EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000013987 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 3061 bases
Position: chr18:15442652-15445712
Accession: 102190809
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000012074	RRM_1	PF00076.22	5.4e-14	1	1
ENSCHIP00000012063	RRM_1	PF00076.22	6.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000019864	PABPN1L-202	813	-	ENSCHIP00000012074	270 (aa)	-	UPI000D19119B
ENSCHIT00000019853	PABPN1L-201	924	XM_018063149	ENSCHIP00000012063	307 (aa)	XP_017918638	UPI000D19468E

Gene Model

Click here to download ENSCHIG00000013987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000013987's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000013987	PABPN1L	51	46.875	ENSCHIG00000012184	PABPN1	70	40.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000013987	PABPN1L	100	59.596	ENSG00000205022	PABPN1L	99	63.158	Homo_sapiens
ENSCHIG00000013987	PABPN1L	74	51.244	ENSACAG00000013250	PABPN1L	99	51.244	Anolis_carolinensis
ENSCHIG00000013987	PABPN1L	100	56.655	ENSANAG00000038178	PABPN1L	100	57.483	Aotus_nancymaae
ENSCHIG00000013987	PABPN1L	54	48.344	ENSAMXG00000010873	PABPN1L	58	49.689	Astyanax_mexicanus
ENSCHIG00000013987	PABPN1L	100	79.078	ENSBTAG00000023752	-	100	82.624	Bos_taurus
ENSCHIG00000013987	PABPN1L	100	56.803	ENSCJAG00000045284	PABPN1L	100	57.627	Callithrix_jacchus
ENSCHIG00000013987	PABPN1L	92	61.111	ENSCAPG00000007240	PABPN1L	100	62.593	Cavia_aperea
ENSCHIG00000013987	PABPN1L	89	63.241	ENSCPOG00000025951	PABPN1L	100	62.676	Cavia_porcellus
ENSCHIG00000013987	PABPN1L	100	55.973	ENSCCAG00000027631	PABPN1L	100	56.314	Cebus_capucinus
ENSCHIG00000013987	PABPN1L	100	60.068	ENSCATG00000031060	PABPN1L	99	64.184	Cercocebus_atys
ENSCHIG00000013987	PABPN1L	100	61.484	ENSCLAG00000000704	PABPN1L	100	62.544	Chinchilla_lanigera
ENSCHIG00000013987	PABPN1L	100	58.065	ENSCSAG00000002881	PABPN1L	99	60.943	Chlorocebus_sabaeus
ENSCHIG00000013987	PABPN1L	99	45.091	ENSCPBG00000023441	PABPN1L	80	45.455	Chrysemys_picta_bellii
ENSCHIG00000013987	PABPN1L	100	58.503	ENSCANG00000039336	PABPN1L	100	60.339	Colobus_angolensis_palliatus
ENSCHIG00000013987	PABPN1L	100	60.690	ENSCGRG00001013211	Pabpn1l	100	60.690	Cricetulus_griseus_chok1gshd
ENSCHIG00000013987	PABPN1L	100	60.690	ENSCGRG00000015868	Pabpn1l	100	60.690	Cricetulus_griseus_crigri
ENSCHIG00000013987	PABPN1L	100	53.472	ENSDNOG00000034677	PABPN1L	100	54.861	Dasypus_novemcinctus
ENSCHIG00000013987	PABPN1L	100	70.877	ENSEASG00005000777	PABPN1L	100	71.014	Equus_asinus_asinus
ENSCHIG00000013987	PABPN1L	93	78.906	ENSECAG00000000378	PABPN1L	100	78.906	Equus_caballus
ENSCHIG00000013987	PABPN1L	100	58.909	ENSEEUG00000004747	PABPN1L	100	58.909	Erinaceus_europaeus
