EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000013742 (Gene tree)
Gene ID: 102175687
Gene Symbol: LARP6
Alias: FLJ11196|acheron
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 23099 bases
Position: chr10:83528959-83552057
Accession: 102175687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000011660	La	PF05383.17	1.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000019450	LARP6-201	2267	XM_018053565	ENSCHIP00000011660	492 (aa)	XP_017909054	UPI0006B1262B

Gene Model

Click here to download ENSCHIG00000013742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000013742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000013742	LARP6	100	92.480	ENSG00000166173	LARP6	100	100.000	Homo_sapiens
ENSCHIG00000013742	LARP6	95	58.058	ENSAPOG00000021773	larp6a	63	60.000	Acanthochromis_polyacanthus
ENSCHIG00000013742	LARP6	87	90.421	ENSAMEG00000008897	LARP6	100	90.421	Ailuropoda_melanoleuca
ENSCHIG00000013742	LARP6	95	58.678	ENSACIG00000005166	larp6a	86	60.000	Amphilophus_citrinellus
ENSCHIG00000013742	LARP6	95	58.058	ENSAOCG00000002284	larp6a	63	60.000	Amphiprion_ocellaris
ENSCHIG00000013742	LARP6	95	58.058	ENSAPEG00000008077	larp6a	84	60.000	Amphiprion_percula
ENSCHIG00000013742	LARP6	95	58.058	ENSATEG00000004018	larp6a	62	59.775	Anabas_testudineus
ENSCHIG00000013742	LARP6	85	70.449	ENSAPLG00000009914	LARP6	99	70.449	Anas_platyrhynchos
ENSCHIG00000013742	LARP6	84	67.308	ENSACAG00000008613	LARP6	98	67.308	Anolis_carolinensis
ENSCHIG00000013742	LARP6	100	92.683	ENSANAG00000024860	LARP6	100	92.683	Aotus_nancymaae
ENSCHIG00000013742	LARP6	95	58.471	ENSACLG00000018561	larp6a	61	59.775	Astatotilapia_calliptera
ENSCHIG00000013742	LARP6	97	56.112	ENSAMXG00000029387	larp6a	68	58.425	Astyanax_mexicanus
ENSCHIG00000013742	LARP6	83	42.512	ENSAMXG00000036816	-	93	41.446	Astyanax_mexicanus
ENSCHIG00000013742	LARP6	100	98.374	ENSBTAG00000003915	LARP6	100	98.374	Bos_taurus
ENSCHIG00000013742	LARP6	100	91.870	ENSCJAG00000046236	-	100	91.870	Callithrix_jacchus
ENSCHIG00000013742	LARP6	100	92.480	ENSCJAG00000018642	-	100	92.480	Callithrix_jacchus
ENSCHIG00000013742	LARP6	86	92.000	ENSCAFG00000017616	LARP6	99	92.000	Canis_familiaris
ENSCHIG00000013742	LARP6	100	90.041	ENSCAFG00020007296	LARP6	100	91.057	Canis_lupus_dingo
ENSCHIG00000013742	LARP6	86	90.353	ENSTSYG00000028124	LARP6	87	90.353	Carlito_syrichta
ENSCHIG00000013742	LARP6	86	89.151	ENSCAPG00000015452	LARP6	99	89.151	Cavia_aperea
ENSCHIG00000013742	LARP6	100	87.830	ENSCPOG00000022687	LARP6	100	87.830	Cavia_porcellus
ENSCHIG00000013742	LARP6	100	91.870	ENSCCAG00000036320	LARP6	100	91.870	Cebus_capucinus
