EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000013971 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 1749 bases
Position: chr12:38872880-38874628
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000012092	RRM_1	PF00076.22	3.1e-16	1	1
ENSCHIP00000012060	RRM_1	PF00076.22	3.2e-16	1	1
ENSCHIP00000012071	RRM_1	PF00076.22	3.5e-16	1	1
ENSCHIP00000012071	RRM_3	PF08777.11	2.2e-26	1	1
ENSCHIP00000012092	RRM_3	PF08777.11	4.8e-26	1	1
ENSCHIP00000012060	RRM_3	PF08777.11	5.3e-26	1	1
ENSCHIP00000012092	La	PF05383.17	2.2e-21	1	1
ENSCHIP00000012060	La	PF05383.17	2.3e-21	1	1
ENSCHIP00000012071	La	PF05383.17	2.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000019850	-	1524	-	ENSCHIP00000012060	507 (aa)	-	UPI000D193A64
ENSCHIT00000019882	-	1434	-	ENSCHIP00000012092	477 (aa)	-	UPI000D18C3FA
ENSCHIT00000019861	-	1518	-	ENSCHIP00000012071	505 (aa)	-	UPI000D190126

Gene Model

Click here to download ENSCHIG00000013971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000013971's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000013971	-	100	90.688	ENSCHIG00000014163	-	100	79.447

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000013971	-	97	82.101	ENSG00000174720	LARP7	100	86.047	Homo_sapiens
ENSCHIG00000013971	-	99	52.305	ENSAPOG00000014570	larp7	99	53.458	Acanthochromis_polyacanthus
ENSCHIG00000013971	-	97	82.490	ENSAMEG00000015642	LARP7	100	71.945	Ailuropoda_melanoleuca
ENSCHIG00000013971	-	98	52.571	ENSACIG00000023850	larp7	98	48.446	Amphilophus_citrinellus
ENSCHIG00000013971	-	95	52.542	ENSAOCG00000016160	larp7	99	49.738	Amphiprion_ocellaris
ENSCHIG00000013971	-	76	71.839	ENSAPEG00000021823	larp7	99	50.000	Amphiprion_percula
ENSCHIG00000013971	-	99	52.867	ENSATEG00000016238	larp7	97	52.509	Anabas_testudineus
ENSCHIG00000013971	-	94	71.863	ENSAPLG00000012887	LARP7	99	59.966	Anas_platyrhynchos
ENSCHIG00000013971	-	90	75.785	ENSACAG00000010662	LARP7	95	58.853	Anolis_carolinensis
ENSCHIG00000013971	-	100	61.331	ENSANAG00000022318	-	100	62.342	Aotus_nancymaae
ENSCHIG00000013971	-	97	81.712	ENSANAG00000031139	-	91	78.125	Aotus_nancymaae
ENSCHIG00000013971	-	79	67.857	ENSACLG00000023184	larp7	94	50.556	Astatotilapia_calliptera
ENSCHIG00000013971	-	94	47.495	ENSAMXG00000002549	larp7	94	50.376	Astyanax_mexicanus
ENSCHIG00000013971	-	95	89.796	ENSBTAG00000009632	LARP7	97	78.411	Bos_taurus
ENSCHIG00000013971	-	97	80.934	ENSCJAG00000003711	LARP7	100	71.306	Callithrix_jacchus
ENSCHIG00000013971	-	97	82.031	ENSCAFG00000011715	LARP7	100	71.870	Canis_familiaris
ENSCHIG00000013971	-	97	82.031	ENSCAFG00020017225	LARP7	100	72.069	Canis_lupus_dingo
ENSCHIG00000013971	-	89	84.426	ENSTSYG00000006769	-	100	73.297	Carlito_syrichta
