EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000013871 (Gene tree)
Gene ID: 102190836
Gene Symbol: CHD1L
Alias: ALC1
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 72263 bases
Position: chr3:98080509-98152771
Accession: 102190836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000011925	ResIII	PF04851.15	9.1e-11	1	1
ENSCHIP00000011908	ResIII	PF04851.15	9.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000019715	CHD1L-202	2661	-	ENSCHIP00000011925	886 (aa)	-	UPI000D193005
ENSCHIT00000019698	CHD1L-201	2743	XM_018046000	ENSCHIP00000011908	893 (aa)	XP_017901489	UPI000846D230

Gene Model

Click here to download ENSCHIG00000013871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000013871's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000013871	CHD1L	62	43.058	ENSCHIG00000009837	SMARCA1	58	40.640
ENSCHIG00000013871	CHD1L	52	30.291	ENSCHIG00000020118	RAD54L	68	30.291
ENSCHIG00000013871	CHD1L	62	41.187	ENSCHIG00000016375	-	54	41.463
ENSCHIG00000013871	CHD1L	51	31.518	ENSCHIG00000008230	-	55	31.518
ENSCHIG00000013871	CHD1L	62	42.261	ENSCHIG00000013730	-	54	42.367
ENSCHIG00000013871	CHD1L	52	38.674	ENSCHIG00000019462	HELLS	67	38.674

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000013871	CHD1L	99	90.858	ENSG00000131778	CHD1L	99	90.716	Homo_sapiens
ENSCHIG00000013871	CHD1L	96	65.353	ENSAPOG00000001539	chd1l	99	65.701	Acanthochromis_polyacanthus
ENSCHIG00000013871	CHD1L	99	89.474	ENSAMEG00000017063	CHD1L	99	89.474	Ailuropoda_melanoleuca
ENSCHIG00000013871	CHD1L	94	65.995	ENSACIG00000001164	chd1l	99	64.760	Amphilophus_citrinellus
ENSCHIG00000013871	CHD1L	96	65.425	ENSAOCG00000014510	chd1l	86	65.103	Amphiprion_ocellaris
ENSCHIG00000013871	CHD1L	95	63.072	ENSAPEG00000017450	chd1l	94	63.306	Amphiprion_percula
ENSCHIG00000013871	CHD1L	97	62.558	ENSAPEG00000017573	chd1l	95	63.061	Amphiprion_percula
ENSCHIG00000013871	CHD1L	99	65.227	ENSATEG00000013058	chd1l	94	65.227	Anabas_testudineus
ENSCHIG00000013871	CHD1L	98	72.789	ENSAPLG00000009976	CHD1L	99	72.595	Anas_platyrhynchos
ENSCHIG00000013871	CHD1L	97	67.637	ENSACAG00000017686	CHD1L	99	67.072	Anolis_carolinensis
ENSCHIG00000013871	CHD1L	99	89.605	ENSANAG00000024347	CHD1L	99	89.474	Aotus_nancymaae
ENSCHIG00000013871	CHD1L	98	64.229	ENSACLG00000019304	chd1l	98	64.626	Astatotilapia_calliptera
ENSCHIG00000013871	CHD1L	99	58.797	ENSAMXG00000012367	chd1l	88	58.797	Astyanax_mexicanus
ENSCHIG00000013871	CHD1L	100	98.320	ENSBTAG00000020831	CHD1L	99	98.320	Bos_taurus
