EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000012907 (Gene tree)
Gene ID: 102179362
Gene Symbol: POLR2F
Alias: HRBP14.4|RPB6
Full Name: RNA polymerase II subunit F
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 8042 bases
Position: chr5:108675640-108683681
Accession: 102179362
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000010381	RNA_pol_Rpb6	PF01192.22	1.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000018159	POLR2F-201	384	XM_005681064	ENSCHIP00000010381	127 (aa)	XP_005681121	UPI000D1928DA

Gene Model

Click here to download ENSCHIG00000012907's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03020	RNA polymerase	KEGG
chx04623	Cytosolic DNA-sensing pathway	KEGG
chx05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000012907's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000012907	POLR2F	96	99.180	ENSG00000100142	POLR2F	100	99.180	Homo_sapiens
ENSCHIG00000012907	POLR2F	83	89.623	ENSAPOG00000002902	polr2f	83	89.623	Acanthochromis_polyacanthus
ENSCHIG00000012907	POLR2F	95	98.347	ENSAMEG00000010331	POLR2F	95	98.347	Ailuropoda_melanoleuca
ENSCHIG00000012907	POLR2F	83	89.623	ENSACIG00000000923	polr2f	83	89.623	Amphilophus_citrinellus
ENSCHIG00000012907	POLR2F	83	90.566	ENSAOCG00000003182	polr2f	83	90.566	Amphiprion_ocellaris
ENSCHIG00000012907	POLR2F	83	90.566	ENSAPEG00000012999	polr2f	83	90.566	Amphiprion_percula
ENSCHIG00000012907	POLR2F	83	89.623	ENSATEG00000008929	polr2f	83	89.623	Anabas_testudineus
ENSCHIG00000012907	POLR2F	94	97.500	ENSAPLG00000015235	POLR2F	96	97.500	Anas_platyrhynchos
ENSCHIG00000012907	POLR2F	95	98.347	ENSACAG00000015288	POLR2F	95	98.347	Anolis_carolinensis
ENSCHIG00000012907	POLR2F	96	99.180	ENSANAG00000020840	POLR2F	100	99.180	Aotus_nancymaae
ENSCHIG00000012907	POLR2F	83	90.566	ENSACLG00000016129	polr2f	83	90.566	Astatotilapia_calliptera
ENSCHIG00000012907	POLR2F	83	89.623	ENSAMXG00000012812	polr2f	83	89.623	Astyanax_mexicanus
ENSCHIG00000012907	POLR2F	95	99.174	ENSBTAG00000004820	POLR2F	95	99.174	Bos_taurus
ENSCHIG00000012907	POLR2F	63	77.500	WBGene00007355	rpb-6	68	70.213	Caenorhabditis_elegans
ENSCHIG00000012907	POLR2F	96	99.180	ENSCJAG00000048241	POLR2F	100	99.180	Callithrix_jacchus
ENSCHIG00000012907	POLR2F	95	98.347	ENSCAFG00000001437	POLR2F	95	98.347	Canis_familiaris
ENSCHIG00000012907	POLR2F	95	98.347	ENSTSYG00000008187	POLR2F	95	98.347	Carlito_syrichta
ENSCHIG00000012907	POLR2F	94	100.000	ENSCAPG00000013419	POLR2F	94	100.000	Cavia_aperea
ENSCHIG00000012907	POLR2F	95	99.174	ENSCPOG00000034094	POLR2F	95	99.174	Cavia_porcellus
ENSCHIG00000012907	POLR2F	95	99.174	ENSCCAG00000036489	POLR2F	95	99.174	Cebus_capucinus