ENSCHIG00000013987	PABPN1L	100	68.421	ENSFCAG00000010465	PABPN1L	99	72.161	Felis_catus
ENSCHIG00000013987	PABPN1L	76	51.456	ENSFALG00000003319	PABPN1L	80	50.962	Ficedula_albicollis
ENSCHIG00000013987	PABPN1L	100	61.131	ENSFDAG00000021067	PABPN1L	100	62.544	Fukomys_damarensis
ENSCHIG00000013987	PABPN1L	51	57.595	ENSGALG00000006242	PABPN1L	72	68.421	Gallus_gallus
ENSCHIG00000013987	PABPN1L	91	45.817	ENSGAGG00000010613	PABPN1L	79	45.817	Gopherus_agassizii
ENSCHIG00000013987	PABPN1L	100	59.044	ENSGGOG00000012670	PABPN1L	99	63.475	Gorilla_gorilla
ENSCHIG00000013987	PABPN1L	93	64.259	ENSHGLG00000014207	PABPN1L	100	66.160	Heterocephalus_glaber_female
ENSCHIG00000013987	PABPN1L	93	64.259	ENSHGLG00100005230	PABPN1L	100	66.160	Heterocephalus_glaber_male
ENSCHIG00000013987	PABPN1L	100	56.610	ENSSTOG00000020814	PABPN1L	98	60.498	Ictidomys_tridecemlineatus
ENSCHIG00000013987	PABPN1L	100	58.947	ENSJJAG00000006433	Pabpn1l	100	58.947	Jaculus_jaculus
ENSCHIG00000013987	PABPN1L	74	60.976	ENSLAFG00000025902	-	78	60.976	Loxodonta_africana
ENSCHIG00000013987	PABPN1L	100	59.727	ENSMFAG00000002924	PABPN1L	99	63.701	Macaca_fascicularis
ENSCHIG00000013987	PABPN1L	100	58.562	ENSMMUG00000012438	PABPN1L	99	62.500	Macaca_mulatta
ENSCHIG00000013987	PABPN1L	100	59.727	ENSMNEG00000044808	PABPN1L	99	63.701	Macaca_nemestrina
ENSCHIG00000013987	PABPN1L	100	60.068	ENSMLEG00000032667	PABPN1L	99	64.057	Mandrillus_leucophaeus
ENSCHIG00000013987	PABPN1L	100	58.188	ENSMAUG00000014032	Pabpn1l	100	59.489	Mesocricetus_auratus
ENSCHIG00000013987	PABPN1L	100	64.041	ENSMICG00000028179	PABPN1L	100	64.505	Microcebus_murinus
ENSCHIG00000013987	PABPN1L	100	61.806	ENSMOCG00000007955	Pabpn1l	100	61.806	Microtus_ochrogaster
ENSCHIG00000013987	PABPN1L	100	47.312	ENSMODG00000003873	-	100	47.312	Monodelphis_domestica
ENSCHIG00000013987	PABPN1L	100	61.754	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	61.754	Mus_caroli
ENSCHIG00000013987	PABPN1L	100	62.105	ENSMUSG00000069867	Pabpn1l	100	62.105	Mus_musculus
ENSCHIG00000013987	PABPN1L	100	61.404	MGP_PahariEiJ_G0023268	Pabpn1l	100	61.404	Mus_pahari
ENSCHIG00000013987	PABPN1L	100	61.538	MGP_SPRETEiJ_G0032788	Pabpn1l	100	61.538	Mus_spretus
ENSCHIG00000013987	PABPN1L	97	55.235	ENSMLUG00000003228	PABPN1L	95	55.235	Myotis_lucifugus
ENSCHIG00000013987	PABPN1L	100	62.414	ENSNGAG00000023992	Pabpn1l	100	62.414	Nannospalax_galili
ENSCHIG00000013987	PABPN1L	100	62.676	ENSOPRG00000005597	PABPN1L	100	62.676	Ochotona_princeps
ENSCHIG00000013987	PABPN1L	100	58.249	ENSODEG00000004649	PABPN1L	100	58.249	Octodon_degus
ENSCHIG00000013987	PABPN1L	100	50.179	ENSOANG00000013901	PABPN1L	100	51.971	Ornithorhynchus_anatinus