ENSCHIG00000013742	LARP6	100	92.683	ENSCATG00000042432	LARP6	100	92.683	Cercocebus_atys
ENSCHIG00000013742	LARP6	100	90.467	ENSCLAG00000007893	LARP6	100	90.467	Chinchilla_lanigera
ENSCHIG00000013742	LARP6	100	92.480	ENSCSAG00000013672	LARP6	100	92.480	Chlorocebus_sabaeus
ENSCHIG00000013742	LARP6	97	91.423	ENSCHOG00000003318	LARP6	100	91.423	Choloepus_hoffmanni
ENSCHIG00000013742	LARP6	89	69.336	ENSCPBG00000010771	LARP6	84	69.336	Chrysemys_picta_bellii
ENSCHIG00000013742	LARP6	86	92.941	ENSCANG00000025833	LARP6	100	92.941	Colobus_angolensis_palliatus
ENSCHIG00000013742	LARP6	100	89.431	ENSCGRG00001024472	Larp6	100	89.431	Cricetulus_griseus_chok1gshd
ENSCHIG00000013742	LARP6	100	89.431	ENSCGRG00000004527	Larp6	100	89.431	Cricetulus_griseus_crigri
ENSCHIG00000013742	LARP6	95	57.971	ENSCSEG00000011196	larp6a	65	59.910	Cynoglossus_semilaevis
ENSCHIG00000013742	LARP6	87	59.865	ENSCVAG00000009605	larp6a	65	59.865	Cyprinodon_variegatus
ENSCHIG00000013742	LARP6	87	58.259	ENSDARG00000005355	larp6a	97	61.033	Danio_rerio
ENSCHIG00000013742	LARP6	100	91.057	ENSDNOG00000042993	LARP6	100	90.447	Dasypus_novemcinctus
ENSCHIG00000013742	LARP6	100	80.972	ENSDORG00000023910	Larp6	100	80.162	Dipodomys_ordii
ENSCHIG00000013742	LARP6	79	89.313	ENSETEG00000020390	LARP6	78	89.313	Echinops_telfairi
ENSCHIG00000013742	LARP6	100	94.715	ENSEASG00005005490	LARP6	73	94.715	Equus_asinus_asinus
ENSCHIG00000013742	LARP6	100	94.512	ENSECAG00000014190	LARP6	100	94.512	Equus_caballus
ENSCHIG00000013742	LARP6	87	58.837	ENSELUG00000007341	larp6a	64	58.837	Esox_lucius
ENSCHIG00000013742	LARP6	100	92.073	ENSFCAG00000001361	LARP6	100	92.073	Felis_catus
ENSCHIG00000013742	LARP6	88	67.955	ENSFALG00000012389	LARP6	99	64.792	Ficedula_albicollis
ENSCHIG00000013742	LARP6	100	82.114	ENSFDAG00000019994	LARP6	86	90.227	Fukomys_damarensis
ENSCHIG00000013742	LARP6	87	59.865	ENSFHEG00000010312	larp6a	63	59.641	Fundulus_heteroclitus
ENSCHIG00000013742	LARP6	98	65.164	ENSGALG00000004046	LARP6	96	65.164	Gallus_gallus
ENSCHIG00000013742	LARP6	87	60.090	ENSGAFG00000009426	larp6a	65	60.090	Gambusia_affinis
ENSCHIG00000013742	LARP6	86	59.954	ENSGACG00000014622	larp6a	97	59.954	Gasterosteus_aculeatus
ENSCHIG00000013742	LARP6	81	69.424	ENSGAGG00000010802	LARP6	59	69.424	Gopherus_agassizii
ENSCHIG00000013742	LARP6	86	93.176	ENSGGOG00000024151	LARP6	100	93.176	Gorilla_gorilla
ENSCHIG00000013742	LARP6	95	58.471	ENSHBUG00000021014	larp6a	61	59.775	Haplochromis_burtoni
ENSCHIG00000013742	LARP6	100	89.495	ENSHGLG00000015112	LARP6	100	89.495	Heterocephalus_glaber_female
ENSCHIG00000013742	LARP6	86	91.765	ENSHGLG00100013159	LARP6	100	91.765	Heterocephalus_glaber_male
