EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000013171 (Gene tree)
Gene ID: 102170158
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 20456 bases
Position: chr13:38968369-38988824
Accession: 102170158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000010794	HAT	PF02184.16	9.5e-33	1	2
ENSCHIP00000010794	HAT	PF02184.16	9.5e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000018577	CRNKL1-201	2082	XM_018057255	ENSCHIP00000010794	693 (aa)	XP_017912744	UPI000D193755

Gene Model

Click here to download ENSCHIG00000013171's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000013171's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000013171	CRNKL1	99	95.488	ENSG00000101343	CRNKL1	100	95.488	Homo_sapiens
ENSCHIG00000013171	CRNKL1	99	85.631	ENSAPOG00000009705	crnkl1	99	85.631	Acanthochromis_polyacanthus
ENSCHIG00000013171	CRNKL1	99	97.234	ENSAMEG00000000270	CRNKL1	83	97.234	Ailuropoda_melanoleuca
ENSCHIG00000013171	CRNKL1	99	85.631	ENSACIG00000015267	crnkl1	91	85.631	Amphilophus_citrinellus
ENSCHIG00000013171	CRNKL1	99	85.486	ENSAOCG00000021964	crnkl1	91	85.486	Amphiprion_ocellaris
ENSCHIG00000013171	CRNKL1	99	85.362	ENSAPEG00000015041	crnkl1	92	85.362	Amphiprion_percula
ENSCHIG00000013171	CRNKL1	99	86.502	ENSATEG00000001068	crnkl1	90	86.502	Anabas_testudineus
ENSCHIG00000013171	CRNKL1	99	90.073	ENSAPLG00000013105	CRNKL1	99	90.073	Anas_platyrhynchos
ENSCHIG00000013171	CRNKL1	98	91.202	ENSACAG00000005284	CRNKL1	99	91.202	Anolis_carolinensis
ENSCHIG00000013171	CRNKL1	91	96.519	ENSANAG00000024889	CRNKL1	100	96.519	Aotus_nancymaae
ENSCHIG00000013171	CRNKL1	98	86.431	ENSACLG00000010813	crnkl1	91	85.362	Astatotilapia_calliptera
ENSCHIG00000013171	CRNKL1	96	87.349	ENSAMXG00000018334	crnkl1	93	85.465	Astyanax_mexicanus
ENSCHIG00000013171	CRNKL1	100	98.268	ENSBTAG00000008472	CRNKL1	100	98.268	Bos_taurus
ENSCHIG00000013171	CRNKL1	92	61.897	WBGene00019762	M03F8.3	93	60.602	Caenorhabditis_elegans
ENSCHIG00000013171	CRNKL1	99	95.488	ENSCJAG00000005393	CRNKL1	100	95.488	Callithrix_jacchus
ENSCHIG00000013171	CRNKL1	99	97.089	ENSCAFG00000005333	CRNKL1	94	97.089	Canis_familiaris
ENSCHIG00000013171	CRNKL1	99	97.089	ENSCAFG00020027488	CRNKL1	100	97.089	Canis_lupus_dingo
ENSCHIG00000013171	CRNKL1	99	95.633	ENSTSYG00000004197	CRNKL1	100	95.633	Carlito_syrichta
ENSCHIG00000013171	CRNKL1	95	94.051	ENSCAPG00000010501	CRNKL1	100	94.051	Cavia_aperea
