EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000013569 (Gene tree)
Gene ID: 102176952
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 8655 bases
Position: chr7:97838136-97846790
Accession: 102176952
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000011419	zf-CCCH	PF00642.24	3.1e-05	1	1
ENSCHIP00000011419	TRM	PF02005.16	4.7e-149	1	1
ENSCHIP00000011419	Met_10	PF02475.16	3.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000019208	TRMT1-201	1992	XM_005682269	ENSCHIP00000011419	663 (aa)	XP_005682326	UPI000D18E7D8

Gene Model

Click here to download ENSCHIG00000013569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000013569's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000013569	TRMT1	97	88.180	ENSG00000104907	TRMT1	100	93.750	Homo_sapiens
ENSCHIG00000013569	TRMT1	100	88.235	ENSAMEG00000012598	TRMT1	99	88.235	Ailuropoda_melanoleuca
ENSCHIG00000013569	TRMT1	92	56.121	ENSACIG00000018680	trmt1	96	56.121	Amphilophus_citrinellus
ENSCHIG00000013569	TRMT1	87	65.690	ENSAOCG00000006781	trmt1	86	65.690	Amphiprion_ocellaris
ENSCHIG00000013569	TRMT1	87	65.690	ENSAPEG00000007712	trmt1	86	65.690	Amphiprion_percula
ENSCHIG00000013569	TRMT1	87	67.814	ENSATEG00000001872	trmt1	84	67.814	Anabas_testudineus
ENSCHIG00000013569	TRMT1	89	67.780	ENSACAG00000003825	TRMT1	96	67.780	Anolis_carolinensis
ENSCHIG00000013569	TRMT1	98	82.462	ENSANAG00000023016	TRMT1	98	85.179	Aotus_nancymaae
ENSCHIG00000013569	TRMT1	94	60.809	ENSACLG00000010073	trmt1	98	60.809	Astatotilapia_calliptera
ENSCHIG00000013569	TRMT1	87	66.838	ENSAMXG00000012026	trmt1	86	66.838	Astyanax_mexicanus
ENSCHIG00000013569	TRMT1	100	97.587	ENSBTAG00000019325	TRMT1	94	97.587	Bos_taurus
ENSCHIG00000013569	TRMT1	77	40.535	WBGene00006613	trm-1	93	40.535	Caenorhabditis_elegans
ENSCHIG00000013569	TRMT1	97	82.844	ENSCJAG00000004566	TRMT1	99	82.844	Callithrix_jacchus
ENSCHIG00000013569	TRMT1	100	88.386	ENSCAFG00000017070	TRMT1	100	89.342	Canis_familiaris
ENSCHIG00000013569	TRMT1	99	87.615	ENSCAFG00020005397	TRMT1	100	84.615	Canis_lupus_dingo
ENSCHIG00000013569	TRMT1	97	81.860	ENSTSYG00000003207	TRMT1	99	81.611	Carlito_syrichta
ENSCHIG00000013569	TRMT1	85	79.613	ENSCAPG00000003355	TRMT1	99	79.613	Cavia_aperea
ENSCHIG00000013569	TRMT1	99	81.763	ENSCPOG00000011754	TRMT1	99	81.763	Cavia_porcellus
ENSCHIG00000013569	TRMT1	98	80.858	ENSCCAG00000022263	TRMT1	98	84.502	Cebus_capucinus
ENSCHIG00000013569	TRMT1	100	86.878	ENSCATG00000039850	TRMT1	100	86.878	Cercocebus_atys
ENSCHIG00000013569	TRMT1	84	72.996	ENSCATG00000038220	-	98	72.996	Cercocebus_atys
ENSCHIG00000013569	TRMT1	98	84.923	ENSCLAG00000015295	TRMT1	96	84.923	Chinchilla_lanigera
