EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000014060 (Gene tree)
Gene ID: 100860796
Gene Symbol: RAB1A
Alias: -
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 13797 bases
Position: chr11:63202893-63216689
Accession: 100860796
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000012252	MMR_HSR1	PF01926.23	1.8e-05	1	1
ENSCHIP00000012267	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000020042	-	618	-	ENSCHIP00000012252	205 (aa)	-	UPI000D191AF5
ENSCHIT00000020061	-	489	-	ENSCHIP00000012271	162 (aa)	-	UPI000D18EB40
ENSCHIT00000020057	-	621	-	ENSCHIP00000012267	206 (aa)	-	UPI000D18E512

Gene Model

Click here to download ENSCHIG00000014060's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000014060's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000014060	RAB1A	82	50.000	ENSCHIG00000016103	RAB12	70	50.000
ENSCHIG00000014060	RAB1A	99	41.148	ENSCHIG00000018911	RAB25	98	41.148
ENSCHIG00000014060	RAB1A	88	46.703	ENSCHIG00000008749	RAB18	93	45.876
ENSCHIG00000014060	RAB1A	93	54.737	ENSCHIG00000022271	-	91	54.737
ENSCHIG00000014060	RAB1A	80	37.805	ENSCHIG00000026575	KRAS	95	35.912
ENSCHIG00000014060	RAB1A	87	33.514	ENSCHIG00000011004	RERG	90	33.514
ENSCHIG00000014060	RAB1A	96	46.305	ENSCHIG00000017531	-	98	46.305
ENSCHIG00000014060	RAB1A	97	44.949	ENSCHIG00000020601	RAB30	92	44.949
ENSCHIG00000014060	RAB1A	96	93.401	ENSCHIG00000015549	RAB1B	98	93.401
ENSCHIG00000014060	RAB1A	83	35.227	ENSCHIG00000025837	MRAS	84	35.227
ENSCHIG00000014060	RAB1A	57	31.092	ENSCHIG00000008457	ARL4C	61	31.092
ENSCHIG00000014060	RAB1A	78	51.250	ENSCHIG00000025288	RAB15	75	51.250
ENSCHIG00000014060	RAB1A	95	39.175	ENSCHIG00000000146	RAB31	97	39.175
ENSCHIG00000014060	RAB1A	99	43.779	ENSCHIG00000022426	-	97	43.779
ENSCHIG00000014060	RAB1A	80	44.643	ENSCHIG00000020393	RAB33B	73	44.643
ENSCHIG00000014060	RAB1A	78	39.264	ENSCHIG00000001138	RAB7A	79	39.264
ENSCHIG00000014060	RAB1A	83	44.767	ENSCHIG00000000158	RAB39B	81	44.767
ENSCHIG00000014060	RAB1A	57	33.333	ENSCHIG00000006468	ARL14	59	33.333
ENSCHIG00000014060	RAB1A	76	39.623	ENSCHIG00000001895	RAB9A	78	39.623
ENSCHIG00000014060	RAB1A	95	43.367	ENSCHIG00000025419	-	90	43.367
ENSCHIG00000014060	RAB1A	94	38.384	ENSCHIG00000023957	RAB6A	94	38.384
ENSCHIG00000014060	RAB1A	94	35.714	ENSCHIG00000021370	RAB36	70	35.714
ENSCHIG00000014060	RAB1A	95	43.367	ENSCHIG00000010333	RAB5B	89	43.367
ENSCHIG00000014060	RAB1A	57	33.058	ENSCHIG00000021231	ARL2-SNX15	61	33.058
ENSCHIG00000014060	RAB1A	60	32.540	ENSCHIG00000011984	ARL4A	63	32.540
ENSCHIG00000014060	RAB1A	80	38.415	ENSCHIG00000023175	NRAS	86	38.415
ENSCHIG00000014060	RAB1A	94	45.596	ENSCHIG00000026983	RAB14	89	45.596
ENSCHIG00000014060	RAB1A	84	35.028	ENSCHIG00000004808	HRAS	93	35.028
ENSCHIG00000014060	RAB1A	76	39.623	ENSCHIG00000002776	RAB9B	79	39.623