ENSCHIG00000013987	PABPN1L	62	46.707	ENSORLG00000026560	PABPN1L	63	46.707	Oryzias_latipes
ENSCHIG00000013987	PABPN1L	62	46.707	ENSORLG00020015068	PABPN1L	63	46.707	Oryzias_latipes_hni
ENSCHIG00000013987	PABPN1L	62	46.707	ENSORLG00015000397	PABPN1L	63	46.707	Oryzias_latipes_hsok
ENSCHIG00000013987	PABPN1L	76	44.444	ENSOMEG00000017896	PABPN1L	56	44.444	Oryzias_melastigma
ENSCHIG00000013987	PABPN1L	100	62.543	ENSOGAG00000000433	PABPN1L	100	62.887	Otolemur_garnettii
ENSCHIG00000013987	PABPN1L	100	76.452	ENSOARG00000013682	PABPN1L	100	78.710	Ovis_aries
ENSCHIG00000013987	PABPN1L	100	60.269	ENSPPAG00000028866	PABPN1L	99	63.509	Pan_paniscus
ENSCHIG00000013987	PABPN1L	100	68.421	ENSPPRG00000015106	PABPN1L	99	72.161	Panthera_pardus
ENSCHIG00000013987	PABPN1L	90	63.359	ENSPTIG00000015606	PABPN1L	100	64.504	Panthera_tigris_altaica
ENSCHIG00000013987	PABPN1L	100	60.269	ENSPTRG00000031120	PABPN1L	99	63.509	Pan_troglodytes
ENSCHIG00000013987	PABPN1L	100	59.386	ENSPANG00000026039	PABPN1L	99	63.345	Papio_anubis
ENSCHIG00000013987	PABPN1L	74	50.476	ENSPSIG00000003404	PABPN1L	100	50.000	Pelodiscus_sinensis
ENSCHIG00000013987	PABPN1L	100	62.456	ENSPEMG00000016624	Pabpn1l	100	62.456	Peromyscus_maniculatus_bairdii
ENSCHIG00000013987	PABPN1L	51	53.165	ENSPCIG00000007038	-	88	61.654	Phascolarctos_cinereus
ENSCHIG00000013987	PABPN1L	100	60.000	ENSPPYG00000007655	PABPN1L	99	64.085	Pongo_abelii
ENSCHIG00000013987	PABPN1L	100	65.172	ENSPCOG00000024077	PABPN1L	100	65.172	Propithecus_coquereli
ENSCHIG00000013987	PABPN1L	100	67.361	ENSPVAG00000002716	PABPN1L	97	71.956	Pteropus_vampyrus
ENSCHIG00000013987	PABPN1L	100	59.722	ENSRNOG00000029558	Pabpn1l	100	60.764	Rattus_norvegicus
ENSCHIG00000013987	PABPN1L	100	60.410	ENSRBIG00000030740	PABPN1L	99	64.539	Rhinopithecus_bieti
ENSCHIG00000013987	PABPN1L	100	59.524	ENSRROG00000032240	-	99	63.830	Rhinopithecus_roxellana
ENSCHIG00000013987	PABPN1L	99	59.247	ENSRROG00000035483	-	99	63.121	Rhinopithecus_roxellana
ENSCHIG00000013987	PABPN1L	100	56.507	ENSSBOG00000018410	PABPN1L	100	57.288	Saimiri_boliviensis_boliviensis
ENSCHIG00000013987	PABPN1L	100	46.333	ENSSHAG00000010001	-	100	46.333	Sarcophilus_harrisii
ENSCHIG00000013987	PABPN1L	93	51.394	ENSSARG00000005178	-	99	51.394	Sorex_araneus
ENSCHIG00000013987	PABPN1L	73	52.970	ENSSPUG00000007031	PABPN1L	84	53.202	Sphenodon_punctatus
ENSCHIG00000013987	PABPN1L	100	72.202	ENSSSCG00000036367	PABPN1L	100	75.269	Sus_scrofa
ENSCHIG00000013987	PABPN1L	59	43.195	ENSTRUG00000024725	PABPN1L	71	44.633	Takifugu_rubripes
ENSCHIG00000013987	PABPN1L	100	73.333	ENSTTRG00000004691	PABPN1L	99	76.557	Tursiops_truncatus
ENSCHIG00000013987	PABPN1L	60	46.667	ENSXETG00000011258	pabpn1l	92	45.972	Xenopus_tropicalis