ENSCHIG00000013569	TRMT1	80	88.512	ENSCSAG00000006500	TRMT1	100	88.512	Chlorocebus_sabaeus
ENSCHIG00000013569	TRMT1	89	70.628	ENSCPBG00000023866	TRMT1	87	70.777	Chrysemys_picta_bellii
ENSCHIG00000013569	TRMT1	83	45.144	ENSCING00000002884	-	97	45.144	Ciona_intestinalis
ENSCHIG00000013569	TRMT1	83	45.063	ENSCSAVG00000010927	-	100	45.826	Ciona_savignyi
ENSCHIG00000013569	TRMT1	98	70.948	ENSCANG00000040631	TRMT1	99	70.948	Colobus_angolensis_palliatus
ENSCHIG00000013569	TRMT1	95	67.727	ENSCANG00000031650	-	98	67.757	Colobus_angolensis_palliatus
ENSCHIG00000013569	TRMT1	99	82.246	ENSCGRG00001022594	Trmt1	99	82.246	Cricetulus_griseus_chok1gshd
ENSCHIG00000013569	TRMT1	99	82.246	ENSCGRG00000017732	Trmt1	99	82.246	Cricetulus_griseus_crigri
ENSCHIG00000013569	TRMT1	92	64.368	ENSCSEG00000001643	trmt1	88	66.605	Cynoglossus_semilaevis
ENSCHIG00000013569	TRMT1	89	66.164	ENSCVAG00000011886	trmt1	88	66.164	Cyprinodon_variegatus
ENSCHIG00000013569	TRMT1	94	61.077	ENSDARG00000010978	trmt1	95	61.290	Danio_rerio
ENSCHIG00000013569	TRMT1	84	62.567	ENSDNOG00000048240	-	95	62.567	Dasypus_novemcinctus
ENSCHIG00000013569	TRMT1	99	81.791	ENSDORG00000014298	Trmt1	99	81.791	Dipodomys_ordii
ENSCHIG00000013569	TRMT1	77	48.456	FBgn0032430	CG6388	87	48.456	Drosophila_melanogaster
ENSCHIG00000013569	TRMT1	54	81.724	ENSETEG00000015483	-	54	81.724	Echinops_telfairi
ENSCHIG00000013569	TRMT1	78	52.896	ENSEBUG00000003449	trmt1	76	52.762	Eptatretus_burgeri
ENSCHIG00000013569	TRMT1	94	87.200	ENSEASG00005004050	TRMT1	100	86.677	Equus_asinus_asinus
ENSCHIG00000013569	TRMT1	94	87.520	ENSECAG00000016149	TRMT1	100	86.991	Equus_caballus
ENSCHIG00000013569	TRMT1	60	71.608	ENSEEUG00000014102	-	100	71.608	Erinaceus_europaeus
ENSCHIG00000013569	TRMT1	86	66.378	ENSELUG00000021659	trmt1	85	66.378	Esox_lucius
ENSCHIG00000013569	TRMT1	99	86.798	ENSFCAG00000000483	TRMT1	99	86.798	Felis_catus
ENSCHIG00000013569	TRMT1	99	82.353	ENSFDAG00000007386	TRMT1	99	82.353	Fukomys_damarensis
ENSCHIG00000013569	TRMT1	82	68.081	ENSFHEG00000012865	trmt1	89	68.081	Fundulus_heteroclitus
ENSCHIG00000013569	TRMT1	88	60.757	ENSGMOG00000006564	trmt1	99	61.446	Gadus_morhua
ENSCHIG00000013569	TRMT1	87	66.610	ENSGAFG00000011862	trmt1	90	66.781	Gambusia_affinis
ENSCHIG00000013569	TRMT1	88	62.969	ENSGACG00000000227	trmt1	94	63.543	Gasterosteus_aculeatus
ENSCHIG00000013569	TRMT1	94	66.977	ENSGAGG00000016432	TRMT1	93	66.977	Gopherus_agassizii
ENSCHIG00000013569	TRMT1	97	88.180	ENSGGOG00000014007	TRMT1	99	87.805	Gorilla_gorilla
ENSCHIG00000013569	TRMT1	84	58.897	ENSHBUG00000008821	trmt1	92	58.897	Haplochromis_burtoni