ENSCHIG00000013971	-	94	71.318	ENSTSYG00000035188	-	97	68.022	Carlito_syrichta
ENSCHIG00000013971	-	96	63.011	ENSCAPG00000009328	LARP7	100	61.905	Cavia_aperea
ENSCHIG00000013971	-	96	71.165	ENSCPOG00000011830	LARP7	100	69.825	Cavia_porcellus
ENSCHIG00000013971	-	96	67.043	ENSCCAG00000023563	-	99	67.043	Cebus_capucinus
ENSCHIG00000013971	-	97	82.101	ENSCCAG00000026787	-	100	71.404	Cebus_capucinus
ENSCHIG00000013971	-	97	81.323	ENSCATG00000043535	LARP7	100	70.275	Cercocebus_atys
ENSCHIG00000013971	-	89	89.623	ENSCLAG00000005894	LARP7	100	69.406	Chinchilla_lanigera
ENSCHIG00000013971	-	96	82.540	ENSCSAG00000003810	LARP7	100	70.447	Chlorocebus_sabaeus
ENSCHIG00000013971	-	95	80.247	ENSCHOG00000002379	-	100	70.017	Choloepus_hoffmanni
ENSCHIG00000013971	-	86	78.899	ENSCHOG00000008967	-	87	78.899	Choloepus_hoffmanni
ENSCHIG00000013971	-	100	71.111	ENSCPBG00000004919	LARP7	89	74.206	Chrysemys_picta_bellii
ENSCHIG00000013971	-	95	82.800	ENSCANG00000031482	LARP7	99	70.497	Colobus_angolensis_palliatus
ENSCHIG00000013971	-	91	62.698	ENSCGRG00001012747	-	99	64.484	Cricetulus_griseus_chok1gshd
ENSCHIG00000013971	-	95	87.097	ENSCGRG00001025050	-	100	69.284	Cricetulus_griseus_chok1gshd
ENSCHIG00000013971	-	90	87.097	ENSCGRG00000001141	-	99	63.352	Cricetulus_griseus_crigri
ENSCHIG00000013971	-	87	79.724	ENSCGRG00000007642	-	99	65.672	Cricetulus_griseus_crigri
ENSCHIG00000013971	-	96	50.000	ENSCSEG00000009088	larp7	94	50.000	Cynoglossus_semilaevis
ENSCHIG00000013971	-	96	51.158	ENSCVAG00000016852	larp7	89	65.686	Cyprinodon_variegatus
ENSCHIG00000013971	-	96	51.796	ENSDARG00000017315	larp7	93	51.607	Danio_rerio
ENSCHIG00000013971	-	95	80.723	ENSDNOG00000013761	LARP7	100	70.205	Dasypus_novemcinctus
ENSCHIG00000013971	-	90	89.623	ENSDORG00000008896	-	98	69.190	Dipodomys_ordii
ENSCHIG00000013971	-	100	67.365	ENSETEG00000011692	LARP7	100	68.237	Echinops_telfairi
ENSCHIG00000013971	-	73	57.558	ENSEBUG00000013808	larp7	63	57.558	Eptatretus_burgeri
ENSCHIG00000013971	-	100	82.490	ENSEASG00005005592	LARP7	100	72.213	Equus_asinus_asinus
ENSCHIG00000013971	-	97	82.879	ENSECAG00000000834	LARP7	100	72.213	Equus_caballus
ENSCHIG00000013971	-	92	79.297	ENSEEUG00000012824	LARP7	99	70.741	Erinaceus_europaeus
ENSCHIG00000013971	-	76	72.414	ENSELUG00000015341	larp7	92	66.010	Esox_lucius
ENSCHIG00000013971	-	97	81.323	ENSFCAG00000031966	LARP7	100	71.945	Felis_catus
ENSCHIG00000013971	-	95	73.563	ENSFALG00000000972	LARP7	97	61.092	Ficedula_albicollis
ENSCHIG00000013971	-	90	87.678	ENSFDAG00000014048	-	100	69.123	Fukomys_damarensis
ENSCHIG00000013971	-	90	77.358	ENSFDAG00000011855	-	100	64.148	Fukomys_damarensis