ENSCHIG00000012907	POLR2F	96	99.180	ENSCATG00000041014	POLR2F	100	99.180	Cercocebus_atys
ENSCHIG00000012907	POLR2F	97	98.374	ENSCLAG00000017167	POLR2F	95	99.174	Chinchilla_lanigera
ENSCHIG00000012907	POLR2F	95	99.174	ENSCSAG00000006862	POLR2F	95	99.174	Chlorocebus_sabaeus
ENSCHIG00000012907	POLR2F	94	99.167	ENSCPBG00000023030	POLR2F	62	99.167	Chrysemys_picta_bellii
ENSCHIG00000012907	POLR2F	81	75.000	ENSCING00000019359	-	73	75.000	Ciona_intestinalis
ENSCHIG00000012907	POLR2F	96	99.180	ENSCANG00000041884	POLR2F	100	99.180	Colobus_angolensis_palliatus
ENSCHIG00000012907	POLR2F	95	99.174	ENSCGRG00001023541	POLR2F	95	99.174	Cricetulus_griseus_chok1gshd
ENSCHIG00000012907	POLR2F	95	99.174	ENSCGRG00000011921	POLR2F	95	99.174	Cricetulus_griseus_crigri
ENSCHIG00000012907	POLR2F	83	90.566	ENSCSEG00000006848	polr2f	83	90.566	Cynoglossus_semilaevis
ENSCHIG00000012907	POLR2F	95	86.777	ENSCVAG00000010437	polr2f	83	89.623	Cyprinodon_variegatus
ENSCHIG00000012907	POLR2F	83	89.623	ENSDARG00000036625	polr2f	83	89.623	Danio_rerio
ENSCHIG00000012907	POLR2F	95	99.174	ENSDNOG00000005884	POLR2F	95	99.174	Dasypus_novemcinctus
ENSCHIG00000012907	POLR2F	95	99.174	ENSDORG00000024789	Polr2f	95	99.174	Dipodomys_ordii
ENSCHIG00000012907	POLR2F	80	72.115	FBgn0003275	RpII18	79	72.115	Drosophila_melanogaster
ENSCHIG00000012907	POLR2F	56	77.465	ENSEBUG00000008509	polr2f	73	77.465	Eptatretus_burgeri
ENSCHIG00000012907	POLR2F	72	71.429	ENSEBUG00000002842	-	90	63.462	Eptatretus_burgeri
ENSCHIG00000012907	POLR2F	76	93.814	ENSEASG00005018802	-	88	92.857	Equus_asinus_asinus
ENSCHIG00000012907	POLR2F	95	96.694	ENSEEUG00000011014	POLR2F	95	96.694	Erinaceus_europaeus
ENSCHIG00000012907	POLR2F	83	89.623	ENSELUG00000000319	polr2f	83	89.623	Esox_lucius
ENSCHIG00000012907	POLR2F	96	97.541	ENSFCAG00000002806	POLR2F	100	97.541	Felis_catus
ENSCHIG00000012907	POLR2F	95	99.174	ENSFDAG00000009926	POLR2F	95	99.174	Fukomys_damarensis
ENSCHIG00000012907	POLR2F	88	88.393	ENSFHEG00000005448	polr2f	84	88.679	Fundulus_heteroclitus
ENSCHIG00000012907	POLR2F	95	81.818	ENSGMOG00000009967	polr2f	83	83.962	Gadus_morhua
ENSCHIG00000012907	POLR2F	95	96.694	ENSGALG00000012291	POLR2F	95	96.694	Gallus_gallus
ENSCHIG00000012907	POLR2F	95	85.950	ENSGAFG00000017573	polr2f	83	88.679	Gambusia_affinis
ENSCHIG00000012907	POLR2F	95	83.471	ENSGACG00000007322	polr2f	83	86.792	Gasterosteus_aculeatus
ENSCHIG00000012907	POLR2F	95	99.174	ENSGAGG00000021757	POLR2F	95	98.347	Gopherus_agassizii
ENSCHIG00000012907	POLR2F	96	99.180	ENSGGOG00000005213	POLR2F	100	99.180	Gorilla_gorilla