ENSCHIG00000013569	TRMT1	99	82.701	ENSHGLG00000015972	TRMT1	99	82.701	Heterocephalus_glaber_female
ENSCHIG00000013569	TRMT1	99	76.783	ENSHGLG00100018112	TRMT1	99	76.783	Heterocephalus_glaber_male
ENSCHIG00000013569	TRMT1	87	63.826	ENSHCOG00000009447	trmt1	88	63.826	Hippocampus_comes
ENSCHIG00000013569	TRMT1	86	65.299	ENSIPUG00000002899	trmt1	85	65.299	Ictalurus_punctatus
ENSCHIG00000013569	TRMT1	100	86.145	ENSSTOG00000012531	TRMT1	100	86.145	Ictidomys_tridecemlineatus
ENSCHIG00000013569	TRMT1	95	82.698	ENSJJAG00000017154	Trmt1	100	80.301	Jaculus_jaculus
ENSCHIG00000013569	TRMT1	89	65.101	ENSKMAG00000011809	trmt1	98	65.101	Kryptolebias_marmoratus
ENSCHIG00000013569	TRMT1	91	64.892	ENSLBEG00000012703	trmt1	87	64.892	Labrus_bergylta
ENSCHIG00000013569	TRMT1	86	57.686	ENSLACG00000014585	TRMT1	99	55.863	Latimeria_chalumnae
ENSCHIG00000013569	TRMT1	73	70.747	ENSLOCG00000006479	trmt1	97	63.058	Lepisosteus_oculatus
ENSCHIG00000013569	TRMT1	98	86.524	ENSLAFG00000014072	TRMT1	100	86.524	Loxodonta_africana
ENSCHIG00000013569	TRMT1	100	87.029	ENSMFAG00000033143	TRMT1	100	87.029	Macaca_fascicularis
ENSCHIG00000013569	TRMT1	99	80.670	ENSMMUG00000001167	TRMT1	100	80.670	Macaca_mulatta
ENSCHIG00000013569	TRMT1	100	87.029	ENSMNEG00000037867	TRMT1	100	87.029	Macaca_nemestrina
ENSCHIG00000013569	TRMT1	99	86.738	ENSMLEG00000016142	TRMT1	99	86.738	Mandrillus_leucophaeus
ENSCHIG00000013569	TRMT1	93	63.233	ENSMAMG00000004357	trmt1	94	63.233	Mastacembelus_armatus
ENSCHIG00000013569	TRMT1	91	62.600	ENSMZEG00005014510	trmt1	92	62.600	Maylandia_zebra
ENSCHIG00000013569	TRMT1	98	82.642	ENSMAUG00000011134	Trmt1	100	81.381	Mesocricetus_auratus
ENSCHIG00000013569	TRMT1	100	86.878	ENSMICG00000000793	TRMT1	100	86.878	Microcebus_murinus
ENSCHIG00000013569	TRMT1	98	82.743	ENSMOCG00000015895	Trmt1	100	81.409	Microtus_ochrogaster
ENSCHIG00000013569	TRMT1	86	65.909	ENSMMOG00000011097	trmt1	92	65.909	Mola_mola
ENSCHIG00000013569	TRMT1	93	75.402	ENSMODG00000011619	TRMT1	100	75.402	Monodelphis_domestica
ENSCHIG00000013569	TRMT1	100	81.709	MGP_CAROLIEiJ_G0031304	Trmt1	100	82.890	Mus_caroli
ENSCHIG00000013569	TRMT1	100	81.709	ENSMUSG00000001909	Trmt1	100	82.510	Mus_musculus
ENSCHIG00000013569	TRMT1	100	81.709	MGP_SPRETEiJ_G0032422	Trmt1	100	82.129	Mus_spretus
ENSCHIG00000013569	TRMT1	100	87.934	ENSMPUG00000004210	TRMT1	95	87.934	Mustela_putorius_furo
ENSCHIG00000013569	TRMT1	100	86.576	ENSMLUG00000012809	TRMT1	99	86.576	Myotis_lucifugus
ENSCHIG00000013569	TRMT1	97	82.198	ENSNGAG00000022486	Trmt1	97	82.198	Nannospalax_galili
ENSCHIG00000013569	TRMT1	75	67.262	ENSNBRG00000024376	trmt1	85	67.262	Neolamprologus_brichardi
