EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000014018 (Gene tree)
Gene ID: -
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 30086 bases
Position: chr25:35226189-35256274
Accession: 102182371
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000012143	cwf21	PF08312.12	6.8e-13	1	1
ENSCHIP00000012137	cwf21	PF08312.12	8.1e-13	1	1
ENSCHIP00000012137	SRRM_C	PF15230.6	4.2e-24	1	1
ENSCHIP00000012143	SRRM_C	PF15230.6	3.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000019927	SRRM3-201	1827	-	ENSCHIP00000012137	608 (aa)	-	UPI000D196F58
ENSCHIT00000019933	SRRM3-202	1677	XM_018040992	ENSCHIP00000012143	558 (aa)	XP_017896481	UPI000D1966D8

Gene Model

Click here to download ENSCHIG00000014018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000014018's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000014018	SRRM3	55	83.280	ENSBTAG00000007879	-	99	82.958	Bos_taurus
ENSCHIG00000014018	SRRM3	97	69.931	ENSCAFG00000013537	SRRM3	73	76.817	Canis_familiaris
ENSCHIG00000014018	SRRM3	59	87.915	ENSCAFG00020013073	SRRM3	91	86.129	Canis_lupus_dingo
ENSCHIG00000014018	SRRM3	59	84.685	ENSCCAG00000033359	SRRM3	53	84.685	Cebus_capucinus
ENSCHIG00000014018	SRRM3	87	87.500	ENSCLAG00000007682	SRRM3	100	91.129	Chinchilla_lanigera
ENSCHIG00000014018	SRRM3	97	77.509	ENSCGRG00001011385	Srrm3	55	74.586	Cricetulus_griseus_chok1gshd
ENSCHIG00000014018	SRRM3	57	75.000	ENSDNOG00000046922	SRRM3	56	56.250	Dasypus_novemcinctus
ENSCHIG00000014018	SRRM3	54	78.806	ENSEASG00005016840	-	89	79.403	Equus_asinus_asinus
ENSCHIG00000014018	SRRM3	54	78.743	ENSECAG00000022142	-	89	79.341	Equus_caballus
ENSCHIG00000014018	SRRM3	59	78.453	ENSFCAG00000044112	SRRM3	55	78.729	Felis_catus
ENSCHIG00000014018	SRRM3	59	74.052	ENSHGLG00000015576	SRRM3	100	91.129	Heterocephalus_glaber_female
ENSCHIG00000014018	SRRM3	80	87.313	ENSSTOG00000014181	SRRM3	100	90.323	Ictidomys_tridecemlineatus
ENSCHIG00000014018	SRRM3	97	70.945	ENSMAUG00000017613	Srrm3	100	87.903	Mesocricetus_auratus
ENSCHIG00000014018	SRRM3	97	75.087	ENSMOCG00000002565	Srrm3	55	74.309	Microtus_ochrogaster
ENSCHIG00000014018	SRRM3	55	70.326	MGP_CAROLIEiJ_G0027845	-	98	75.893	Mus_caroli
ENSCHIG00000014018	SRRM3	97	75.260	ENSMUSG00000039860	Srrm3	100	89.516	Mus_musculus
ENSCHIG00000014018	SRRM3	97	74.740	MGP_PahariEiJ_G0024425	Srrm3	100	88.710	Mus_pahari
ENSCHIG00000014018	SRRM3	97	75.433	MGP_SPRETEiJ_G0028844	Srrm3	100	90.323	Mus_spretus
ENSCHIG00000014018	SRRM3	56	78.125	ENSNLEG00000008423	-	56	78.125	Nomascus_leucogenys
ENSCHIG00000014018	SRRM3	97	81.801	ENSODEG00000015988	SRRM3	64	80.967	Octodon_degus
ENSCHIG00000014018	SRRM3	97	46.959	ENSOANG00000004590	-	60	48.895	Ornithorhynchus_anatinus
ENSCHIG00000014018	SRRM3	56	70.787	ENSOARG00000013722	SRRM3	55	72.626	Ovis_aries
ENSCHIG00000014018	SRRM3	55	77.686	ENSPCAG00000013700	SRRM3	77	77.686	Procavia_capensis
ENSCHIG00000014018	SRRM3	54	91.667	ENSPVAG00000003400	SRRM3	55	66.022	Pteropus_vampyrus
ENSCHIG00000014018	SRRM3	97	74.913	ENSRNOG00000001439	Srrm3	55	74.586	Rattus_norvegicus
ENSCHIG00000014018	SRRM3	59	87.576	ENSSSCG00000032250	SRRM3	52	87.576	Sus_scrofa
ENSCHIG00000014018	SRRM3	65	81.818	ENSTTRG00000014836	-	67	81.818	Tursiops_truncatus