ENSCHIG00000014060	RAB1A	95	37.629	ENSCHIG00000017305	RAB22A	95	42.038
ENSCHIG00000014060	RAB1A	65	31.206	ENSCHIG00000005944	ARL4D	70	31.206
ENSCHIG00000014060	RAB1A	57	34.746	ENSCHIG00000003028	ARL8A	61	34.746
ENSCHIG00000014060	RAB1A	96	46.829	ENSCHIG00000012183	-	95	46.829
ENSCHIG00000014060	RAB1A	75	35.948	ENSCHIG00000000591	-	65	35.948
ENSCHIG00000014060	RAB1A	82	32.544	ENSCHIG00000017350	RHEB	91	32.544
ENSCHIG00000014060	RAB1A	95	42.564	ENSCHIG00000012960	RAB5C	89	42.564
ENSCHIG00000014060	RAB1A	80	34.545	ENSCHIG00000009815	RAB23	69	34.545
ENSCHIG00000014060	RAB1A	89	48.087	ENSCHIG00000020374	RAB2A	98	45.673
ENSCHIG00000014060	RAB1A	77	39.752	ENSCHIG00000014703	RAB34	62	39.752
ENSCHIG00000014060	RAB1A	94	36.410	ENSCHIG00000016452	RAB6B	94	36.410

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000014060	RAB1A	96	100.000	ENSG00000138069	RAB1A	96	100.000	Homo_sapiens
ENSCHIG00000014060	RAB1A	100	92.683	ENSAPOG00000008143	-	98	95.431	Acanthochromis_polyacanthus
ENSCHIG00000014060	RAB1A	99	99.507	ENSAMEG00000001127	RAB1A	99	99.507	Ailuropoda_melanoleuca
ENSCHIG00000014060	RAB1A	100	92.683	ENSAOCG00000020606	-	99	95.431	Amphiprion_ocellaris
ENSCHIG00000014060	RAB1A	100	92.683	ENSAPEG00000022488	-	98	95.431	Amphiprion_percula
ENSCHIG00000014060	RAB1A	96	100.000	ENSANAG00000020929	RAB1A	96	100.000	Aotus_nancymaae
ENSCHIG00000014060	RAB1A	100	93.171	ENSACLG00000003326	-	98	95.939	Astatotilapia_calliptera
ENSCHIG00000014060	RAB1A	100	91.707	ENSAMXG00000034850	-	98	94.416	Astyanax_mexicanus
ENSCHIG00000014060	RAB1A	96	100.000	ENSBTAG00000016720	RAB1A	99	100.000	Bos_taurus
ENSCHIG00000014060	RAB1A	96	100.000	ENSCJAG00000046275	RAB1A	99	100.000	Callithrix_jacchus
ENSCHIG00000014060	RAB1A	96	100.000	ENSCAFG00000003187	RAB1A	96	100.000	Canis_familiaris
ENSCHIG00000014060	RAB1A	96	100.000	ENSCAFG00020026971	RAB1A	96	100.000	Canis_lupus_dingo
ENSCHIG00000014060	RAB1A	100	97.087	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSCHIG00000014060	RAB1A	96	100.000	ENSCPOG00000015437	RAB1A	96	100.000	Cavia_porcellus
ENSCHIG00000014060	RAB1A	99	97.537	ENSCCAG00000021869	RAB1A	97	100.000	Cebus_capucinus
ENSCHIG00000014060	RAB1A	99	99.512	ENSCATG00000030853	RAB1A	100	98.030	Cercocebus_atys
ENSCHIG00000014060	RAB1A	96	100.000	ENSCLAG00000014766	RAB1A	96	100.000	Chinchilla_lanigera
ENSCHIG00000014060	RAB1A	100	96.585	ENSCPBG00000013243	RAB1A	99	96.585	Chrysemys_picta_bellii
ENSCHIG00000014060	RAB1A	99	97.073	ENSCANG00000035916	RAB1A	99	97.462	Colobus_angolensis_palliatus
ENSCHIG00000014060	RAB1A	96	100.000	ENSCGRG00001012691	-	97	100.000	Cricetulus_griseus_chok1gshd
ENSCHIG00000014060	RAB1A	96	100.000	ENSCGRG00000008456	-	97	100.000	Cricetulus_griseus_crigri
ENSCHIG00000014060	RAB1A	96	100.000	ENSDNOG00000018236	RAB1A	96	100.000	Dasypus_novemcinctus
