopavo
ENSCHIG00000012897	SKIV2L	100	93.344	ENSMAUG00000018613	Skiv2l	100	93.590	Mesocricetus_auratus
ENSCHIG00000012897	SKIV2L	100	94.462	ENSMICG00000046331	SKIV2L	100	94.462	Microcebus_murinus
ENSCHIG00000012897	SKIV2L	100	91.981	ENSMOCG00000014240	Skiv2l	100	92.141	Microtus_ochrogaster
ENSCHIG00000012897	SKIV2L	99	60.974	ENSMMOG00000014547	skiv2l	98	61.089	Mola_mola
ENSCHIG00000012897	SKIV2L	100	87.670	ENSMODG00000015052	SKIV2L	100	87.670	Monodelphis_domestica
ENSCHIG00000012897	SKIV2L	99	59.903	ENSMALG00000010535	skiv2l	98	59.886	Monopterus_albus
ENSCHIG00000012897	SKIV2L	100	93.424	MGP_CAROLIEiJ_G0021477	Skiv2l	100	93.424	Mus_caroli
ENSCHIG00000012897	SKIV2L	100	93.344	ENSMUSG00000040356	Skiv2l	100	93.344	Mus_musculus
ENSCHIG00000012897	SKIV2L	100	92.863	MGP_PahariEiJ_G0020472	Skiv2l	100	92.863	Mus_pahari
ENSCHIG00000012897	SKIV2L	100	92.943	MGP_SPRETEiJ_G0022382	Skiv2l	100	92.943	Mus_spretus
ENSCHIG00000012897	SKIV2L	100	95.345	ENSMPUG00000010567	SKIV2L	100	95.345	Mustela_putorius_furo
ENSCHIG00000012897	SKIV2L	100	93.981	ENSMLUG00000000628	SKIV2L	100	93.981	Myotis_lucifugus
ENSCHIG00000012897	SKIV2L	99	60.894	ENSNBRG00000018650	skiv2l	98	60.726	Neolamprologus_brichardi
ENSCHIG00000012897	SKIV2L	98	91.606	ENSNLEG00000006451	SKIV2L	99	91.687	Nomascus_leucogenys
ENSCHIG00000012897	SKIV2L	78	91.150	ENSMEUG00000006072	SKIV2L	78	91.150	Notamacropus_eugenii
ENSCHIG00000012897	SKIV2L	100	93.981	ENSOPRG00000003972	SKIV2L	100	93.981	Ochotona_princeps
ENSCHIG00000012897	SKIV2L	100	92.295	ENSODEG00000017516	SKIV2L	100	92.295	Octodon_degus
ENSCHIG00000012897	SKIV2L	99	62.072	ENSONIG00000013500	skiv2l	99	62.328	Oreochromis_niloticus
ENSCHIG00000012897	SKIV2L	100	94.944	ENSOCUG00000007019	SKIV2L	100	94.944	Oryctolagus_cuniculus
ENSCHIG00000012897	SKIV2L	99	61.769	ENSORLG00000002021	skiv2l	99	61.779	Oryzias_latipes
ENSCHIG00000012897	SKIV2L	99	61.690	ENSORLG00020009462	skiv2l	99	61.779	Oryzias_latipes_hni
ENSCHIG00000012897	SKIV2L	99	61.344	ENSORLG00015016750	skiv2l	99	61.538	Oryzias_latipes_hsok
ENSCHIG00000012897	SKIV2L	99	62.113	ENSOMEG00000008531	skiv2l	99	61.928	Oryzias_melastigma
ENSCHIG00000012897	SKIV2L	100	94.703	ENSOGAG00000009578	SKIV2L	100	94.703	Otolemur_garnettii
ENSCHIG00000012897	SKIV2L	100	93.892	ENSOARG00000002411	-	100	93.892	Ovis_aries
ENSCHIG00000012897	SKIV2L	98	93.922	ENSPPAG00000040211	SKIV2L	99	93.922	Pan_paniscus
ENSCHIG00000012897	SKIV2L	100	95.746	ENSPPRG00000005017	SKIV2L	100	95.746	Panthera_pardus
ENSCHIG00000012897	SKIV2L	100	95.265	ENSPTIG00000021656	SKIV2L	100	95.265	Panthera_tigris_altaica
ENSCHIG00000012897	SKIV2L	100	94.783	ENSPTRG00000017997	SKIV2L	100	94.783	Pan_troglodytes
ENSCHIG00000012897	SKIV2L	98	93.512	ENSPANG00000011501	SKIV2L	99	93.512	Papio_anubis
ENSCHIG00000012897	SKIV2L	99	60.252	ENSPKIG00000011876	skiv2l	99	60.398	Paramormyrops_kingsleyae
ENSCHIG00000012897	SKIV2L	99	60.723	ENSPMGG00000019707	skiv2l	98	60.795	Periophthalmus_magnuspinnatus
ENSCHIG00000012897	SKIV2L	100	93.986	ENSPEMG00000019001	Skiv2l	100	93.986	Peromyscus_maniculatus_bairdii