ENSCHIG00000013171	CRNKL1	99	94.760	ENSCPOG00000004418	CRNKL1	100	94.760	Cavia_porcellus
ENSCHIG00000013171	CRNKL1	99	95.342	ENSCCAG00000027037	CRNKL1	100	95.342	Cebus_capucinus
ENSCHIG00000013171	CRNKL1	99	95.488	ENSCATG00000034247	CRNKL1	100	95.488	Cercocebus_atys
ENSCHIG00000013171	CRNKL1	99	95.342	ENSCLAG00000013859	CRNKL1	100	95.342	Chinchilla_lanigera
ENSCHIG00000013171	CRNKL1	99	95.488	ENSCSAG00000011434	CRNKL1	100	95.488	Chlorocebus_sabaeus
ENSCHIG00000013171	CRNKL1	99	96.361	ENSCHOG00000006371	CRNKL1	84	96.361	Choloepus_hoffmanni
ENSCHIG00000013171	CRNKL1	99	92.263	ENSCPBG00000023501	CRNKL1	99	92.263	Chrysemys_picta_bellii
ENSCHIG00000013171	CRNKL1	96	68.882	ENSCING00000002709	-	99	67.595	Ciona_intestinalis
ENSCHIG00000013171	CRNKL1	99	95.488	ENSCANG00000038789	CRNKL1	100	95.488	Colobus_angolensis_palliatus
ENSCHIG00000013171	CRNKL1	99	95.930	ENSCGRG00001000687	-	99	95.930	Cricetulus_griseus_chok1gshd
ENSCHIG00000013171	CRNKL1	99	95.930	ENSCGRG00001001115	-	99	95.930	Cricetulus_griseus_chok1gshd
ENSCHIG00000013171	CRNKL1	99	95.930	ENSCGRG00000007854	Crnkl1	99	95.930	Cricetulus_griseus_crigri
ENSCHIG00000013171	CRNKL1	97	85.970	ENSCSEG00000005594	crnkl1	88	83.960	Cynoglossus_semilaevis
ENSCHIG00000013171	CRNKL1	96	86.787	ENSCVAG00000015172	crnkl1	93	84.348	Cyprinodon_variegatus
ENSCHIG00000013171	CRNKL1	96	85.952	ENSDARG00000007901	crnkl1	91	84.157	Danio_rerio
ENSCHIG00000013171	CRNKL1	99	96.788	ENSDNOG00000016226	CRNKL1	95	96.788	Dasypus_novemcinctus
ENSCHIG00000013171	CRNKL1	97	86.716	ENSDORG00000030174	-	99	86.716	Dipodomys_ordii
ENSCHIG00000013171	CRNKL1	99	94.253	ENSDORG00000000394	-	100	94.253	Dipodomys_ordii
ENSCHIG00000013171	CRNKL1	97	87.164	ENSDORG00000023724	-	99	87.164	Dipodomys_ordii
ENSCHIG00000013171	CRNKL1	97	67.794	FBgn0000377	crn	98	67.101	Drosophila_melanogaster
ENSCHIG00000013171	CRNKL1	99	83.843	ENSETEG00000003711	CRNKL1	84	83.843	Echinops_telfairi
ENSCHIG00000013171	CRNKL1	98	60.277	ENSEBUG00000013461	crnkl1	97	58.055	Eptatretus_burgeri
ENSCHIG00000013171	CRNKL1	99	97.368	ENSEASG00005002072	CRNKL1	99	97.368	Equus_asinus_asinus
ENSCHIG00000013171	CRNKL1	99	97.368	ENSECAG00000022215	CRNKL1	99	97.368	Equus_caballus
ENSCHIG00000013171	CRNKL1	99	93.886	ENSEEUG00000000413	CRNKL1	92	93.886	Erinaceus_europaeus
ENSCHIG00000013171	CRNKL1	97	84.925	ENSELUG00000015424	crnkl1	97	83.819	Esox_lucius
ENSCHIG00000013171	CRNKL1	99	97.234	ENSFCAG00000000714	CRNKL1	100	97.234	Felis_catus
