EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000013003 (Gene tree)
Gene ID: 102169334
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 82412 bases
Position: chr1:44200385-44282796
Accession: 102169334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000010507	CMS1	PF14617.6	8.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000018286	CMSS1-201	5401	XM_018058548	ENSCHIP00000010507	276 (aa)	XP_017914037	UPI000D1912B5

Gene Model

Click here to download ENSCHIG00000013003's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000013003's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000013003	CMSS1	93	87.549	ENSG00000184220	CMSS1	99	91.358	Homo_sapiens
ENSCHIG00000013003	CMSS1	73	64.356	ENSAPOG00000010604	cmss1	99	57.490	Acanthochromis_polyacanthus
ENSCHIG00000013003	CMSS1	93	88.372	ENSAMEG00000004092	CMSS1	99	88.372	Ailuropoda_melanoleuca
ENSCHIG00000013003	CMSS1	73	53.960	ENSACIG00000021854	cmss1	75	53.960	Amphilophus_citrinellus
ENSCHIG00000013003	CMSS1	73	63.366	ENSAOCG00000013361	cmss1	97	52.688	Amphiprion_ocellaris
ENSCHIG00000013003	CMSS1	73	63.366	ENSAPEG00000005829	cmss1	97	52.500	Amphiprion_percula
ENSCHIG00000013003	CMSS1	82	62.281	ENSATEG00000008209	cmss1	97	55.894	Anabas_testudineus
ENSCHIG00000013003	CMSS1	83	68.996	ENSAPLG00000010542	CMSS1	99	68.996	Anas_platyrhynchos
ENSCHIG00000013003	CMSS1	93	63.359	ENSACAG00000011065	CMSS1	96	63.359	Anolis_carolinensis
ENSCHIG00000013003	CMSS1	95	87.023	ENSANAG00000023565	CMSS1	100	87.023	Aotus_nancymaae
ENSCHIG00000013003	CMSS1	73	60.396	ENSACLG00000027294	cmss1	83	54.959	Astatotilapia_calliptera
ENSCHIG00000013003	CMSS1	72	56.500	ENSAMXG00000002046	cmss1	84	52.439	Astyanax_mexicanus
ENSCHIG00000013003	CMSS1	100	96.739	ENSBTAG00000013663	CMSS1	100	96.739	Bos_taurus
ENSCHIG00000013003	CMSS1	93	87.984	ENSCJAG00000000610	CMSS1	98	87.984	Callithrix_jacchus
ENSCHIG00000013003	CMSS1	100	89.855	ENSCAFG00000009230	CMSS1	100	89.855	Canis_familiaris
ENSCHIG00000013003	CMSS1	94	89.231	ENSCAFG00020009464	-	95	89.231	Canis_lupus_dingo
ENSCHIG00000013003	CMSS1	89	78.862	ENSCAFG00020024156	-	77	78.862	Canis_lupus_dingo
ENSCHIG00000013003	CMSS1	100	85.507	ENSTSYG00000009266	CMSS1	100	85.507	Carlito_syrichta
ENSCHIG00000013003	CMSS1	81	71.616	ENSCAPG00000013584	CMSS1	100	71.179	Cavia_aperea
ENSCHIG00000013003	CMSS1	93	86.381	ENSCPOG00000014680	CMSS1	92	86.381	Cavia_porcellus
ENSCHIG00000013003	CMSS1	93	89.147	ENSCCAG00000034685	CMSS1	98	89.147	Cebus_capucinus
ENSCHIG00000013003	CMSS1	93	88.716	ENSCATG00000031980	CMSS1	98	88.716	Cercocebus_atys
ENSCHIG00000013003	CMSS1	83	92.105	ENSCLAG00000011241	CMSS1	98	92.105	Chinchilla_lanigera