ENSCHIG00000012897	SKIV2L	100	87.680	ENSPCIG00000018792	SKIV2L	100	87.680	Phascolarctos_cinereus
ENSCHIG00000012897	SKIV2L	99	61.630	ENSPFOG00000002424	skiv2l	99	61.588	Poecilia_formosa
ENSCHIG00000012897	SKIV2L	99	61.758	ENSPLAG00000018304	skiv2l	99	61.717	Poecilia_latipinna
ENSCHIG00000012897	SKIV2L	99	61.551	ENSPMEG00000006997	skiv2l	99	61.508	Poecilia_mexicana
ENSCHIG00000012897	SKIV2L	99	60.048	ENSPREG00000002277	skiv2l	98	60.032	Poecilia_reticulata
ENSCHIG00000012897	SKIV2L	100	93.981	ENSPPYG00000016472	SKIV2L	100	93.981	Pongo_abelii
ENSCHIG00000012897	SKIV2L	77	93.702	ENSPCAG00000004178	SKIV2L	77	93.702	Procavia_capensis
ENSCHIG00000012897	SKIV2L	100	95.506	ENSPCOG00000010308	SKIV2L	100	95.506	Propithecus_coquereli
ENSCHIG00000012897	SKIV2L	100	93.820	ENSPVAG00000005136	SKIV2L	100	93.820	Pteropus_vampyrus
ENSCHIG00000012897	SKIV2L	99	59.438	ENSPNYG00000017853	skiv2l	97	66.943	Pundamilia_nyererei
ENSCHIG00000012897	SKIV2L	98	60.689	ENSPNAG00000011823	skiv2l	99	60.866	Pygocentrus_nattereri
ENSCHIG00000012897	SKIV2L	100	93.745	ENSRNOG00000000421	Skiv2l	100	93.745	Rattus_norvegicus
ENSCHIG00000012897	SKIV2L	98	92.146	ENSRBIG00000035485	SKIV2L	99	92.146	Rhinopithecus_bieti
ENSCHIG00000012897	SKIV2L	100	94.703	ENSRROG00000036429	SKIV2L	100	94.703	Rhinopithecus_roxellana
ENSCHIG00000012897	SKIV2L	93	37.371	YLR398C	-	93	37.291	Saccharomyces_cerevisiae
ENSCHIG00000012897	SKIV2L	100	94.864	ENSSBOG00000027920	SKIV2L	100	94.864	Saimiri_boliviensis_boliviensis
ENSCHIG00000012897	SKIV2L	100	87.270	ENSSHAG00000008963	SKIV2L	100	86.229	Sarcophilus_harrisii
ENSCHIG00000012897	SKIV2L	99	61.085	ENSSFOG00015016930	skiv2l	99	61.195	Scleropages_formosus
ENSCHIG00000012897	SKIV2L	99	60.734	ENSSMAG00000020185	skiv2l	99	60.594	Scophthalmus_maximus
ENSCHIG00000012897	SKIV2L	99	61.520	ENSSDUG00000019977	skiv2l	99	61.477	Seriola_dumerili
ENSCHIG00000012897	SKIV2L	99	60.338	ENSSLDG00000024382	skiv2l	98	60.407	Seriola_lalandi_dorsalis
ENSCHIG00000012897	SKIV2L	99	61.634	ENSSPUG00000012945	SKIV2L	98	61.848	Sphenodon_punctatus
ENSCHIG00000012897	SKIV2L	94	61.288	ENSSPAG00000012904	skiv2l	98	61.238	Stegastes_partitus
ENSCHIG00000012897	SKIV2L	100	95.746	ENSSSCG00000001424	SKIV2L	100	95.746	Sus_scrofa
ENSCHIG00000012897	SKIV2L	85	54.695	ENSTRUG00000000966	skiv2l	100	55.214	Takifugu_rubripes
ENSCHIG00000012897	SKIV2L	99	59.602	ENSTNIG00000004382	skiv2l	98	59.677	Tetraodon_nigroviridis
ENSCHIG00000012897	SKIV2L	94	92.883	ENSTBEG00000003462	SKIV2L	94	92.883	Tupaia_belangeri
ENSCHIG00000012897	SKIV2L	100	91.091	ENSTTRG00000005931	SKIV2L	100	91.091	Tursiops_truncatus
ENSCHIG00000012897	SKIV2L	100	95.907	ENSUAMG00000024336	SKIV2L	100	95.907	Ursus_americanus
ENSCHIG00000012897	SKIV2L	93	95.869	ENSUMAG00000012666	SKIV2L	100	95.869	Ursus_maritimus
ENSCHIG00000012897	SKIV2L	98	95.355	ENSVVUG00000022807	SKIV2L	98	95.355	Vulpes_vulpes
ENSCHIG00000012897	SKIV2L	100	58.558	ENSXETG00000010932	skiv2l	100	58.749	Xenopus_tropicalis
ENSCHIG00000012897	SKIV2L	99	61.668	ENSXCOG00000019517	skiv2l	96	61.669	Xiphophorus_couchianus
ENSCHIG00000012897	SKIV2L	99	61.362	ENSXMAG00000014079	skiv2l	99	61.316	Xiphophorus_maculatus