ENSCHIG00000013171	CRNKL1	97	90.327	ENSFALG00000004611	CRNKL1	100	90.327	Ficedula_albicollis
ENSCHIG00000013171	CRNKL1	99	95.197	ENSFDAG00000000604	CRNKL1	100	95.197	Fukomys_damarensis
ENSCHIG00000013171	CRNKL1	97	85.884	ENSFHEG00000013163	crnkl1	89	84.470	Fundulus_heteroclitus
ENSCHIG00000013171	CRNKL1	96	85.778	ENSGMOG00000007609	crnkl1	94	84.402	Gadus_morhua
ENSCHIG00000013171	CRNKL1	99	91.971	ENSGALG00000008429	CRNKL1	99	91.971	Gallus_gallus
ENSCHIG00000013171	CRNKL1	96	86.336	ENSGAFG00000014249	crnkl1	90	84.503	Gambusia_affinis
ENSCHIG00000013171	CRNKL1	99	84.294	ENSGACG00000011852	crnkl1	93	84.294	Gasterosteus_aculeatus
ENSCHIG00000013171	CRNKL1	95	92.378	ENSGAGG00000021233	CRNKL1	100	92.378	Gopherus_agassizii
ENSCHIG00000013171	CRNKL1	99	95.488	ENSGGOG00000014176	CRNKL1	100	95.488	Gorilla_gorilla
ENSCHIG00000013171	CRNKL1	99	85.217	ENSHBUG00000005246	crnkl1	90	85.217	Haplochromis_burtoni
ENSCHIG00000013171	CRNKL1	99	95.488	ENSHGLG00000010856	CRNKL1	100	95.488	Heterocephalus_glaber_female
ENSCHIG00000013171	CRNKL1	99	95.488	ENSHGLG00100011521	CRNKL1	100	95.488	Heterocephalus_glaber_male
ENSCHIG00000013171	CRNKL1	99	83.478	ENSHCOG00000006420	crnkl1	99	83.333	Hippocampus_comes
ENSCHIG00000013171	CRNKL1	92	67.504	ENSIPUG00000000315	-	100	68.711	Ictalurus_punctatus
ENSCHIG00000013171	CRNKL1	94	87.211	ENSIPUG00000006751	crnkl1	93	85.268	Ictalurus_punctatus
ENSCHIG00000013171	CRNKL1	96	75.038	ENSIPUG00000006836	-	99	73.754	Ictalurus_punctatus
ENSCHIG00000013171	CRNKL1	99	96.507	ENSSTOG00000014747	CRNKL1	100	96.507	Ictidomys_tridecemlineatus
ENSCHIG00000013171	CRNKL1	99	95.021	ENSJJAG00000016926	Crnkl1	100	95.021	Jaculus_jaculus
ENSCHIG00000013171	CRNKL1	99	85.444	ENSKMAG00000003620	crnkl1	87	85.444	Kryptolebias_marmoratus
ENSCHIG00000013171	CRNKL1	96	71.174	ENSLBEG00000003543	crnkl1	93	70.605	Labrus_bergylta
ENSCHIG00000013171	CRNKL1	98	87.097	ENSLACG00000001129	CRNKL1	99	87.097	Latimeria_chalumnae
ENSCHIG00000013171	CRNKL1	96	88.554	ENSLOCG00000016889	crnkl1	96	86.212	Lepisosteus_oculatus
ENSCHIG00000013171	CRNKL1	99	96.948	ENSLAFG00000004512	CRNKL1	100	96.948	Loxodonta_africana
ENSCHIG00000013171	CRNKL1	99	95.488	ENSMFAG00000039893	CRNKL1	100	95.488	Macaca_fascicularis
ENSCHIG00000013171	CRNKL1	99	95.488	ENSMMUG00000007709	CRNKL1	100	95.488	Macaca_mulatta
ENSCHIG00000013171	CRNKL1	99	95.488	ENSMNEG00000037490	CRNKL1	100	95.488	Macaca_nemestrina