ENSCHIG00000013742	LARP6	95	56.967	ENSHCOG00000001241	larp6a	84	59.234	Hippocampus_comes
ENSCHIG00000013742	LARP6	92	37.609	ENSIPUG00000002828	-	98	36.854	Ictalurus_punctatus
ENSCHIG00000013742	LARP6	85	59.404	ENSIPUG00000010187	larp6	65	60.046	Ictalurus_punctatus
ENSCHIG00000013742	LARP6	94	92.625	ENSSTOG00000024279	LARP6	98	92.699	Ictidomys_tridecemlineatus
ENSCHIG00000013742	LARP6	100	86.585	ENSJJAG00000011013	Larp6	100	86.585	Jaculus_jaculus
ENSCHIG00000013742	LARP6	87	61.074	ENSKMAG00000001702	larp6a	60	61.074	Kryptolebias_marmoratus
ENSCHIG00000013742	LARP6	95	56.173	ENSLBEG00000000170	larp6a	84	57.942	Labrus_bergylta
ENSCHIG00000013742	LARP6	97	64.167	ENSLACG00000018706	LARP6	90	63.750	Latimeria_chalumnae
ENSCHIG00000013742	LARP6	85	40.835	ENSLACG00000002786	-	98	44.159	Latimeria_chalumnae
ENSCHIG00000013742	LARP6	96	59.794	ENSLOCG00000014592	larp6a	69	59.221	Lepisosteus_oculatus
ENSCHIG00000013742	LARP6	84	45.283	ENSLOCG00000008547	-	82	42.353	Lepisosteus_oculatus
ENSCHIG00000013742	LARP6	91	90.380	ENSLAFG00000016343	LARP6	100	90.380	Loxodonta_africana
ENSCHIG00000013742	LARP6	91	93.333	ENSMFAG00000035507	LARP6	100	93.333	Macaca_fascicularis
ENSCHIG00000013742	LARP6	100	90.041	ENSMMUG00000004429	LARP6	100	89.228	Macaca_mulatta
ENSCHIG00000013742	LARP6	100	92.480	ENSMNEG00000045335	LARP6	100	92.480	Macaca_nemestrina
ENSCHIG00000013742	LARP6	86	92.941	ENSMLEG00000038587	LARP6	100	92.941	Mandrillus_leucophaeus
ENSCHIG00000013742	LARP6	95	58.230	ENSMAMG00000005261	larp6a	62	59.955	Mastacembelus_armatus
ENSCHIG00000013742	LARP6	95	58.471	ENSMZEG00005005774	larp6a	61	59.775	Maylandia_zebra
ENSCHIG00000013742	LARP6	85	69.668	ENSMGAG00000005077	LARP6	99	69.668	Meleagris_gallopavo
ENSCHIG00000013742	LARP6	100	89.228	ENSMAUG00000018486	Larp6	100	89.228	Mesocricetus_auratus
ENSCHIG00000013742	LARP6	100	89.431	ENSMICG00000011234	LARP6	100	89.431	Microcebus_murinus
ENSCHIG00000013742	LARP6	100	89.024	ENSMOCG00000010492	Larp6	100	89.024	Microtus_ochrogaster
ENSCHIG00000013742	LARP6	95	58.385	ENSMMOG00000016284	larp6a	85	60.360	Mola_mola
ENSCHIG00000013742	LARP6	97	74.792	ENSMODG00000009034	LARP6	93	74.792	Monodelphis_domestica
ENSCHIG00000013742	LARP6	95	58.436	ENSMALG00000014439	larp6a	84	60.179	Monopterus_albus
ENSCHIG00000013742	LARP6	100	89.634	MGP_CAROLIEiJ_G0032314	Larp6	100	89.634	Mus_caroli
ENSCHIG00000013742	LARP6	100	89.837	ENSMUSG00000034839	Larp6	100	89.837	Mus_musculus
ENSCHIG00000013742	LARP6	100	89.228	MGP_PahariEiJ_G0015180	Larp6	100	89.228	Mus_pahari
ENSCHIG00000013742	LARP6	100	89.634	MGP_SPRETEiJ_G0033452	Larp6	100	89.634	Mus_spretus
ENSCHIG00000013742	LARP6	87	90.421	ENSMPUG00000017086	LARP6	100	90.421	Mustela_putorius_furo