ENSCHIG00000013871	CHD1L	99	89.921	ENSCJAG00000002406	CHD1L	99	89.675	Callithrix_jacchus
ENSCHIG00000013871	CHD1L	99	86.704	ENSCAFG00000010944	CHD1L	99	86.704	Canis_familiaris
ENSCHIG00000013871	CHD1L	99	88.876	ENSCAFG00020020121	CHD1L	99	88.876	Canis_lupus_dingo
ENSCHIG00000013871	CHD1L	94	92.381	ENSTSYG00000003005	CHD1L	99	92.099	Carlito_syrichta
ENSCHIG00000013871	CHD1L	98	86.667	ENSCPOG00000009000	CHD1L	99	86.450	Cavia_porcellus
ENSCHIG00000013871	CHD1L	99	86.863	ENSCCAG00000036079	CHD1L	99	86.644	Cebus_capucinus
ENSCHIG00000013871	CHD1L	98	91.043	ENSCATG00000031044	CHD1L	99	90.615	Cercocebus_atys
ENSCHIG00000013871	CHD1L	98	88.282	ENSCLAG00000000880	CHD1L	99	88.189	Chinchilla_lanigera
ENSCHIG00000013871	CHD1L	98	91.043	ENSCSAG00000018386	CHD1L	99	90.503	Chlorocebus_sabaeus
ENSCHIG00000013871	CHD1L	97	75.688	ENSCPBG00000002600	CHD1L	99	74.774	Chrysemys_picta_bellii
ENSCHIG00000013871	CHD1L	99	89.064	ENSCANG00000020239	CHD1L	99	88.939	Colobus_angolensis_palliatus
ENSCHIG00000013871	CHD1L	97	85.862	ENSCGRG00001021624	Chd1l	99	84.797	Cricetulus_griseus_chok1gshd
ENSCHIG00000013871	CHD1L	93	86.386	ENSCGRG00000007554	Chd1l	99	85.259	Cricetulus_griseus_crigri
ENSCHIG00000013871	CHD1L	97	61.353	ENSCVAG00000002595	chd1l	91	61.785	Cyprinodon_variegatus
ENSCHIG00000013871	CHD1L	97	65.212	ENSDARG00000015471	chd1l	86	64.560	Danio_rerio
ENSCHIG00000013871	CHD1L	99	89.597	ENSDNOG00000019504	CHD1L	99	89.821	Dasypus_novemcinctus
ENSCHIG00000013871	CHD1L	99	82.682	ENSDORG00000013555	Chd1l	99	82.905	Dipodomys_ordii
ENSCHIG00000013871	CHD1L	89	81.317	ENSETEG00000008445	CHD1L	90	77.358	Echinops_telfairi
ENSCHIG00000013871	CHD1L	64	78.723	ENSEBUG00000005791	chd1l	75	78.723	Eptatretus_burgeri
ENSCHIG00000013871	CHD1L	99	90.492	ENSEASG00005007364	CHD1L	100	91.463	Equus_asinus_asinus
ENSCHIG00000013871	CHD1L	99	90.380	ENSECAG00000008915	CHD1L	100	91.463	Equus_caballus
ENSCHIG00000013871	CHD1L	96	56.286	ENSELUG00000016844	chd1l	85	55.215	Esox_lucius
ENSCHIG00000013871	CHD1L	99	89.527	ENSFCAG00000007777	CHD1L	99	89.385	Felis_catus
ENSCHIG00000013871	CHD1L	99	71.111	ENSFALG00000006087	CHD1L	99	71.667	Ficedula_albicollis
ENSCHIG00000013871	CHD1L	94	90.250	ENSFDAG00000012431	CHD1L	99	89.801	Fukomys_damarensis
ENSCHIG00000013871	CHD1L	96	63.668	ENSFHEG00000012420	chd1l	87	62.874	Fundulus_heteroclitus
ENSCHIG00000013871	CHD1L	96	72.685	ENSGALG00000015038	CHD1L	98	71.833	Gallus_gallus