ENSCHIG00000013171	CRNKL1	99	95.488	ENSMLEG00000034885	CRNKL1	100	95.488	Mandrillus_leucophaeus
ENSCHIG00000013171	CRNKL1	99	84.928	ENSMAMG00000008757	crnkl1	91	84.928	Mastacembelus_armatus
ENSCHIG00000013171	CRNKL1	99	85.362	ENSMZEG00005022345	crnkl1	91	85.362	Maylandia_zebra
ENSCHIG00000013171	CRNKL1	99	91.399	ENSMGAG00000003452	CRNKL1	94	91.399	Meleagris_gallopavo
ENSCHIG00000013171	CRNKL1	99	95.785	ENSMAUG00000020764	Crnkl1	99	95.785	Mesocricetus_auratus
ENSCHIG00000013171	CRNKL1	99	95.924	ENSMICG00000006048	CRNKL1	100	95.924	Microcebus_murinus
ENSCHIG00000013171	CRNKL1	96	69.069	ENSMOCG00000004179	-	96	69.288	Microtus_ochrogaster
ENSCHIG00000013171	CRNKL1	99	88.429	ENSMOCG00000000681	-	99	88.429	Microtus_ochrogaster
ENSCHIG00000013171	CRNKL1	91	86.212	ENSMMOG00000017601	crnkl1	97	86.212	Mola_mola
ENSCHIG00000013171	CRNKL1	98	86.873	ENSMODG00000010857	-	98	86.873	Monodelphis_domestica
ENSCHIG00000013171	CRNKL1	99	91.236	ENSMODG00000005961	-	99	91.236	Monodelphis_domestica
ENSCHIG00000013171	CRNKL1	99	62.778	ENSMALG00000011211	crnkl1	90	64.629	Monopterus_albus
ENSCHIG00000013171	CRNKL1	99	96.076	MGP_CAROLIEiJ_G0024394	Crnkl1	99	96.076	Mus_caroli
ENSCHIG00000013171	CRNKL1	99	96.221	ENSMUSG00000001767	Crnkl1	99	96.221	Mus_musculus
ENSCHIG00000013171	CRNKL1	99	94.186	MGP_PahariEiJ_G0025838	Crnkl1	99	94.186	Mus_pahari
ENSCHIG00000013171	CRNKL1	99	96.076	MGP_SPRETEiJ_G0025312	Crnkl1	99	96.076	Mus_spretus
ENSCHIG00000013171	CRNKL1	99	97.089	ENSMPUG00000001226	CRNKL1	100	97.089	Mustela_putorius_furo
ENSCHIG00000013171	CRNKL1	99	96.657	ENSMLUG00000016513	CRNKL1	89	96.657	Myotis_lucifugus
ENSCHIG00000013171	CRNKL1	99	94.026	ENSNGAG00000023097	Crnkl1	100	94.026	Nannospalax_galili
ENSCHIG00000013171	CRNKL1	98	86.578	ENSNBRG00000007867	crnkl1	90	85.507	Neolamprologus_brichardi
ENSCHIG00000013171	CRNKL1	99	93.304	ENSNLEG00000009862	CRNKL1	100	93.304	Nomascus_leucogenys
ENSCHIG00000013171	CRNKL1	99	85.401	ENSMEUG00000002361	-	99	85.401	Notamacropus_eugenii
ENSCHIG00000013171	CRNKL1	97	93.881	ENSMEUG00000012167	-	100	93.881	Notamacropus_eugenii
ENSCHIG00000013171	CRNKL1	85	66.409	ENSOPRG00000009242	-	61	66.409	Ochotona_princeps
ENSCHIG00000013171	CRNKL1	99	95.197	ENSODEG00000012175	CRNKL1	100	95.197	Octodon_degus
ENSCHIG00000013171	CRNKL1	98	86.873	ENSONIG00000018728	crnkl1	89	86.873	Oreochromis_niloticus
ENSCHIG00000013171	CRNKL1	99	96.076	ENSOCUG00000015484	CRNKL1	83	96.076	Oryctolagus_cuniculus
