EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000013730 (Gene tree)
Gene ID: 102190445
Gene Symbol: -
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 34075 bases
Position: chr17:56604399-56638473
Accession: 102190445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000011693	ResIII	PF04851.15	8.1e-11	1	1
ENSCHIP00000011693	DEAD	PF00270.29	4.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000019483	-	3159	XM_018061569	ENSCHIP00000011693	1052 (aa)	XP_017917058	UPI0005FBEA34

Gene Model

Click here to download ENSCHIG00000013730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000013730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000013730	-	54	42.367	ENSCHIG00000013871	CHD1L	62	42.261
ENSCHIG00000013730	-	100	98.289	ENSCHIG00000016375	-	100	98.289
ENSCHIG00000013730	-	93	85.729	ENSCHIG00000009837	SMARCA1	97	83.008

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000013730	-	100	98.669	ENSG00000153147	SMARCA5	100	98.669	Homo_sapiens
ENSCHIG00000013730	-	100	99.430	ENSAMEG00000009585	SMARCA5	100	99.430	Ailuropoda_melanoleuca
ENSCHIG00000013730	-	91	96.920	ENSAPLG00000009206	SMARCA5	100	96.920	Anas_platyrhynchos
ENSCHIG00000013730	-	98	93.919	ENSACAG00000003038	SMARCA5	99	93.919	Anolis_carolinensis
ENSCHIG00000013730	-	100	98.574	ENSANAG00000019345	SMARCA5	100	98.574	Aotus_nancymaae
ENSCHIG00000013730	-	100	99.525	ENSBTAG00000003399	SMARCA5	100	99.525	Bos_taurus
ENSCHIG00000013730	-	100	98.764	ENSCJAG00000002735	SMARCA5	100	98.764	Callithrix_jacchus
ENSCHIG00000013730	-	100	99.049	ENSCAFG00000007525	SMARCA5	100	99.049	Canis_familiaris
ENSCHIG00000013730	-	98	99.031	ENSCAFG00020025641	SMARCA5	99	99.031	Canis_lupus_dingo
ENSCHIG00000013730	-	99	95.889	ENSTSYG00000009954	SMARCA5	99	99.698	Carlito_syrichta
ENSCHIG00000013730	-	92	99.174	ENSCAPG00000013747	SMARCA5	95	99.174	Cavia_aperea
ENSCHIG00000013730	-	100	97.814	ENSCPOG00000002259	SMARCA5	100	97.814	Cavia_porcellus
ENSCHIG00000013730	-	100	98.764	ENSCCAG00000027215	SMARCA5	100	98.764	Cebus_capucinus
ENSCHIG00000013730	-	100	98.764	ENSCATG00000044917	SMARCA5	100	98.764	Cercocebus_atys
ENSCHIG00000013730	-	94	99.396	ENSCLAG00000006153	SMARCA5	100	99.396	Chinchilla_lanigera
ENSCHIG00000013730	-	92	99.587	ENSCSAG00000003448	SMARCA5	100	99.587	Chlorocebus_sabaeus
ENSCHIG00000013730	-	90	98.519	ENSCHOG00000011724	SMARCA5	90	98.519	Choloepus_hoffmanni
ENSCHIG00000013730	-	96	96.090	ENSCPBG00000027535	SMARCA5	97	97.241	Chrysemys_picta_bellii
ENSCHIG00000013730	-	100	98.574	ENSCANG00000041629	SMARCA5	100	98.574	Colobus_angolensis_palliatus
ENSCHIG00000013730	-	99	98.004	ENSCGRG00001012719	Smarca5	99	98.004	Cricetulus_griseus_chok1gshd
ENSCHIG00000013730	-	95	99.298	ENSCGRG00000001417	Smarca5	99	99.496	Cricetulus_griseus_crigri
ENSCHIG00000013730	-	98	95.841	ENSDNOG00000009158	SMARCA5	97	96.271	Dasypus_novemcinctus
ENSCHIG00000013730	-	90	90.928	ENSDORG00000003466	Smarca5	97	90.928	Dipodomys_ordii
ENSCHIG00000013730	-	98	81.704	ENSEBUG00000014773	SMARCA5	96	85.744	Eptatretus_burgeri
ENSCHIG00000013730	-	100	99.240	ENSEASG00005001866	SMARCA5	100	99.240	Equus_asinus_asinus