ENSCHIG00000012907	POLR2F	83	90.566	ENSHBUG00000022089	polr2f	83	90.566	Haplochromis_burtoni
ENSCHIG00000012907	POLR2F	95	99.174	ENSHGLG00000018942	POLR2F	95	99.174	Heterocephalus_glaber_female
ENSCHIG00000012907	POLR2F	95	99.174	ENSHGLG00100012851	POLR2F	95	99.174	Heterocephalus_glaber_male
ENSCHIG00000012907	POLR2F	83	86.792	ENSHCOG00000006149	polr2f	83	86.792	Hippocampus_comes
ENSCHIG00000012907	POLR2F	76	91.753	ENSIPUG00000000814	polr2f	100	91.753	Ictalurus_punctatus
ENSCHIG00000012907	POLR2F	95	99.174	ENSSTOG00000025722	POLR2F	95	99.174	Ictidomys_tridecemlineatus
ENSCHIG00000012907	POLR2F	95	99.174	ENSJJAG00000008097	Polr2f	95	99.174	Jaculus_jaculus
ENSCHIG00000012907	POLR2F	83	90.566	ENSKMAG00000014230	polr2f	83	90.566	Kryptolebias_marmoratus
ENSCHIG00000012907	POLR2F	83	89.623	ENSLBEG00000008383	polr2f	88	89.623	Labrus_bergylta
ENSCHIG00000012907	POLR2F	83	93.396	ENSLACG00000003931	POLR2F	83	93.396	Latimeria_chalumnae
ENSCHIG00000012907	POLR2F	83	88.073	ENSLOCG00000011827	polr2f	84	88.073	Lepisosteus_oculatus
ENSCHIG00000012907	POLR2F	95	99.174	ENSLAFG00000012632	POLR2F	95	99.174	Loxodonta_africana
ENSCHIG00000012907	POLR2F	96	99.180	ENSMFAG00000033687	POLR2F	100	99.180	Macaca_fascicularis
ENSCHIG00000012907	POLR2F	96	99.180	ENSMMUG00000038231	POLR2F	100	99.180	Macaca_mulatta
ENSCHIG00000012907	POLR2F	96	99.180	ENSMNEG00000044365	POLR2F	100	99.180	Macaca_nemestrina
ENSCHIG00000012907	POLR2F	96	99.180	ENSMLEG00000033077	POLR2F	100	99.180	Mandrillus_leucophaeus
ENSCHIG00000012907	POLR2F	83	90.566	ENSMAMG00000008056	polr2f	83	90.566	Mastacembelus_armatus
ENSCHIG00000012907	POLR2F	83	90.566	ENSMZEG00005005705	polr2f	83	90.566	Maylandia_zebra
ENSCHIG00000012907	POLR2F	95	96.694	ENSMGAG00000012504	POLR2F	95	96.694	Meleagris_gallopavo
ENSCHIG00000012907	POLR2F	95	99.174	ENSMAUG00000018586	Polr2f	95	99.174	Mesocricetus_auratus
ENSCHIG00000012907	POLR2F	96	99.180	ENSMICG00000013128	POLR2F	100	99.180	Microcebus_murinus
ENSCHIG00000012907	POLR2F	95	99.174	ENSMOCG00000000237	Polr2f	95	99.174	Microtus_ochrogaster
ENSCHIG00000012907	POLR2F	83	90.566	ENSMMOG00000005106	polr2f	83	90.566	Mola_mola
ENSCHIG00000012907	POLR2F	95	96.694	ENSMODG00000019063	POLR2F	95	96.694	Monodelphis_domestica
ENSCHIG00000012907	POLR2F	83	89.623	ENSMALG00000001444	polr2f	83	89.623	Monopterus_albus
ENSCHIG00000012907	POLR2F	95	98.347	MGP_CAROLIEiJ_G0020006	Polr2f	95	98.347	Mus_caroli
ENSCHIG00000012907	POLR2F	95	98.347	ENSMUSG00000033020	Polr2f	95	98.347	Mus_musculus
ENSCHIG00000012907	POLR2F	95	98.347	MGP_PahariEiJ_G0020008	Polr2f	95	98.347	Mus_pahari
ENSCHIG00000012907	POLR2F	95	98.347	MGP_SPRETEiJ_G0020904	Polr2f	95	98.347	Mus_spretus