ENSCHIG00000013171	CRNKL1	96	85.135	ENSORLG00000017240	crnkl1	94	82.615	Oryzias_latipes
ENSCHIG00000013171	CRNKL1	96	85.285	ENSORLG00020001742	crnkl1	89	85.285	Oryzias_latipes_hni
ENSCHIG00000013171	CRNKL1	96	85.285	ENSORLG00015019564	crnkl1	89	85.285	Oryzias_latipes_hsok
ENSCHIG00000013171	CRNKL1	98	84.457	ENSOMEG00000019895	crnkl1	91	84.457	Oryzias_melastigma
ENSCHIG00000013171	CRNKL1	99	96.070	ENSOGAG00000011544	CRNKL1	100	96.070	Otolemur_garnettii
ENSCHIG00000013171	CRNKL1	100	98.846	ENSOARG00000002150	CRNKL1	90	98.846	Ovis_aries
ENSCHIG00000013171	CRNKL1	98	95.735	ENSPPAG00000027847	CRNKL1	83	95.779	Pan_paniscus
ENSCHIG00000013171	CRNKL1	99	97.234	ENSPPRG00000001955	CRNKL1	100	97.234	Panthera_pardus
ENSCHIG00000013171	CRNKL1	99	97.525	ENSPTIG00000007393	CRNKL1	100	97.234	Panthera_tigris_altaica
ENSCHIG00000013171	CRNKL1	99	95.342	ENSPTRG00000030609	CRNKL1	100	95.342	Pan_troglodytes
ENSCHIG00000013171	CRNKL1	99	95.488	ENSPANG00000017420	CRNKL1	100	95.488	Papio_anubis
ENSCHIG00000013171	CRNKL1	96	83.158	ENSPKIG00000017093	crnkl1	88	82.743	Paramormyrops_kingsleyae
ENSCHIG00000013171	CRNKL1	99	91.215	ENSPSIG00000012705	CRNKL1	99	91.215	Pelodiscus_sinensis
ENSCHIG00000013171	CRNKL1	99	78.863	ENSPMGG00000006263	crnkl1	96	79.001	Periophthalmus_magnuspinnatus
ENSCHIG00000013171	CRNKL1	99	96.076	ENSPEMG00000000073	-	99	96.076	Peromyscus_maniculatus_bairdii
ENSCHIG00000013171	CRNKL1	99	81.977	ENSPMAG00000002250	crnkl1	99	81.977	Petromyzon_marinus
ENSCHIG00000013171	CRNKL1	99	93.741	ENSPCIG00000025825	CRNKL1	96	93.741	Phascolarctos_cinereus
ENSCHIG00000013171	CRNKL1	96	86.186	ENSPFOG00000005102	crnkl1	93	84.302	Poecilia_formosa
ENSCHIG00000013171	CRNKL1	96	86.186	ENSPLAG00000007288	crnkl1	90	84.180	Poecilia_latipinna
ENSCHIG00000013171	CRNKL1	96	86.336	ENSPMEG00000008865	crnkl1	93	84.448	Poecilia_mexicana
ENSCHIG00000013171	CRNKL1	96	85.886	ENSPREG00000012615	crnkl1	92	83.745	Poecilia_reticulata
ENSCHIG00000013171	CRNKL1	98	95.294	ENSPPYG00000010747	CRNKL1	81	95.342	Pongo_abelii
ENSCHIG00000013171	CRNKL1	99	91.121	ENSPCAG00000003296	CRNKL1	85	91.121	Procavia_capensis
ENSCHIG00000013171	CRNKL1	99	94.760	ENSPCOG00000017608	CRNKL1	83	94.760	Propithecus_coquereli
ENSCHIG00000013171	CRNKL1	99	97.089	ENSPVAG00000006207	CRNKL1	83	97.089	Pteropus_vampyrus
ENSCHIG00000013171	CRNKL1	98	86.283	ENSPNYG00000001977	crnkl1	90	85.217	Pundamilia_nyererei
ENSCHIG00000013171	CRNKL1	99	86.047	ENSPNAG00000001507	crnkl1	97	84.389	Pygocentrus_nattereri