ENSCHIG00000013730	-	100	99.240	ENSECAG00000002676	SMARCA5	100	99.240	Equus_caballus
ENSCHIG00000013730	-	94	95.166	ENSEEUG00000013176	SMARCA5	100	95.166	Erinaceus_europaeus
ENSCHIG00000013730	-	92	89.278	ENSELUG00000014653	SMARCA5	99	89.278	Esox_lucius
ENSCHIG00000013730	-	100	99.525	ENSFCAG00000004544	SMARCA5	100	99.525	Felis_catus
ENSCHIG00000013730	-	92	97.526	ENSFALG00000004987	SMARCA5	100	97.526	Ficedula_albicollis
ENSCHIG00000013730	-	99	95.802	ENSFDAG00000021016	SMARCA5	100	99.597	Fukomys_damarensis
ENSCHIG00000013730	-	99	84.851	ENSGMOG00000007519	SMARCA5	98	86.627	Gadus_morhua
ENSCHIG00000013730	-	97	96.271	ENSGALG00000009913	SMARCA5	98	96.275	Gallus_gallus
ENSCHIG00000013730	-	93	90.686	ENSGACG00000017238	SMARCA5	95	90.686	Gasterosteus_aculeatus
ENSCHIG00000013730	-	96	97.340	ENSGAGG00000019882	SMARCA5	97	97.340	Gopherus_agassizii
ENSCHIG00000013730	-	100	98.669	ENSGGOG00000012595	SMARCA5	100	98.669	Gorilla_gorilla
ENSCHIG00000013730	-	96	89.552	ENSHGLG00000000317	-	97	88.856	Heterocephalus_glaber_female
ENSCHIG00000013730	-	100	97.814	ENSHGLG00000000816	-	99	97.814	Heterocephalus_glaber_female
ENSCHIG00000013730	-	96	97.923	ENSHGLG00100018421	-	100	99.496	Heterocephalus_glaber_male
ENSCHIG00000013730	-	100	98.765	ENSSTOG00000010683	SMARCA5	99	98.765	Ictidomys_tridecemlineatus
ENSCHIG00000013730	-	100	98.004	ENSJJAG00000014965	Smarca5	100	98.004	Jaculus_jaculus
ENSCHIG00000013730	-	94	96.049	ENSLACG00000007091	SMARCA5	97	96.049	Latimeria_chalumnae
ENSCHIG00000013730	-	94	92.386	ENSLOCG00000008966	SMARCA5	98	90.693	Lepisosteus_oculatus
ENSCHIG00000013730	-	100	98.669	ENSLAFG00000007795	SMARCA5	100	98.669	Loxodonta_africana
ENSCHIG00000013730	-	100	98.764	ENSMFAG00000043649	SMARCA5	100	98.764	Macaca_fascicularis
ENSCHIG00000013730	-	100	98.764	ENSMMUG00000000829	SMARCA5	100	98.764	Macaca_mulatta
ENSCHIG00000013730	-	100	98.764	ENSMNEG00000031916	SMARCA5	100	98.764	Macaca_nemestrina
ENSCHIG00000013730	-	100	98.764	ENSMLEG00000042393	SMARCA5	100	98.764	Mandrillus_leucophaeus
ENSCHIG00000013730	-	96	96.624	ENSMGAG00000003517	SMARCA5	100	96.624	Meleagris_gallopavo
ENSCHIG00000013730	-	94	99.597	ENSMAUG00000015902	Smarca5	98	99.597	Mesocricetus_auratus
ENSCHIG00000013730	-	100	98.954	ENSMICG00000003971	SMARCA5	100	98.954	Microcebus_murinus
ENSCHIG00000013730	-	99	97.624	ENSMOCG00000016986	-	99	97.624	Microtus_ochrogaster
ENSCHIG00000013730	-	100	96.019	ENSMODG00000000391	SMARCA5	96	98.028	Monodelphis_domestica
ENSCHIG00000013730	-	100	98.004	ENSMUSG00000031715	Smarca5	100	98.004	Mus_musculus
ENSCHIG00000013730	-	100	98.099	MGP_PahariEiJ_G0022862	Smarca5	100	98.099	Mus_pahari
ENSCHIG00000013730	-	100	99.144	ENSMLUG00000000468	SMARCA5	100	99.144	Myotis_lucifugus
ENSCHIG00000013730	-	100	97.909	ENSNGAG00000000441	Smarca5	100	97.909	Nannospalax_galili
ENSCHIG00000013730	-	100	98.764	ENSNLEG00000005383	SMARCA5	100	98.764	Nomascus_leucogenys
ENSCHIG00000013730	-	92	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSCHIG00000013730	-	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSCHIG00000013730	-	92	99.174	ENSOANG00000013921	SMARCA5	100	99.174	Ornithorhynchus_anatinus