ENSCHIG00000013003	CMSS1	88	88.934	ENSCSAG00000006024	CMSS1	99	88.934	Chlorocebus_sabaeus
ENSCHIG00000013003	CMSS1	94	69.112	ENSCHOG00000012098	CMSS1	94	69.112	Choloepus_hoffmanni
ENSCHIG00000013003	CMSS1	70	41.837	ENSCING00000014848	-	99	42.246	Ciona_intestinalis
ENSCHIG00000013003	CMSS1	93	87.938	ENSCANG00000031337	CMSS1	98	87.938	Colobus_angolensis_palliatus
ENSCHIG00000013003	CMSS1	96	77.985	ENSCGRG00001014305	Cmss1	96	77.985	Cricetulus_griseus_chok1gshd
ENSCHIG00000013003	CMSS1	93	80.859	ENSCGRG00000006722	Cmss1	99	80.859	Cricetulus_griseus_crigri
ENSCHIG00000013003	CMSS1	73	61.881	ENSCSEG00000004958	cmss1	93	52.190	Cynoglossus_semilaevis
ENSCHIG00000013003	CMSS1	73	61.881	ENSCVAG00000005039	cmss1	94	53.480	Cyprinodon_variegatus
ENSCHIG00000013003	CMSS1	82	53.247	ENSDARG00000112579	cmss1	82	52.941	Danio_rerio
ENSCHIG00000013003	CMSS1	95	85.496	ENSDNOG00000040418	CMSS1	93	85.496	Dasypus_novemcinctus
ENSCHIG00000013003	CMSS1	93	85.938	ENSDORG00000010461	Cmss1	92	85.938	Dipodomys_ordii
ENSCHIG00000013003	CMSS1	100	78.058	ENSEASG00005010966	CMSS1	99	89.954	Equus_asinus_asinus
ENSCHIG00000013003	CMSS1	94	88.031	ENSECAG00000015662	CMSS1	99	90.265	Equus_caballus
ENSCHIG00000013003	CMSS1	83	60.526	ENSEEUG00000007624	-	82	61.842	Erinaceus_europaeus
ENSCHIG00000013003	CMSS1	87	57.202	ENSELUG00000019459	cmss1	81	57.202	Esox_lucius
ENSCHIG00000013003	CMSS1	93	91.440	ENSFCAG00000044577	CMSS1	92	91.440	Felis_catus
ENSCHIG00000013003	CMSS1	86	63.713	ENSFALG00000005816	CMSS1	100	63.713	Ficedula_albicollis
ENSCHIG00000013003	CMSS1	83	89.474	ENSFDAG00000012577	CMSS1	100	89.474	Fukomys_damarensis
ENSCHIG00000013003	CMSS1	82	61.472	ENSFHEG00000012008	cmss1	95	61.472	Fundulus_heteroclitus
ENSCHIG00000013003	CMSS1	73	61.386	ENSGMOG00000016729	cmss1	72	61.386	Gadus_morhua
ENSCHIG00000013003	CMSS1	94	64.122	ENSGALG00000015267	CMSS1	99	64.615	Gallus_gallus
ENSCHIG00000013003	CMSS1	75	65.217	ENSGAFG00000021217	cmss1	77	64.851	Gambusia_affinis
ENSCHIG00000013003	CMSS1	73	56.436	ENSGACG00000002798	cmss1	72	56.436	Gasterosteus_aculeatus
ENSCHIG00000013003	CMSS1	88	69.008	ENSGAGG00000019861	CMSS1	94	69.008	Gopherus_agassizii
ENSCHIG00000013003	CMSS1	93	88.716	ENSGGOG00000014125	CMSS1	98	88.716	Gorilla_gorilla
ENSCHIG00000013003	CMSS1	73	60.396	ENSHBUG00000008431	cmss1	85	54.772	Haplochromis_burtoni
ENSCHIG00000013003	CMSS1	92	84.980	ENSHGLG00000019481	CMSS1	100	84.980	Heterocephalus_glaber_female
ENSCHIG00000013003	CMSS1	93	84.825	ENSHGLG00100010314	CMSS1	100	84.825	Heterocephalus_glaber_male
ENSCHIG00000013003	CMSS1	79	63.470	ENSHCOG00000003222	cmss1	74	63.470	Hippocampus_comes
ENSCHIG00000013003	CMSS1	80	55.204	ENSIPUG00000011591	cmss1	76	55.204	Ictalurus_punctatus