ENSCHIG00000013171	CRNKL1	99	95.785	ENSRNOG00000040045	Crnkl1	99	95.785	Rattus_norvegicus
ENSCHIG00000013171	CRNKL1	99	96.221	ENSRNOG00000010587	Crnkl1	99	96.221	Rattus_norvegicus
ENSCHIG00000013171	CRNKL1	99	95.488	ENSRBIG00000031770	CRNKL1	100	95.488	Rhinopithecus_bieti
ENSCHIG00000013171	CRNKL1	99	95.342	ENSRROG00000040450	CRNKL1	100	95.342	Rhinopithecus_roxellana
ENSCHIG00000013171	CRNKL1	93	37.681	YLR117C	CLF1	99	37.771	Saccharomyces_cerevisiae
ENSCHIG00000013171	CRNKL1	99	95.488	ENSSBOG00000029672	CRNKL1	100	95.488	Saimiri_boliviensis_boliviensis
ENSCHIG00000013171	CRNKL1	95	73.900	ENSSHAG00000011199	CRNKL1	99	73.900	Sarcophilus_harrisii
ENSCHIG00000013171	CRNKL1	96	87.009	ENSSFOG00015000946	crnkl1	88	86.115	Scleropages_formosus
ENSCHIG00000013171	CRNKL1	99	84.402	ENSSMAG00000007933	crnkl1	89	83.936	Scophthalmus_maximus
ENSCHIG00000013171	CRNKL1	99	79.740	ENSSDUG00000012625	crnkl1	88	79.740	Seriola_dumerili
ENSCHIG00000013171	CRNKL1	99	85.217	ENSSLDG00000021413	crnkl1	89	85.217	Seriola_lalandi_dorsalis
ENSCHIG00000013171	CRNKL1	99	95.779	ENSSARG00000006443	CRNKL1	82	95.779	Sorex_araneus
ENSCHIG00000013171	CRNKL1	98	92.082	ENSSPUG00000005254	CRNKL1	99	92.082	Sphenodon_punctatus
ENSCHIG00000013171	CRNKL1	99	85.260	ENSSPAG00000016150	crnkl1	89	85.260	Stegastes_partitus
ENSCHIG00000013171	CRNKL1	99	97.543	ENSSSCG00000038587	CRNKL1	99	97.543	Sus_scrofa
ENSCHIG00000013171	CRNKL1	99	90.816	ENSTGUG00000007645	CRNKL1	98	90.816	Taeniopygia_guttata
ENSCHIG00000013171	CRNKL1	99	77.966	ENSTRUG00000015417	crnkl1	91	79.738	Takifugu_rubripes
ENSCHIG00000013171	CRNKL1	96	85.157	ENSTNIG00000010710	crnkl1	99	83.599	Tetraodon_nigroviridis
ENSCHIG00000013171	CRNKL1	90	95.680	ENSTBEG00000001304	CRNKL1	82	95.728	Tupaia_belangeri
ENSCHIG00000013171	CRNKL1	90	93.760	ENSTTRG00000000484	CRNKL1	81	93.829	Tursiops_truncatus
ENSCHIG00000013171	CRNKL1	99	97.234	ENSUAMG00000018586	CRNKL1	100	97.234	Ursus_americanus
ENSCHIG00000013171	CRNKL1	99	97.234	ENSUMAG00000024957	CRNKL1	100	97.234	Ursus_maritimus
ENSCHIG00000013171	CRNKL1	99	97.089	ENSVVUG00000012559	CRNKL1	82	97.089	Vulpes_vulpes
ENSCHIG00000013171	CRNKL1	98	90.630	ENSXETG00000009698	crnkl1	99	90.630	Xenopus_tropicalis
ENSCHIG00000013171	CRNKL1	96	86.807	ENSXCOG00000000824	crnkl1	92	84.884	Xiphophorus_couchianus
ENSCHIG00000013171	CRNKL1	96	86.336	ENSXMAG00000006896	crnkl1	92	84.425	Xiphophorus_maculatus