ENSCHIG00000013871	CHD1L	96	64.064	ENSGAFG00000018198	chd1l	97	61.737	Gambusia_affinis
ENSCHIG00000013871	CHD1L	58	65.377	ENSGACG00000014042	chd1l	98	65.887	Gasterosteus_aculeatus
ENSCHIG00000013871	CHD1L	96	75.491	ENSGAGG00000014432	CHD1L	99	75.058	Gopherus_agassizii
ENSCHIG00000013871	CHD1L	99	90.417	ENSGGOG00000001067	CHD1L	99	90.279	Gorilla_gorilla
ENSCHIG00000013871	CHD1L	97	64.840	ENSHBUG00000007464	chd1l	98	64.679	Haplochromis_burtoni
ENSCHIG00000013871	CHD1L	98	87.343	ENSHGLG00000008933	CHD1L	99	86.839	Heterocephalus_glaber_female
ENSCHIG00000013871	CHD1L	94	85.511	ENSHGLG00100007155	CHD1L	99	85.363	Heterocephalus_glaber_male
ENSCHIG00000013871	CHD1L	96	63.115	ENSHCOG00000012787	chd1l	94	63.115	Hippocampus_comes
ENSCHIG00000013871	CHD1L	97	60.068	ENSIPUG00000022617	chd1l	86	60.274	Ictalurus_punctatus
ENSCHIG00000013871	CHD1L	99	79.709	ENSSTOG00000007032	CHD1L	99	79.821	Ictidomys_tridecemlineatus
ENSCHIG00000013871	CHD1L	98	63.503	ENSKMAG00000014358	chd1l	87	63.729	Kryptolebias_marmoratus
ENSCHIG00000013871	CHD1L	97	63.188	ENSLBEG00000023845	chd1l	96	63.758	Labrus_bergylta
ENSCHIG00000013871	CHD1L	95	65.578	ENSLACG00000006262	CHD1L	86	65.376	Latimeria_chalumnae
ENSCHIG00000013871	CHD1L	97	70.208	ENSLOCG00000010574	chd1l	88	68.856	Lepisosteus_oculatus
ENSCHIG00000013871	CHD1L	96	89.290	ENSLAFG00000018136	CHD1L	100	89.290	Loxodonta_africana
ENSCHIG00000013871	CHD1L	97	88.708	ENSMFAG00000043562	CHD1L	99	91.352	Macaca_fascicularis
ENSCHIG00000013871	CHD1L	98	90.703	ENSMMUG00000009024	CHD1L	99	90.279	Macaca_mulatta
ENSCHIG00000013871	CHD1L	98	90.816	ENSMNEG00000039905	CHD1L	99	90.391	Macaca_nemestrina
ENSCHIG00000013871	CHD1L	98	91.043	ENSMLEG00000030900	CHD1L	99	90.615	Mandrillus_leucophaeus
ENSCHIG00000013871	CHD1L	97	62.671	ENSMAMG00000012822	chd1l	99	61.175	Mastacembelus_armatus
ENSCHIG00000013871	CHD1L	97	64.960	ENSMZEG00005020830	chd1l	88	64.960	Maylandia_zebra
ENSCHIG00000013871	CHD1L	96	71.981	ENSMGAG00000014304	CHD1L	99	72.248	Meleagris_gallopavo
ENSCHIG00000013871	CHD1L	99	90.068	ENSMICG00000002497	CHD1L	99	89.721	Microcebus_murinus
ENSCHIG00000013871	CHD1L	99	85.363	ENSMOCG00000006305	Chd1l	99	84.804	Microtus_ochrogaster
ENSCHIG00000013871	CHD1L	95	62.309	ENSMMOG00000005964	chd1l	90	62.413	Mola_mola
ENSCHIG00000013871	CHD1L	99	79.438	ENSMODG00000018717	CHD1L	99	79.663	Monodelphis_domestica
ENSCHIG00000013871	CHD1L	97	64.302	ENSMALG00000014675	chd1l	86	64.612	Monopterus_albus
ENSCHIG00000013871	CHD1L	99	85.827	MGP_CAROLIEiJ_G0025401	Chd1l	99	85.714	Mus_caroli