ENSCHIG00000013971	-	76	72.571	ENSFHEG00000021652	larp7	94	51.220	Fundulus_heteroclitus
ENSCHIG00000013971	-	76	61.714	ENSGMOG00000010536	larp7	67	61.667	Gadus_morhua
ENSCHIG00000013971	-	99	60.406	ENSGALG00000012048	LARP7	99	60.406	Gallus_gallus
ENSCHIG00000013971	-	81	65.049	ENSGAFG00000015400	larp7	72	65.049	Gambusia_affinis
ENSCHIG00000013971	-	97	48.113	ENSGACG00000019618	larp7	90	62.621	Gasterosteus_aculeatus
ENSCHIG00000013971	-	95	75.745	ENSGAGG00000024520	LARP7	90	73.810	Gopherus_agassizii
ENSCHIG00000013971	-	83	88.947	ENSGGOG00000006438	-	77	90.761	Gorilla_gorilla
ENSCHIG00000013971	-	97	82.490	ENSGGOG00000023567	-	85	86.111	Gorilla_gorilla
ENSCHIG00000013971	-	79	68.367	ENSHBUG00000019223	larp7	98	51.642	Haplochromis_burtoni
ENSCHIG00000013971	-	90	88.679	ENSHGLG00000002716	LARP7	100	67.986	Heterocephalus_glaber_female
ENSCHIG00000013971	-	90	88.679	ENSHGLG00100000332	LARP7	100	67.986	Heterocephalus_glaber_male
ENSCHIG00000013971	-	99	51.119	ENSHCOG00000000664	LARP7	99	51.206	Hippocampus_comes
ENSCHIG00000013971	-	85	67.179	ENSIPUG00000019886	larp7	94	49.817	Ictalurus_punctatus
ENSCHIG00000013971	-	95	83.871	ENSSTOG00000011789	LARP7	100	71.601	Ictidomys_tridecemlineatus
ENSCHIG00000013971	-	90	91.549	ENSJJAG00000000257	-	100	69.603	Jaculus_jaculus
ENSCHIG00000013971	-	96	51.048	ENSKMAG00000005057	larp7	95	51.711	Kryptolebias_marmoratus
ENSCHIG00000013971	-	92	61.386	ENSLBEG00000020062	larp7	94	49.084	Labrus_bergylta
ENSCHIG00000013971	-	100	51.155	ENSLACG00000013744	LARP7	99	53.400	Latimeria_chalumnae
ENSCHIG00000013971	-	96	42.440	ENSLOCG00000011608	larp7	64	60.435	Lepisosteus_oculatus
ENSCHIG00000013971	-	97	80.156	ENSLAFG00000015769	LARP7	100	70.294	Loxodonta_africana
ENSCHIG00000013971	-	97	80.545	ENSMFAG00000036506	LARP7	100	70.103	Macaca_fascicularis
ENSCHIG00000013971	-	97	80.545	ENSMMUG00000017911	LARP7	100	70.103	Macaca_mulatta
ENSCHIG00000013971	-	97	80.934	ENSMNEG00000034758	LARP7	82	89.017	Macaca_nemestrina
ENSCHIG00000013971	-	97	81.323	ENSMLEG00000026154	LARP7	100	70.447	Mandrillus_leucophaeus
ENSCHIG00000013971	-	76	70.455	ENSMAMG00000005835	larp7	94	50.469	Mastacembelus_armatus
ENSCHIG00000013971	-	79	67.857	ENSMZEG00005002084	larp7	94	50.556	Maylandia_zebra
ENSCHIG00000013971	-	99	61.473	ENSMGAG00000010947	LARP7	99	61.644	Meleagris_gallopavo
ENSCHIG00000013971	-	90	86.256	ENSMAUG00000005625	-	80	81.405	Mesocricetus_auratus
ENSCHIG00000013971	-	95	84.211	ENSMICG00000031035	LARP7	100	72.069	Microcebus_murinus
ENSCHIG00000013971	-	91	86.574	ENSMOCG00000012519	-	100	69.391	Microtus_ochrogaster
ENSCHIG00000013971	-	88	83.598	ENSMOCG00000015761	-	100	68.639	Microtus_ochrogaster