ENSCHIG00000013003	CMSS1	93	91.051	ENSSTOG00000019366	CMSS1	92	91.051	Ictidomys_tridecemlineatus
ENSCHIG00000013003	CMSS1	93	83.721	ENSJJAG00000014894	Cmss1	90	89.604	Jaculus_jaculus
ENSCHIG00000013003	CMSS1	73	54.950	ENSKMAG00000002390	cmss1	81	54.950	Kryptolebias_marmoratus
ENSCHIG00000013003	CMSS1	80	52.500	ENSLBEG00000006298	cmss1	83	57.635	Labrus_bergylta
ENSCHIG00000013003	CMSS1	83	64.783	ENSLACG00000009293	CMSS1	100	64.783	Latimeria_chalumnae
ENSCHIG00000013003	CMSS1	82	57.269	ENSLOCG00000009391	cmss1	86	55.102	Lepisosteus_oculatus
ENSCHIG00000013003	CMSS1	83	89.474	ENSLAFG00000017509	CMSS1	100	89.474	Loxodonta_africana
ENSCHIG00000013003	CMSS1	93	89.105	ENSMFAG00000045006	CMSS1	98	89.105	Macaca_fascicularis
ENSCHIG00000013003	CMSS1	95	87.356	ENSMMUG00000002939	CMSS1	98	90.909	Macaca_mulatta
ENSCHIG00000013003	CMSS1	93	88.716	ENSMNEG00000031315	CMSS1	98	88.716	Macaca_nemestrina
ENSCHIG00000013003	CMSS1	93	88.327	ENSMLEG00000033660	CMSS1	98	88.327	Mandrillus_leucophaeus
ENSCHIG00000013003	CMSS1	82	60.435	ENSMAMG00000017176	cmss1	81	59.322	Mastacembelus_armatus
ENSCHIG00000013003	CMSS1	73	60.396	ENSMZEG00005021886	cmss1	83	54.959	Maylandia_zebra
ENSCHIG00000013003	CMSS1	83	67.982	ENSMGAG00000014360	CMSS1	100	67.982	Meleagris_gallopavo
ENSCHIG00000013003	CMSS1	98	56.667	ENSMAUG00000020609	Cmss1	95	57.565	Mesocricetus_auratus
ENSCHIG00000013003	CMSS1	93	88.327	ENSMICG00000048977	CMSS1	98	88.327	Microcebus_murinus
ENSCHIG00000013003	CMSS1	98	77.037	ENSMOCG00000021937	Cmss1	96	77.323	Microtus_ochrogaster
ENSCHIG00000013003	CMSS1	73	61.881	ENSMMOG00000019794	cmss1	84	61.881	Mola_mola
ENSCHIG00000013003	CMSS1	94	72.348	ENSMODG00000002275	CMSS1	98	72.348	Monodelphis_domestica
ENSCHIG00000013003	CMSS1	87	57.377	ENSMALG00000004250	cmss1	84	56.557	Monopterus_albus
ENSCHIG00000013003	CMSS1	98	78.598	MGP_CAROLIEiJ_G0020824	Cmss1	96	78.889	Mus_caroli
ENSCHIG00000013003	CMSS1	98	79.705	ENSMUSG00000022748	Cmss1	96	80.000	Mus_musculus
ENSCHIG00000013003	CMSS1	98	76.753	MGP_PahariEiJ_G0016524	Cmss1	96	77.037	Mus_pahari
ENSCHIG00000013003	CMSS1	98	79.336	MGP_SPRETEiJ_G0021724	Cmss1	96	79.630	Mus_spretus
ENSCHIG00000013003	CMSS1	94	89.615	ENSMPUG00000011324	CMSS1	100	89.615	Mustela_putorius_furo
ENSCHIG00000013003	CMSS1	93	89.961	ENSMLUG00000001131	CMSS1	98	89.961	Myotis_lucifugus
ENSCHIG00000013003	CMSS1	97	81.413	ENSNGAG00000020316	Cmss1	96	81.413	Nannospalax_galili
ENSCHIG00000013003	CMSS1	73	59.901	ENSNBRG00000003095	cmss1	83	54.959	Neolamprologus_brichardi
ENSCHIG00000013003	CMSS1	93	90.272	ENSNLEG00000034172	CMSS1	98	90.272	Nomascus_leucogenys
ENSCHIG00000013003	CMSS1	83	66.228	ENSMEUG00000014505	CMSS1	100	66.228	Notamacropus_eugenii