ENSCHIG00000013742	LARP6	100	91.463	ENSMLUG00000010319	LARP6	100	91.463	Myotis_lucifugus
ENSCHIG00000013742	LARP6	100	90.244	ENSNGAG00000014238	Larp6	100	90.244	Nannospalax_galili
ENSCHIG00000013742	LARP6	95	58.471	ENSNBRG00000008120	larp6a	84	59.775	Neolamprologus_brichardi
ENSCHIG00000013742	LARP6	100	92.276	ENSNLEG00000013691	LARP6	100	91.057	Nomascus_leucogenys
ENSCHIG00000013742	LARP6	85	74.302	ENSMEUG00000002270	LARP6	98	64.815	Notamacropus_eugenii
ENSCHIG00000013742	LARP6	72	77.841	ENSOPRG00000004868	-	100	77.841	Ochotona_princeps
ENSCHIG00000013742	LARP6	100	85.801	ENSODEG00000015958	LARP6	100	85.801	Octodon_degus
ENSCHIG00000013742	LARP6	95	58.436	ENSONIG00000002901	larp6a	84	59.732	Oreochromis_niloticus
ENSCHIG00000013742	LARP6	86	82.311	ENSOCUG00000009306	LARP6	99	82.311	Oryctolagus_cuniculus
ENSCHIG00000013742	LARP6	95	58.264	ENSORLG00000014256	larp6a	86	60.586	Oryzias_latipes
ENSCHIG00000013742	LARP6	95	58.264	ENSORLG00020019657	larp6a	63	60.586	Oryzias_latipes_hni
ENSCHIG00000013742	LARP6	95	58.264	ENSORLG00015017915	larp6a	63	60.586	Oryzias_latipes_hsok
ENSCHIG00000013742	LARP6	95	58.264	ENSOMEG00000017049	larp6a	63	60.586	Oryzias_melastigma
ENSCHIG00000013742	LARP6	100	90.447	ENSOGAG00000000522	LARP6	100	90.447	Otolemur_garnettii
ENSCHIG00000013742	LARP6	87	98.832	ENSOARG00000018750	LARP6	99	98.832	Ovis_aries
ENSCHIG00000013742	LARP6	86	93.176	ENSPPAG00000031247	LARP6	100	93.176	Pan_paniscus
ENSCHIG00000013742	LARP6	100	91.463	ENSPPRG00000011282	LARP6	100	91.463	Panthera_pardus
ENSCHIG00000013742	LARP6	86	91.294	ENSPTIG00000015318	LARP6	86	91.294	Panthera_tigris_altaica
ENSCHIG00000013742	LARP6	100	92.480	ENSPTRG00000007234	LARP6	100	92.480	Pan_troglodytes
ENSCHIG00000013742	LARP6	100	92.480	ENSPANG00000016362	LARP6	100	92.480	Papio_anubis
ENSCHIG00000013742	LARP6	96	58.299	ENSPKIG00000020103	larp6a	84	59.732	Paramormyrops_kingsleyae
ENSCHIG00000013742	LARP6	95	57.026	ENSPKIG00000004511	LARP6	67	57.826	Paramormyrops_kingsleyae
ENSCHIG00000013742	LARP6	62	81.731	ENSPSIG00000009071	LARP6	91	75.652	Pelodiscus_sinensis
ENSCHIG00000013742	LARP6	95	58.471	ENSPMGG00000006958	larp6a	86	60.449	Periophthalmus_magnuspinnatus
ENSCHIG00000013742	LARP6	100	89.024	ENSPEMG00000012909	Larp6	100	89.024	Peromyscus_maniculatus_bairdii
ENSCHIG00000013742	LARP6	97	75.208	ENSPCIG00000020765	LARP6	93	75.208	Phascolarctos_cinereus
ENSCHIG00000013742	LARP6	87	59.598	ENSPFOG00000014175	larp6a	84	59.598	Poecilia_formosa
ENSCHIG00000013742	LARP6	87	59.641	ENSPLAG00000011105	larp6a	62	59.641	Poecilia_latipinna
ENSCHIG00000013742	LARP6	87	59.865	ENSPMEG00000011085	larp6a	63	59.865	Poecilia_mexicana