ENSCHIG00000013730	-	92	99.794	ENSOCUG00000013042	SMARCA5	100	99.794	Oryctolagus_cuniculus
ENSCHIG00000013730	-	100	98.954	ENSOGAG00000009702	SMARCA5	100	98.954	Otolemur_garnettii
ENSCHIG00000013730	-	99	99.715	ENSOARG00000010589	SMARCA5	99	99.715	Ovis_aries
ENSCHIG00000013730	-	100	98.479	ENSPPAG00000028523	SMARCA5	100	98.479	Pan_paniscus
ENSCHIG00000013730	-	98	93.866	ENSPPRG00000004925	SMARCA5	97	94.799	Panthera_pardus
ENSCHIG00000013730	-	96	99.703	ENSPTIG00000020959	SMARCA5	97	99.703	Panthera_tigris_altaica
ENSCHIG00000013730	-	100	98.574	ENSPTRG00000016472	SMARCA5	100	98.574	Pan_troglodytes
ENSCHIG00000013730	-	100	98.764	ENSPANG00000001175	SMARCA5	100	98.764	Papio_anubis
ENSCHIG00000013730	-	95	89.500	ENSPKIG00000015885	SMARCA5	100	91.340	Paramormyrops_kingsleyae
ENSCHIG00000013730	-	93	90.881	ENSPKIG00000015699	SMARCA5	98	89.835	Paramormyrops_kingsleyae
ENSCHIG00000013730	-	95	96.189	ENSPSIG00000004177	SMARCA5	100	96.189	Pelodiscus_sinensis
ENSCHIG00000013730	-	92	90.021	ENSPMGG00000012316	SMARCA5	100	90.021	Periophthalmus_magnuspinnatus
ENSCHIG00000013730	-	97	97.839	ENSPEMG00000008060	Smarca5	99	97.839	Peromyscus_maniculatus_bairdii
ENSCHIG00000013730	-	96	69.676	ENSPMAG00000006011	SMARCA5	83	83.642	Petromyzon_marinus
ENSCHIG00000013730	-	61	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSCHIG00000013730	-	99	96.246	ENSPCIG00000003926	SMARCA5	97	97.544	Phascolarctos_cinereus
ENSCHIG00000013730	-	100	98.669	ENSPPYG00000015091	SMARCA5	100	98.669	Pongo_abelii
ENSCHIG00000013730	-	86	90.541	ENSPCAG00000014230	SMARCA5	88	90.783	Procavia_capensis
ENSCHIG00000013730	-	100	96.293	ENSPCOG00000026744	SMARCA5	100	96.293	Propithecus_coquereli
ENSCHIG00000013730	-	99	98.953	ENSPVAG00000006482	SMARCA5	100	98.953	Pteropus_vampyrus
ENSCHIG00000013730	-	97	88.137	ENSPNAG00000027824	SMARCA5	97	90.456	Pygocentrus_nattereri
ENSCHIG00000013730	-	95	99.397	ENSRNOG00000018149	Smarca5	100	99.397	Rattus_norvegicus
ENSCHIG00000013730	-	100	98.575	ENSRBIG00000044644	SMARCA5	100	98.575	Rhinopithecus_bieti
ENSCHIG00000013730	-	98	98.451	ENSRROG00000029591	SMARCA5	99	99.396	Rhinopithecus_roxellana
ENSCHIG00000013730	-	100	98.669	ENSSBOG00000036257	SMARCA5	100	98.669	Saimiri_boliviensis_boliviensis
ENSCHIG00000013730	-	94	99.094	ENSSHAG00000008464	SMARCA5	100	99.094	Sarcophilus_harrisii
ENSCHIG00000013730	-	94	90.352	ENSSFOG00015013252	SMARCA5	97	90.352	Scleropages_formosus
ENSCHIG00000013730	-	99	93.167	ENSSPUG00000007604	SMARCA5	99	96.583	Sphenodon_punctatus
ENSCHIG00000013730	-	100	98.954	ENSSSCG00000009047	SMARCA5	100	98.954	Sus_scrofa
ENSCHIG00000013730	-	96	96.032	ENSTGUG00000002408	SMARCA5	100	96.032	Taeniopygia_guttata
ENSCHIG00000013730	-	98	99.225	ENSUAMG00000023495	SMARCA5	99	99.225	Ursus_americanus
ENSCHIG00000013730	-	95	99.801	ENSUMAG00000015324	SMARCA5	97	99.801	Ursus_maritimus
ENSCHIG00000013730	-	100	99.049	ENSVPAG00000008982	SMARCA5	100	99.049	Vicugna_pacos
ENSCHIG00000013730	-	100	99.240	ENSVVUG00000017473	SMARCA5	100	99.240	Vulpes_vulpes
ENSCHIG00000013730	-	95	88.756	ENSXETG00000017566	smarca5	97	91.511	Xenopus_tropicalis