ENSCHIG00000013003	CMSS1	93	89.105	ENSOPRG00000002986	CMSS1	92	89.105	Ochotona_princeps
ENSCHIG00000013003	CMSS1	98	78.519	ENSODEG00000003558	-	96	78.810	Octodon_degus
ENSCHIG00000013003	CMSS1	96	72.830	ENSODEG00000001853	-	93	74.131	Octodon_degus
ENSCHIG00000013003	CMSS1	94	69.884	ENSODEG00000009446	-	94	69.884	Octodon_degus
ENSCHIG00000013003	CMSS1	93	85.603	ENSODEG00000005226	-	92	85.603	Octodon_degus
ENSCHIG00000013003	CMSS1	73	60.396	ENSONIG00000006678	cmss1	77	60.396	Oreochromis_niloticus
ENSCHIG00000013003	CMSS1	93	70.000	ENSOANG00000007529	CMSS1	99	73.707	Ornithorhynchus_anatinus
ENSCHIG00000013003	CMSS1	100	88.406	ENSOCUG00000025366	CMSS1	100	88.406	Oryctolagus_cuniculus
ENSCHIG00000013003	CMSS1	80	63.514	ENSORLG00000020340	cmss1	89	58.103	Oryzias_latipes
ENSCHIG00000013003	CMSS1	76	57.346	ENSORLG00020012235	cmss1	85	57.426	Oryzias_latipes_hni
ENSCHIG00000013003	CMSS1	73	57.426	ENSORLG00015015551	cmss1	75	57.426	Oryzias_latipes_hsok
ENSCHIG00000013003	CMSS1	82	60.965	ENSOMEG00000012555	cmss1	88	57.874	Oryzias_melastigma
ENSCHIG00000013003	CMSS1	83	89.912	ENSOGAG00000002045	CMSS1	100	89.912	Otolemur_garnettii
ENSCHIG00000013003	CMSS1	94	98.084	ENSOARG00000017899	CMSS1	90	98.084	Ovis_aries
ENSCHIG00000013003	CMSS1	93	88.716	ENSPPAG00000038515	CMSS1	94	88.716	Pan_paniscus
ENSCHIG00000013003	CMSS1	93	90.272	ENSPPRG00000016767	CMSS1	92	90.272	Panthera_pardus
ENSCHIG00000013003	CMSS1	93	89.883	ENSPTIG00000018274	CMSS1	92	89.883	Panthera_tigris_altaica
ENSCHIG00000013003	CMSS1	93	87.938	ENSPTRG00000015157	CMSS1	99	88.525	Pan_troglodytes
ENSCHIG00000013003	CMSS1	93	86.770	ENSPANG00000019980	CMSS1	99	86.770	Papio_anubis
ENSCHIG00000013003	CMSS1	82	60.870	ENSPKIG00000012609	cmss1	100	54.613	Paramormyrops_kingsleyae
ENSCHIG00000013003	CMSS1	83	71.930	ENSPSIG00000003849	CMSS1	99	71.930	Pelodiscus_sinensis
ENSCHIG00000013003	CMSS1	73	60.099	ENSPMGG00000010286	cmss1	87	60.099	Periophthalmus_magnuspinnatus
ENSCHIG00000013003	CMSS1	93	82.422	ENSPEMG00000016384	Cmss1	91	82.422	Peromyscus_maniculatus_bairdii
ENSCHIG00000013003	CMSS1	74	52.451	ENSPMAG00000001146	cmss1	99	52.970	Petromyzon_marinus
ENSCHIG00000013003	CMSS1	93	72.308	ENSPCIG00000015656	CMSS1	98	72.308	Phascolarctos_cinereus
ENSCHIG00000013003	CMSS1	73	63.366	ENSPFOG00000016849	cmss1	71	63.366	Poecilia_formosa
ENSCHIG00000013003	CMSS1	73	62.871	ENSPLAG00000008323	cmss1	71	62.871	Poecilia_latipinna
ENSCHIG00000013003	CMSS1	73	63.366	ENSPMEG00000021020	cmss1	70	63.366	Poecilia_mexicana
ENSCHIG00000013003	CMSS1	82	59.914	ENSPREG00000007618	cmss1	69	62.871	Poecilia_reticulata
ENSCHIG00000013003	CMSS1	93	87.938	ENSPPYG00000013606	CMSS1	94	87.938	Pongo_abelii