ENSCHIG00000013971	-	95	73.438	ENSMODG00000005669	LARP7	100	64.237	Monodelphis_domestica
ENSCHIG00000013971	-	86	84.163	MGP_CAROLIEiJ_G0025613	-	100	68.412	Mus_caroli
ENSCHIG00000013971	-	86	84.163	ENSMUSG00000027968	Larp7	100	73.494	Mus_musculus
ENSCHIG00000013971	-	88	90.099	MGP_PahariEiJ_G0027060	-	100	68.467	Mus_pahari
ENSCHIG00000013971	-	92	85.068	MGP_SPRETEiJ_G0026566	Larp7	100	68.750	Mus_spretus
ENSCHIG00000013971	-	96	71.622	ENSMPUG00000018052	-	99	72.587	Mustela_putorius_furo
ENSCHIG00000013971	-	97	82.812	ENSMPUG00000008331	-	100	72.491	Mustela_putorius_furo
ENSCHIG00000013971	-	80	83.636	ENSMLUG00000027214	LARP7	81	83.636	Myotis_lucifugus
ENSCHIG00000013971	-	95	83.468	ENSNGAG00000007368	-	100	68.096	Nannospalax_galili
ENSCHIG00000013971	-	97	82.101	ENSNLEG00000016354	LARP7	84	86.111	Nomascus_leucogenys
ENSCHIG00000013971	-	88	66.801	ENSMEUG00000004739	LARP7	99	66.801	Notamacropus_eugenii
ENSCHIG00000013971	-	88	80.451	ENSOPRG00000009594	-	88	80.451	Ochotona_princeps
ENSCHIG00000013971	-	89	90.566	ENSODEG00000011121	LARP7	97	70.166	Octodon_degus
ENSCHIG00000013971	-	76	72.414	ENSONIG00000008763	larp7	94	50.741	Oreochromis_niloticus
ENSCHIG00000013971	-	99	63.131	ENSOANG00000009298	LARP7	99	63.805	Ornithorhynchus_anatinus
ENSCHIG00000013971	-	95	78.138	ENSOCUG00000007073	LARP7	100	68.621	Oryctolagus_cuniculus
ENSCHIG00000013971	-	96	52.140	ENSORLG00000004978	larp7	94	51.946	Oryzias_latipes
ENSCHIG00000013971	-	96	52.529	ENSORLG00020013825	larp7	94	52.335	Oryzias_latipes_hni
ENSCHIG00000013971	-	76	73.143	ENSOMEG00000006920	larp7	94	53.167	Oryzias_melastigma
ENSCHIG00000013971	-	95	83.065	ENSOGAG00000001643	LARP7	100	71.233	Otolemur_garnettii
ENSCHIG00000013971	-	100	90.688	ENSOARG00000001809	LARP7	100	79.381	Ovis_aries
ENSCHIG00000013971	-	97	82.490	ENSPPAG00000038420	LARP7	99	70.962	Pan_paniscus
ENSCHIG00000013971	-	97	81.323	ENSPPRG00000023256	LARP7	100	71.821	Panthera_pardus
ENSCHIG00000013971	-	92	81.323	ENSPTIG00000021146	LARP7	95	72.727	Panthera_tigris_altaica
ENSCHIG00000013971	-	97	82.490	ENSPTRG00000016380	LARP7	85	86.111	Pan_troglodytes
ENSCHIG00000013971	-	97	81.323	ENSPANG00000006701	LARP7	99	70.326	Papio_anubis
ENSCHIG00000013971	-	99	50.626	ENSPKIG00000023484	larp7	96	50.626	Paramormyrops_kingsleyae
ENSCHIG00000013971	-	97	78.537	ENSPSIG00000014419	LARP7	97	60.345	Pelodiscus_sinensis
ENSCHIG00000013971	-	95	71.004	ENSPEMG00000013978	-	100	66.837	Peromyscus_maniculatus_bairdii
ENSCHIG00000013971	-	96	35.390	ENSPMAG00000005362	larp7	94	34.759	Petromyzon_marinus
ENSCHIG00000013971	-	97	72.624	ENSPCIG00000020284	LARP7	98	73.504	Phascolarctos_cinereus
ENSCHIG00000013971	-	83	63.592	ENSPFOG00000000265	larp7	94	50.285	Poecilia_formosa