ENSCHIG00000012907	POLR2F	95	98.347	ENSMPUG00000012997	POLR2F	95	98.347	Mustela_putorius_furo
ENSCHIG00000012907	POLR2F	95	96.748	ENSMLUG00000014315	-	95	96.748	Myotis_lucifugus
ENSCHIG00000012907	POLR2F	93	91.525	ENSMLUG00000029612	-	82	94.175	Myotis_lucifugus
ENSCHIG00000012907	POLR2F	95	99.174	ENSNGAG00000020682	Polr2f	95	99.174	Nannospalax_galili
ENSCHIG00000012907	POLR2F	83	89.623	ENSNBRG00000002492	polr2f	83	89.623	Neolamprologus_brichardi
ENSCHIG00000012907	POLR2F	96	99.180	ENSNLEG00000014987	-	100	99.180	Nomascus_leucogenys
ENSCHIG00000012907	POLR2F	95	99.174	ENSODEG00000014123	POLR2F	95	99.174	Octodon_degus
ENSCHIG00000012907	POLR2F	83	89.623	ENSONIG00000008394	polr2f	83	89.623	Oreochromis_niloticus
ENSCHIG00000012907	POLR2F	95	98.347	ENSOANG00000014684	POLR2F	95	98.347	Ornithorhynchus_anatinus
ENSCHIG00000012907	POLR2F	95	99.174	ENSOCUG00000012064	POLR2F	95	99.174	Oryctolagus_cuniculus
ENSCHIG00000012907	POLR2F	95	85.950	ENSORLG00000014580	polr2f	83	89.623	Oryzias_latipes
ENSCHIG00000012907	POLR2F	95	86.777	ENSORLG00020006910	polr2f	83	90.566	Oryzias_latipes_hni
ENSCHIG00000012907	POLR2F	80	84.158	ENSORLG00015015332	polr2f	63	88.172	Oryzias_latipes_hsok
ENSCHIG00000012907	POLR2F	95	99.174	ENSOGAG00000025463	POLR2F	95	99.174	Otolemur_garnettii
ENSCHIG00000012907	POLR2F	95	99.174	ENSOARG00000014692	POLR2F	95	99.174	Ovis_aries
ENSCHIG00000012907	POLR2F	96	99.180	ENSPPAG00000024276	POLR2F	100	99.180	Pan_paniscus
ENSCHIG00000012907	POLR2F	96	97.541	ENSPPRG00000013030	POLR2F	100	97.541	Panthera_pardus
ENSCHIG00000012907	POLR2F	96	95.082	ENSPTIG00000000632	POLR2F	100	95.082	Panthera_tigris_altaica
ENSCHIG00000012907	POLR2F	96	99.180	ENSPTRG00000014356	POLR2F	100	99.180	Pan_troglodytes
ENSCHIG00000012907	POLR2F	96	99.180	ENSPANG00000023979	POLR2F	100	99.180	Papio_anubis
ENSCHIG00000012907	POLR2F	83	89.623	ENSPKIG00000002464	polr2f	83	89.623	Paramormyrops_kingsleyae
ENSCHIG00000012907	POLR2F	56	100.000	ENSPSIG00000013913	POLR2F	100	100.000	Pelodiscus_sinensis
ENSCHIG00000012907	POLR2F	83	90.566	ENSPMGG00000009619	polr2f	83	90.566	Periophthalmus_magnuspinnatus
ENSCHIG00000012907	POLR2F	95	99.174	ENSPEMG00000008322	Polr2f	95	99.174	Peromyscus_maniculatus_bairdii
ENSCHIG00000012907	POLR2F	95	96.694	ENSPCIG00000012000	-	95	96.694	Phascolarctos_cinereus
ENSCHIG00000012907	POLR2F	95	86.777	ENSPFOG00000000139	polr2f	83	89.623	Poecilia_formosa
ENSCHIG00000012907	POLR2F	95	86.777	ENSPLAG00000000988	polr2f	83	89.623	Poecilia_latipinna
ENSCHIG00000012907	POLR2F	95	86.777	ENSPMEG00000019063	polr2f	83	89.623	Poecilia_mexicana
ENSCHIG00000012907	POLR2F	72	85.870	ENSPREG00000016749	polr2f	79	89.610	Poecilia_reticulata