ENSCHIG00000013003	CMSS1	93	89.105	ENSPCOG00000020035	CMSS1	98	89.105	Propithecus_coquereli
ENSCHIG00000013003	CMSS1	94	78.764	ENSPVAG00000017031	CMSS1	93	78.764	Pteropus_vampyrus
ENSCHIG00000013003	CMSS1	64	61.932	ENSPNYG00000013428	cmss1	65	61.932	Pundamilia_nyererei
ENSCHIG00000013003	CMSS1	97	47.887	ENSPNAG00000007912	cmss1	97	48.592	Pygocentrus_nattereri
ENSCHIG00000013003	CMSS1	93	81.712	ENSRNOG00000027888	Cmss1	99	81.712	Rattus_norvegicus
ENSCHIG00000013003	CMSS1	93	87.938	ENSRBIG00000037931	CMSS1	98	87.938	Rhinopithecus_bieti
ENSCHIG00000013003	CMSS1	93	87.938	ENSRROG00000042910	CMSS1	98	87.938	Rhinopithecus_roxellana
ENSCHIG00000013003	CMSS1	93	88.372	ENSSBOG00000030980	CMSS1	98	88.372	Saimiri_boliviensis_boliviensis
ENSCHIG00000013003	CMSS1	90	72.619	ENSSHAG00000009321	CMSS1	99	72.619	Sarcophilus_harrisii
ENSCHIG00000013003	CMSS1	82	59.227	ENSSFOG00015001509	cmss1	87	57.769	Scleropages_formosus
ENSCHIG00000013003	CMSS1	80	62.832	ENSSMAG00000001653	cmss1	69	63.861	Scophthalmus_maximus
ENSCHIG00000013003	CMSS1	82	60.262	ENSSDUG00000007719	cmss1	90	56.154	Seriola_dumerili
ENSCHIG00000013003	CMSS1	75	63.768	ENSSLDG00000012300	cmss1	88	54.976	Seriola_lalandi_dorsalis
ENSCHIG00000013003	CMSS1	99	71.691	ENSSARG00000003584	CMSS1	92	74.319	Sorex_araneus
ENSCHIG00000013003	CMSS1	82	69.027	ENSSPUG00000003865	CMSS1	100	69.027	Sphenodon_punctatus
ENSCHIG00000013003	CMSS1	92	55.725	ENSSPAG00000019182	cmss1	63	64.851	Stegastes_partitus
ENSCHIG00000013003	CMSS1	93	91.440	ENSSSCG00000011970	CMSS1	92	91.440	Sus_scrofa
ENSCHIG00000013003	CMSS1	83	64.912	ENSTGUG00000013635	CMSS1	99	64.912	Taeniopygia_guttata
ENSCHIG00000013003	CMSS1	73	61.386	ENSTRUG00000015265	cmss1	72	61.386	Takifugu_rubripes
ENSCHIG00000013003	CMSS1	73	53.960	ENSTNIG00000002880	cmss1	73	53.960	Tetraodon_nigroviridis
ENSCHIG00000013003	CMSS1	83	67.544	ENSTBEG00000016722	CMSS1	81	67.544	Tupaia_belangeri
ENSCHIG00000013003	CMSS1	93	89.105	ENSTTRG00000001562	CMSS1	92	89.105	Tursiops_truncatus
ENSCHIG00000013003	CMSS1	93	89.494	ENSUAMG00000024209	CMSS1	100	91.480	Ursus_americanus
ENSCHIG00000013003	CMSS1	100	88.406	ENSUMAG00000001983	CMSS1	99	89.494	Ursus_maritimus
ENSCHIG00000013003	CMSS1	83	75.877	ENSVPAG00000000263	CMSS1	82	75.877	Vicugna_pacos
ENSCHIG00000013003	CMSS1	82	88.053	ENSVVUG00000007776	-	85	90.323	Vulpes_vulpes
ENSCHIG00000013003	CMSS1	89	89.431	ENSVVUG00000021647	-	100	89.431	Vulpes_vulpes
ENSCHIG00000013003	CMSS1	84	60.684	ENSXETG00000011858	cmss1	84	60.684	Xenopus_tropicalis
ENSCHIG00000013003	CMSS1	75	63.462	ENSXCOG00000018724	cmss1	69	63.366	Xiphophorus_couchianus
ENSCHIG00000013003	CMSS1	75	63.462	ENSXMAG00000011243	cmss1	76	63.366	Xiphophorus_maculatus