ENSCHIG00000013971	-	83	63.592	ENSPLAG00000012181	larp7	94	50.285	Poecilia_latipinna
ENSCHIG00000013971	-	83	63.592	ENSPMEG00000007182	larp7	94	50.285	Poecilia_mexicana
ENSCHIG00000013971	-	78	70.857	ENSPREG00000019513	larp7	94	50.755	Poecilia_reticulata
ENSCHIG00000013971	-	97	82.879	ENSPPYG00000015010	LARP7	85	86.508	Pongo_abelii
ENSCHIG00000013971	-	54	84.848	ENSPCAG00000003373	-	57	84.848	Procavia_capensis
ENSCHIG00000013971	-	79	84.444	ENSPCOG00000023946	LARP7	87	84.444	Propithecus_coquereli
ENSCHIG00000013971	-	95	83.265	ENSPVAG00000000282	LARP7	100	68.385	Pteropus_vampyrus
ENSCHIG00000013971	-	96	50.929	ENSPNAG00000017554	larp7	94	51.115	Pygocentrus_nattereri
ENSCHIG00000013971	-	88	90.099	ENSRNOG00000048989	Larp7	100	67.365	Rattus_norvegicus
ENSCHIG00000013971	-	76	80.934	ENSRBIG00000031916	LARP7	99	68.220	Rhinopithecus_bieti
ENSCHIG00000013971	-	97	80.934	ENSRROG00000033414	LARP7	100	70.619	Rhinopithecus_roxellana
ENSCHIG00000013971	-	90	62.218	ENSSBOG00000022652	-	100	57.678	Saimiri_boliviensis_boliviensis
ENSCHIG00000013971	-	100	73.737	ENSSBOG00000030886	-	100	70.719	Saimiri_boliviensis_boliviensis
ENSCHIG00000013971	-	88	81.604	ENSSHAG00000008153	LARP7	100	65.313	Sarcophilus_harrisii
ENSCHIG00000013971	-	99	51.418	ENSSFOG00015019344	larp7	97	51.087	Scleropages_formosus
ENSCHIG00000013971	-	96	52.150	ENSSMAG00000011296	larp7	98	51.356	Scophthalmus_maximus
ENSCHIG00000013971	-	99	51.865	ENSSDUG00000007045	larp7	98	51.873	Seriola_dumerili
ENSCHIG00000013971	-	99	52.482	ENSSPAG00000016066	larp7	99	51.327	Stegastes_partitus
ENSCHIG00000013971	-	95	82.927	ENSSSCG00000009119	LARP7	100	73.711	Sus_scrofa
ENSCHIG00000013971	-	86	79.717	ENSTGUG00000001804	LARP7	99	61.724	Taeniopygia_guttata
ENSCHIG00000013971	-	96	48.718	ENSTRUG00000004996	larp7	95	49.902	Takifugu_rubripes
ENSCHIG00000013971	-	96	44.106	ENSTNIG00000007183	larp7	99	44.547	Tetraodon_nigroviridis
ENSCHIG00000013971	-	93	84.810	ENSTBEG00000009188	LARP7	100	66.839	Tupaia_belangeri
ENSCHIG00000013971	-	85	91.623	ENSTTRG00000005233	LARP7	83	91.623	Tursiops_truncatus
ENSCHIG00000013971	-	95	84.677	ENSUAMG00000000836	LARP7	100	72.165	Ursus_americanus
ENSCHIG00000013971	-	94	84.677	ENSUMAG00000002263	LARP7	98	71.603	Ursus_maritimus
ENSCHIG00000013971	-	95	84.274	ENSVPAG00000010502	LARP7	100	73.540	Vicugna_pacos
ENSCHIG00000013971	-	97	82.031	ENSVVUG00000002274	LARP7	100	72.414	Vulpes_vulpes
ENSCHIG00000013971	-	85	72.727	ENSXETG00000024097	larp7	96	54.609	Xenopus_tropicalis
ENSCHIG00000013971	-	96	51.167	ENSXCOG00000004883	larp7	94	64.078	Xiphophorus_couchianus
ENSCHIG00000013971	-	81	64.078	ENSXMAG00000008479	larp7	94	49.338	Xiphophorus_maculatus