ENSCHIG00000013742	LARP6	87	60.090	ENSPREG00000008067	larp6a	63	60.090	Poecilia_reticulata
ENSCHIG00000013742	LARP6	100	92.480	ENSPPYG00000006604	LARP6	100	92.480	Pongo_abelii
ENSCHIG00000013742	LARP6	65	92.169	ENSPCAG00000014197	LARP6	76	92.169	Procavia_capensis
ENSCHIG00000013742	LARP6	100	90.244	ENSPCOG00000022934	LARP6	100	90.244	Propithecus_coquereli
ENSCHIG00000013742	LARP6	100	92.276	ENSPVAG00000005618	LARP6	100	92.276	Pteropus_vampyrus
ENSCHIG00000013742	LARP6	95	58.471	ENSPNYG00000009835	larp6a	84	59.775	Pundamilia_nyererei
ENSCHIG00000013742	LARP6	87	58.166	ENSPNAG00000017966	larp6a	72	59.060	Pygocentrus_nattereri
ENSCHIG00000013742	LARP6	100	88.211	ENSRNOG00000012438	Larp6	100	88.211	Rattus_norvegicus
ENSCHIG00000013742	LARP6	98	90.103	ENSRBIG00000032902	LARP6	98	90.103	Rhinopithecus_bieti
ENSCHIG00000013742	LARP6	98	92.961	ENSRROG00000043074	LARP6	98	92.961	Rhinopithecus_roxellana
ENSCHIG00000013742	LARP6	86	92.941	ENSSBOG00000024190	LARP6	100	92.941	Saimiri_boliviensis_boliviensis
ENSCHIG00000013742	LARP6	87	75.234	ENSSHAG00000018495	LARP6	100	75.234	Sarcophilus_harrisii
ENSCHIG00000013742	LARP6	95	52.632	ENSSFOG00015002254	LARP6	91	52.201	Scleropages_formosus
ENSCHIG00000013742	LARP6	85	61.502	ENSSFOG00015023268	larp6a	82	62.441	Scleropages_formosus
ENSCHIG00000013742	LARP6	95	57.971	ENSSMAG00000009953	larp6a	62	59.009	Scophthalmus_maximus
ENSCHIG00000013742	LARP6	95	58.557	ENSSDUG00000007438	larp6a	62	60.314	Seriola_dumerili
ENSCHIG00000013742	LARP6	95	58.557	ENSSLDG00000016647	larp6a	62	60.314	Seriola_lalandi_dorsalis
ENSCHIG00000013742	LARP6	86	70.616	ENSSPUG00000011312	LARP6	99	70.616	Sphenodon_punctatus
ENSCHIG00000013742	LARP6	95	58.058	ENSSPAG00000020502	larp6a	62	60.000	Stegastes_partitus
ENSCHIG00000013742	LARP6	100	94.309	ENSSSCG00000004974	LARP6	100	94.309	Sus_scrofa
ENSCHIG00000013742	LARP6	85	68.720	ENSTGUG00000005808	LARP6	99	68.720	Taeniopygia_guttata
ENSCHIG00000013742	LARP6	95	57.613	ENSTRUG00000003151	larp6a	65	58.929	Takifugu_rubripes
ENSCHIG00000013742	LARP6	95	57.143	ENSTNIG00000011926	larp6a	88	58.371	Tetraodon_nigroviridis
ENSCHIG00000013742	LARP6	86	89.412	ENSTBEG00000015077	LARP6	100	89.412	Tupaia_belangeri
ENSCHIG00000013742	LARP6	93	85.153	ENSUAMG00000010467	LARP6	89	86.062	Ursus_americanus
ENSCHIG00000013742	LARP6	92	88.248	ENSVVUG00000015227	LARP6	99	88.248	Vulpes_vulpes
ENSCHIG00000013742	LARP6	96	65.966	ENSXETG00000020340	larp6	88	68.879	Xenopus_tropicalis
ENSCHIG00000013742	LARP6	87	60.314	ENSXCOG00000012654	larp6a	89	60.314	Xiphophorus_couchianus
ENSCHIG00000013742	LARP6	87	60.314	ENSXMAG00000021015	larp6a	60	60.314	Xiphophorus_maculatus