ENSCHIG00000012907	POLR2F	95	99.174	ENSPPYG00000011809	POLR2F	95	99.174	Pongo_abelii
ENSCHIG00000012907	POLR2F	96	99.180	ENSPCOG00000025716	POLR2F	100	99.180	Propithecus_coquereli
ENSCHIG00000012907	POLR2F	74	97.872	ENSPVAG00000010107	POLR2F	60	97.872	Pteropus_vampyrus
ENSCHIG00000012907	POLR2F	83	90.566	ENSPNYG00000019790	polr2f	83	90.566	Pundamilia_nyererei
ENSCHIG00000012907	POLR2F	83	90.566	ENSPNAG00000009017	polr2f	83	90.566	Pygocentrus_nattereri
ENSCHIG00000012907	POLR2F	95	98.347	ENSRNOG00000011214	Polr2f	95	98.347	Rattus_norvegicus
ENSCHIG00000012907	POLR2F	96	99.180	ENSRBIG00000044878	POLR2F	100	99.180	Rhinopithecus_bieti
ENSCHIG00000012907	POLR2F	96	99.180	ENSRROG00000019586	POLR2F	100	99.180	Rhinopithecus_roxellana
ENSCHIG00000012907	POLR2F	96	99.180	ENSSBOG00000023340	POLR2F	100	99.180	Saimiri_boliviensis_boliviensis
ENSCHIG00000012907	POLR2F	95	96.694	ENSSHAG00000008502	POLR2F	95	96.694	Sarcophilus_harrisii
ENSCHIG00000012907	POLR2F	83	90.566	ENSSFOG00015012810	polr2f	83	90.566	Scleropages_formosus
ENSCHIG00000012907	POLR2F	83	89.623	ENSSMAG00000005354	polr2f	83	89.623	Scophthalmus_maximus
ENSCHIG00000012907	POLR2F	83	90.566	ENSSDUG00000016273	polr2f	83	90.566	Seriola_dumerili
ENSCHIG00000012907	POLR2F	83	90.566	ENSSLDG00000024895	polr2f	83	90.566	Seriola_lalandi_dorsalis
ENSCHIG00000012907	POLR2F	95	98.347	ENSSPUG00000011343	POLR2F	95	98.347	Sphenodon_punctatus
ENSCHIG00000012907	POLR2F	83	90.566	ENSSPAG00000019646	polr2f	83	90.566	Stegastes_partitus
ENSCHIG00000012907	POLR2F	95	98.347	ENSSSCG00000000116	POLR2F	95	98.347	Sus_scrofa
ENSCHIG00000012907	POLR2F	69	97.727	ENSTGUG00000016504	-	100	97.727	Taeniopygia_guttata
ENSCHIG00000012907	POLR2F	95	97.521	ENSTGUG00000010476	POLR2F	88	97.521	Taeniopygia_guttata
ENSCHIG00000012907	POLR2F	83	89.623	ENSTRUG00000021130	polr2f	60	89.623	Takifugu_rubripes
ENSCHIG00000012907	POLR2F	83	90.566	ENSTNIG00000010827	polr2f	83	90.566	Tetraodon_nigroviridis
ENSCHIG00000012907	POLR2F	74	97.872	ENSTTRG00000004817	POLR2F	60	97.872	Tursiops_truncatus
ENSCHIG00000012907	POLR2F	95	98.347	ENSUAMG00000020504	POLR2F	95	98.347	Ursus_americanus
ENSCHIG00000012907	POLR2F	95	98.347	ENSUMAG00000015052	POLR2F	95	98.347	Ursus_maritimus
ENSCHIG00000012907	POLR2F	99	96.032	ENSVVUG00000024021	POLR2F	95	96.032	Vulpes_vulpes
ENSCHIG00000012907	POLR2F	83	93.396	ENSXETG00000006346	polr2f	83	93.396	Xenopus_tropicalis
ENSCHIG00000012907	POLR2F	95	86.777	ENSXCOG00000015983	polr2f	83	89.623	Xiphophorus_couchianus
ENSCHIG00000012907	POLR2F	95	86.777	ENSXMAG00000001559	polr2f	83	89.623	Xiphophorus_maculatus