ENSCHIG00000014060	RAB1A	96	100.000	ENSDORG00000028628	-	96	100.000	Dipodomys_ordii
ENSCHIG00000014060	RAB1A	96	84.343	FBgn0285937	Rab1	96	84.343	Drosophila_melanogaster
ENSCHIG00000014060	RAB1A	96	100.000	ENSETEG00000002205	RAB1A	98	100.000	Echinops_telfairi
ENSCHIG00000014060	RAB1A	96	100.000	ENSEASG00005007298	RAB1A	96	100.000	Equus_asinus_asinus
ENSCHIG00000014060	RAB1A	96	100.000	ENSECAG00000009926	RAB1A	96	100.000	Equus_caballus
ENSCHIG00000014060	RAB1A	96	100.000	ENSEEUG00000011721	RAB1A	98	100.000	Erinaceus_europaeus
ENSCHIG00000014060	RAB1A	96	95.477	ENSELUG00000012166	RAB1A	93	95.477	Esox_lucius
ENSCHIG00000014060	RAB1A	96	100.000	ENSFCAG00000002536	RAB1A	96	100.000	Felis_catus
ENSCHIG00000014060	RAB1A	100	97.573	ENSFALG00000013624	RAB1A	99	97.537	Ficedula_albicollis
ENSCHIG00000014060	RAB1A	96	100.000	ENSFDAG00000019505	-	96	100.000	Fukomys_damarensis
ENSCHIG00000014060	RAB1A	100	91.707	ENSFHEG00000014414	-	98	94.416	Fundulus_heteroclitus
ENSCHIG00000014060	RAB1A	100	96.585	ENSGALG00000031582	RAB1A	99	96.585	Gallus_gallus
ENSCHIG00000014060	RAB1A	100	91.707	ENSGAFG00000000918	-	98	94.416	Gambusia_affinis
ENSCHIG00000014060	RAB1A	100	96.585	ENSGAGG00000006802	RAB1A	99	96.585	Gopherus_agassizii
ENSCHIG00000014060	RAB1A	98	99.000	ENSGGOG00000026603	RAB1A	99	100.000	Gorilla_gorilla
ENSCHIG00000014060	RAB1A	100	97.561	ENSHGLG00000013585	RAB1A	97	100.000	Heterocephalus_glaber_female
ENSCHIG00000014060	RAB1A	100	97.561	ENSHGLG00100007994	RAB1A	97	100.000	Heterocephalus_glaber_male
ENSCHIG00000014060	RAB1A	96	100.000	ENSSTOG00000020693	-	99	98.995	Ictidomys_tridecemlineatus
ENSCHIG00000014060	RAB1A	96	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSCHIG00000014060	RAB1A	99	93.627	ENSKMAG00000014038	-	97	93.627	Kryptolebias_marmoratus
ENSCHIG00000014060	RAB1A	100	92.195	ENSLBEG00000028426	RAB1A	98	94.924	Labrus_bergylta
ENSCHIG00000014060	RAB1A	96	98.985	ENSLACG00000012869	RAB1A	96	98.985	Latimeria_chalumnae
ENSCHIG00000014060	RAB1A	97	99.497	ENSLAFG00000016666	RAB1A	100	97.073	Loxodonta_africana
ENSCHIG00000014060	RAB1A	99	99.512	ENSMFAG00000046246	RAB1A	96	100.000	Macaca_fascicularis
ENSCHIG00000014060	RAB1A	99	99.512	ENSMMUG00000021721	RAB1A	95	99.512	Macaca_mulatta
ENSCHIG00000014060	RAB1A	95	96.392	ENSMNEG00000028414	-	93	99.462	Macaca_nemestrina
ENSCHIG00000014060	RAB1A	99	98.039	ENSMLEG00000042535	RAB1A	99	98.039	Mandrillus_leucophaeus
ENSCHIG00000014060	RAB1A	100	93.171	ENSMZEG00005013959	-	98	95.939	Maylandia_zebra
ENSCHIG00000014060	RAB1A	98	99.010	ENSMGAG00000004611	RAB1A	100	99.010	Meleagris_gallopavo
ENSCHIG00000014060	RAB1A	96	99.492	ENSMAUG00000012156	Rab1a	97	99.492	Mesocricetus_auratus
ENSCHIG00000014060	RAB1A	96	100.000	ENSMICG00000012587	RAB1A	96	100.000	Microcebus_murinus
ENSCHIG00000014060	RAB1A	96	99.492	ENSMOCG00000017022	Rab1a	98	99.492	Microtus_ochrogaster