ENSCHIG00000013569	TRMT1	78	85.629	ENSNLEG00000013019	-	99	85.629	Nomascus_leucogenys
ENSCHIG00000013569	TRMT1	90	75.960	ENSMEUG00000013756	TRMT1	100	75.960	Notamacropus_eugenii
ENSCHIG00000013569	TRMT1	82	84.787	ENSOPRG00000009471	-	82	84.787	Ochotona_princeps
ENSCHIG00000013569	TRMT1	99	83.817	ENSODEG00000010323	TRMT1	99	83.817	Octodon_degus
ENSCHIG00000013569	TRMT1	94	64.444	ENSONIG00000000400	trmt1	100	64.444	Oreochromis_niloticus
ENSCHIG00000013569	TRMT1	79	88.550	ENSOCUG00000021934	TRMT1	99	88.550	Oryctolagus_cuniculus
ENSCHIG00000013569	TRMT1	86	61.856	ENSORLG00000020074	trmt1	90	61.856	Oryzias_latipes
ENSCHIG00000013569	TRMT1	87	64.767	ENSORLG00020007561	trmt1	90	64.767	Oryzias_latipes_hni
ENSCHIG00000013569	TRMT1	87	65.112	ENSORLG00015006547	trmt1	87	65.112	Oryzias_latipes_hsok
ENSCHIG00000013569	TRMT1	91	62.013	ENSOMEG00000019343	trmt1	93	62.013	Oryzias_melastigma
ENSCHIG00000013569	TRMT1	94	84.751	ENSOGAG00000025576	TRMT1	97	84.751	Otolemur_garnettii
ENSCHIG00000013569	TRMT1	100	81.859	ENSOARG00000009397	TRMT1	94	82.309	Ovis_aries
ENSCHIG00000013569	TRMT1	98	79.570	ENSPPRG00000012117	TRMT1	100	79.570	Panthera_pardus
ENSCHIG00000013569	TRMT1	76	90.274	ENSPTIG00000008833	TRMT1	97	90.274	Panthera_tigris_altaica
ENSCHIG00000013569	TRMT1	97	65.736	ENSPTRG00000050421	-	98	65.736	Pan_troglodytes
ENSCHIG00000013569	TRMT1	97	88.180	ENSPTRG00000010557	TRMT1	99	87.805	Pan_troglodytes
ENSCHIG00000013569	TRMT1	85	72.708	ENSPANG00000034058	-	96	72.708	Papio_anubis
ENSCHIG00000013569	TRMT1	99	87.215	ENSPANG00000009247	TRMT1	99	87.215	Papio_anubis
ENSCHIG00000013569	TRMT1	92	64.706	ENSPKIG00000005309	trmt1	89	64.706	Paramormyrops_kingsleyae
ENSCHIG00000013569	TRMT1	82	61.624	ENSPSIG00000008762	TRMT1	78	61.624	Pelodiscus_sinensis
ENSCHIG00000013569	TRMT1	91	64.026	ENSPMGG00000019764	trmt1	94	64.026	Periophthalmus_magnuspinnatus
ENSCHIG00000013569	TRMT1	97	84.806	ENSPEMG00000016247	Trmt1	100	82.759	Peromyscus_maniculatus_bairdii
ENSCHIG00000013569	TRMT1	88	59.520	ENSPMAG00000004329	trmt1	91	59.520	Petromyzon_marinus
ENSCHIG00000013569	TRMT1	97	73.344	ENSPCIG00000019273	TRMT1	99	73.344	Phascolarctos_cinereus
ENSCHIG00000013569	TRMT1	88	68.034	ENSPFOG00000008527	trmt1	89	68.034	Poecilia_formosa
ENSCHIG00000013569	TRMT1	88	67.747	ENSPLAG00000018788	trmt1	89	70.245	Poecilia_latipinna
ENSCHIG00000013569	TRMT1	88	67.863	ENSPMEG00000013120	trmt1	89	67.863	Poecilia_mexicana
ENSCHIG00000013569	TRMT1	86	67.539	ENSPREG00000000211	trmt1	85	67.714	Poecilia_reticulata
ENSCHIG00000013569	TRMT1	97	87.714	ENSPPYG00000009622	TRMT1	99	87.348	Pongo_abelii
ENSCHIG00000013569	TRMT1	99	77.508	ENSPCAG00000003698	TRMT1	99	77.508	Procavia_capensis