ENSCHIG00000013871	CHD1L	97	86.152	ENSMUSG00000028089	Chd1l	99	85.011	Mus_musculus
ENSCHIG00000013871	CHD1L	99	85.795	MGP_PahariEiJ_G0026845	Chd1l	99	85.344	Mus_pahari
ENSCHIG00000013871	CHD1L	97	86.827	MGP_SPRETEiJ_G0026347	Chd1l	99	85.892	Mus_spretus
ENSCHIG00000013871	CHD1L	99	88.578	ENSMPUG00000000615	CHD1L	99	88.578	Mustela_putorius_furo
ENSCHIG00000013871	CHD1L	99	86.489	ENSMLUG00000007573	CHD1L	99	86.600	Myotis_lucifugus
ENSCHIG00000013871	CHD1L	96	83.721	ENSNGAG00000000908	Chd1l	99	82.989	Nannospalax_galili
ENSCHIG00000013871	CHD1L	95	63.573	ENSNBRG00000006021	chd1l	93	63.573	Neolamprologus_brichardi
ENSCHIG00000013871	CHD1L	99	90.304	ENSNLEG00000000179	CHD1L	99	90.168	Nomascus_leucogenys
ENSCHIG00000013871	CHD1L	95	76.706	ENSOPRG00000006973	CHD1L	99	77.176	Ochotona_princeps
ENSCHIG00000013871	CHD1L	98	83.653	ENSODEG00000002494	CHD1L	99	83.799	Octodon_degus
ENSCHIG00000013871	CHD1L	98	64.659	ENSONIG00000003183	chd1l	89	65.188	Oreochromis_niloticus
ENSCHIG00000013871	CHD1L	86	73.705	ENSOANG00000003068	CHD1L	93	74.223	Ornithorhynchus_anatinus
ENSCHIG00000013871	CHD1L	99	83.853	ENSOCUG00000009336	CHD1L	99	83.444	Oryctolagus_cuniculus
ENSCHIG00000013871	CHD1L	94	63.909	ENSORLG00000003673	chd1l	93	63.121	Oryzias_latipes
ENSCHIG00000013871	CHD1L	97	62.989	ENSORLG00020005123	chd1l	98	62.571	Oryzias_latipes_hni
ENSCHIG00000013871	CHD1L	99	62.333	ENSORLG00015001680	chd1l	98	62.053	Oryzias_latipes_hsok
ENSCHIG00000013871	CHD1L	74	64.754	ENSOMEG00000006109	chd1l	81	64.754	Oryzias_melastigma
ENSCHIG00000013871	CHD1L	99	88.393	ENSOGAG00000008775	CHD1L	99	88.393	Otolemur_garnettii
ENSCHIG00000013871	CHD1L	99	99.215	ENSOARG00000020547	CHD1L	99	99.647	Ovis_aries
ENSCHIG00000013871	CHD1L	98	89.931	ENSPPAG00000039193	CHD1L	99	91.941	Pan_paniscus
ENSCHIG00000013871	CHD1L	99	89.752	ENSPPRG00000010258	CHD1L	99	89.609	Panthera_pardus
ENSCHIG00000013871	CHD1L	99	90.858	ENSPTRG00000001220	CHD1L	99	90.705	Pan_troglodytes
ENSCHIG00000013871	CHD1L	98	90.816	ENSPANG00000009170	CHD1L	99	90.391	Papio_anubis
ENSCHIG00000013871	CHD1L	97	63.761	ENSPKIG00000022166	chd1l	97	61.298	Paramormyrops_kingsleyae
ENSCHIG00000013871	CHD1L	97	75.803	ENSPSIG00000012595	CHD1L	97	75.400	Pelodiscus_sinensis
ENSCHIG00000013871	CHD1L	98	83.596	ENSPEMG00000013528	Chd1l	99	83.278	Peromyscus_maniculatus_bairdii
ENSCHIG00000013871	CHD1L	92	81.851	ENSPCIG00000030409	CHD1L	99	81.851	Phascolarctos_cinereus