ENSCHIG00000013569	TRMT1	99	86.718	ENSPCOG00000008653	TRMT1	99	86.718	Propithecus_coquereli
ENSCHIG00000013569	TRMT1	99	87.805	ENSPVAG00000015076	TRMT1	99	87.805	Pteropus_vampyrus
ENSCHIG00000013569	TRMT1	87	63.542	ENSPNYG00000013960	trmt1	92	63.542	Pundamilia_nyererei
ENSCHIG00000013569	TRMT1	81	67.842	ENSPNAG00000024859	trmt1	89	67.842	Pygocentrus_nattereri
ENSCHIG00000013569	TRMT1	96	82.555	ENSRNOG00000002914	Trmt1	100	82.555	Rattus_norvegicus
ENSCHIG00000013569	TRMT1	95	67.250	ENSRBIG00000037505	-	99	67.134	Rhinopithecus_bieti
ENSCHIG00000013569	TRMT1	100	86.425	ENSRBIG00000038324	TRMT1	100	86.425	Rhinopithecus_bieti
ENSCHIG00000013569	TRMT1	100	86.275	ENSRROG00000028599	TRMT1	100	86.275	Rhinopithecus_roxellana
ENSCHIG00000013569	TRMT1	95	66.773	ENSRROG00000031847	-	98	66.667	Rhinopithecus_roxellana
ENSCHIG00000013569	TRMT1	77	37.058	YDR120C	-	92	37.291	Saccharomyces_cerevisiae
ENSCHIG00000013569	TRMT1	98	82.083	ENSSBOG00000028861	TRMT1	98	84.992	Saimiri_boliviensis_boliviensis
ENSCHIG00000013569	TRMT1	89	77.041	ENSSHAG00000014381	TRMT1	100	74.799	Sarcophilus_harrisii
ENSCHIG00000013569	TRMT1	88	67.298	ENSSFOG00015004139	trmt1	85	67.298	Scleropages_formosus
ENSCHIG00000013569	TRMT1	86	65.976	ENSSMAG00000021136	trmt1	85	65.976	Scophthalmus_maximus
ENSCHIG00000013569	TRMT1	88	66.105	ENSSDUG00000012740	trmt1	86	66.105	Seriola_dumerili
ENSCHIG00000013569	TRMT1	88	65.936	ENSSLDG00000005971	trmt1	86	65.936	Seriola_lalandi_dorsalis
ENSCHIG00000013569	TRMT1	86	84.183	ENSSARG00000005138	TRMT1	100	84.183	Sorex_araneus
ENSCHIG00000013569	TRMT1	90	54.833	ENSSPUG00000001084	TRMT1	93	55.167	Sphenodon_punctatus
ENSCHIG00000013569	TRMT1	89	64.094	ENSSPAG00000007153	trmt1	97	64.094	Stegastes_partitus
ENSCHIG00000013569	TRMT1	96	91.862	ENSSSCG00000013744	TRMT1	100	91.862	Sus_scrofa
ENSCHIG00000013569	TRMT1	89	61.231	ENSTRUG00000010700	trmt1	89	61.231	Takifugu_rubripes
ENSCHIG00000013569	TRMT1	86	65.854	ENSTNIG00000018808	trmt1	98	65.854	Tetraodon_nigroviridis
ENSCHIG00000013569	TRMT1	97	88.647	ENSTTRG00000006379	TRMT1	99	87.976	Tursiops_truncatus
ENSCHIG00000013569	TRMT1	98	88.479	ENSUAMG00000022911	TRMT1	99	88.479	Ursus_americanus
ENSCHIG00000013569	TRMT1	96	88.715	ENSUMAG00000006027	TRMT1	100	88.715	Ursus_maritimus
ENSCHIG00000013569	TRMT1	100	88.537	ENSVVUG00000024177	TRMT1	100	88.537	Vulpes_vulpes
ENSCHIG00000013569	TRMT1	70	72.078	ENSXETG00000033863	TRMT1	92	72.078	Xenopus_tropicalis
ENSCHIG00000013569	TRMT1	88	67.521	ENSXCOG00000015733	trmt1	89	67.692	Xiphophorus_couchianus
ENSCHIG00000013569	TRMT1	86	67.657	ENSXMAG00000013823	trmt1	97	67.657	Xiphophorus_maculatus