ENSCHIG00000013871	CHD1L	97	63.158	ENSPFOG00000015948	chd1l	86	63.272	Poecilia_formosa
ENSCHIG00000013871	CHD1L	97	63.068	ENSPLAG00000015145	chd1l	98	62.457	Poecilia_latipinna
ENSCHIG00000013871	CHD1L	97	62.971	ENSPMEG00000008720	chd1l	91	63.056	Poecilia_mexicana
ENSCHIG00000013871	CHD1L	95	62.500	ENSPREG00000017885	chd1l	97	61.921	Poecilia_reticulata
ENSCHIG00000013871	CHD1L	99	91.432	ENSPPYG00000000946	CHD1L	99	91.285	Pongo_abelii
ENSCHIG00000013871	CHD1L	99	77.095	ENSPCAG00000005959	CHD1L	99	77.095	Procavia_capensis
ENSCHIG00000013871	CHD1L	95	81.732	ENSPVAG00000006084	CHD1L	100	81.732	Pteropus_vampyrus
ENSCHIG00000013871	CHD1L	96	64.679	ENSPNYG00000013001	chd1l	96	65.238	Pundamilia_nyererei
ENSCHIG00000013871	CHD1L	95	65.035	ENSPNAG00000011881	chd1l	86	64.181	Pygocentrus_nattereri
ENSCHIG00000013871	CHD1L	99	84.950	ENSRNOG00000017669	Chd1l	99	85.061	Rattus_norvegicus
ENSCHIG00000013871	CHD1L	99	88.952	ENSRBIG00000041272	CHD1L	99	88.827	Rhinopithecus_bieti
ENSCHIG00000013871	CHD1L	98	89.041	ENSRROG00000041354	CHD1L	99	88.952	Rhinopithecus_roxellana
ENSCHIG00000013871	CHD1L	98	77.055	ENSSHAG00000017395	CHD1L	99	76.742	Sarcophilus_harrisii
ENSCHIG00000013871	CHD1L	96	66.279	ENSSFOG00015003649	chd1l	96	64.906	Scleropages_formosus
ENSCHIG00000013871	CHD1L	99	61.283	ENSSMAG00000019377	chd1l	97	61.155	Scophthalmus_maximus
ENSCHIG00000013871	CHD1L	95	65.012	ENSSDUG00000019831	chd1l	95	65.398	Seriola_dumerili
ENSCHIG00000013871	CHD1L	95	65.207	ENSSLDG00000012714	chd1l	95	64.830	Seriola_lalandi_dorsalis
ENSCHIG00000013871	CHD1L	97	72.426	ENSSPUG00000016865	CHD1L	98	72.769	Sphenodon_punctatus
ENSCHIG00000013871	CHD1L	97	65.553	ENSSPAG00000017653	chd1l	93	65.158	Stegastes_partitus
ENSCHIG00000013871	CHD1L	98	87.130	ENSSSCG00000006701	CHD1L	98	89.906	Sus_scrofa
ENSCHIG00000013871	CHD1L	95	73.740	ENSTGUG00000013392	-	99	73.441	Taeniopygia_guttata
ENSCHIG00000013871	CHD1L	94	60.167	ENSTNIG00000004902	chd1l	99	58.775	Tetraodon_nigroviridis
ENSCHIG00000013871	CHD1L	96	88.132	ENSTTRG00000011711	CHD1L	99	88.132	Tursiops_truncatus
ENSCHIG00000013871	CHD1L	99	88.989	ENSUAMG00000021991	CHD1L	99	89.213	Ursus_americanus
ENSCHIG00000013871	CHD1L	99	88.876	ENSUMAG00000009733	CHD1L	99	88.876	Ursus_maritimus
ENSCHIG00000013871	CHD1L	99	88.802	ENSVVUG00000007316	CHD1L	95	88.802	Vulpes_vulpes
ENSCHIG00000013871	CHD1L	97	61.187	ENSXCOG00000008336	chd1l	86	60.959	Xiphophorus_couchianus
ENSCHIG00000013871	CHD1L	97	64.041	ENSXMAG00000015898	chd1l	96	60.880	Xiphophorus_maculatus