ENSCHIG00000014060	RAB1A	100	90.732	ENSMMOG00000018709	RAB1A	100	90.732	Mola_mola
ENSCHIG00000014060	RAB1A	100	96.585	ENSMODG00000003340	RAB1A	99	96.585	Monodelphis_domestica
ENSCHIG00000014060	RAB1A	96	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	96	100.000	Mus_caroli
ENSCHIG00000014060	RAB1A	96	100.000	ENSMUSG00000020149	Rab1a	98	100.000	Mus_musculus
ENSCHIG00000014060	RAB1A	96	100.000	MGP_PahariEiJ_G0016776	Rab1a	96	100.000	Mus_pahari
ENSCHIG00000014060	RAB1A	96	100.000	MGP_SPRETEiJ_G0016958	Rab1a	98	100.000	Mus_spretus
ENSCHIG00000014060	RAB1A	96	100.000	ENSMPUG00000006139	RAB1A	78	100.000	Mustela_putorius_furo
ENSCHIG00000014060	RAB1A	96	100.000	ENSMLUG00000009489	RAB1A	96	100.000	Myotis_lucifugus
ENSCHIG00000014060	RAB1A	96	100.000	ENSNGAG00000005838	Rab1a	96	100.000	Nannospalax_galili
ENSCHIG00000014060	RAB1A	100	93.171	ENSNBRG00000020492	-	98	95.939	Neolamprologus_brichardi
ENSCHIG00000014060	RAB1A	96	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSCHIG00000014060	RAB1A	94	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSCHIG00000014060	RAB1A	96	93.909	ENSONIG00000006819	-	97	93.909	Oreochromis_niloticus
ENSCHIG00000014060	RAB1A	100	96.585	ENSOANG00000012438	RAB1A	99	96.585	Ornithorhynchus_anatinus
ENSCHIG00000014060	RAB1A	96	100.000	ENSOCUG00000017003	RAB1A	96	100.000	Oryctolagus_cuniculus
ENSCHIG00000014060	RAB1A	96	100.000	ENSOGAG00000026181	RAB1A	96	100.000	Otolemur_garnettii
ENSCHIG00000014060	RAB1A	99	100.000	ENSOARG00000019997	RAB1A	100	100.000	Ovis_aries
ENSCHIG00000014060	RAB1A	98	99.000	ENSPPAG00000030253	RAB1A	98	100.000	Pan_paniscus
ENSCHIG00000014060	RAB1A	96	100.000	ENSPPRG00000025077	RAB1A	96	100.000	Panthera_pardus
ENSCHIG00000014060	RAB1A	99	99.020	ENSPTIG00000013471	RAB1A	100	99.020	Panthera_tigris_altaica
ENSCHIG00000014060	RAB1A	98	99.000	ENSPTRG00000011989	RAB1A	99	99.000	Pan_troglodytes
ENSCHIG00000014060	RAB1A	99	99.512	ENSPANG00000010485	RAB1A	100	98.030	Papio_anubis
ENSCHIG00000014060	RAB1A	98	99.000	ENSPSIG00000008028	RAB1A	98	99.000	Pelodiscus_sinensis
ENSCHIG00000014060	RAB1A	100	93.171	ENSPMGG00000021015	-	99	93.171	Periophthalmus_magnuspinnatus
ENSCHIG00000014060	RAB1A	96	100.000	ENSPEMG00000009340	Rab1a	97	100.000	Peromyscus_maniculatus_bairdii
ENSCHIG00000014060	RAB1A	100	96.585	ENSPCIG00000023212	RAB1A	99	96.585	Phascolarctos_cinereus
ENSCHIG00000014060	RAB1A	100	91.220	ENSPFOG00000000498	-	98	91.220	Poecilia_formosa
ENSCHIG00000014060	RAB1A	100	91.220	ENSPLAG00000015592	-	98	93.909	Poecilia_latipinna
ENSCHIG00000014060	RAB1A	100	91.220	ENSPMEG00000005288	-	98	93.909	Poecilia_mexicana
ENSCHIG00000014060	RAB1A	97	99.495	ENSPPYG00000012360	RAB1A	97	99.495	Pongo_abelii
ENSCHIG00000014060	RAB1A	99	97.073	ENSPCOG00000017244	RAB1A	97	99.495	Propithecus_coquereli
ENSCHIG00000014060	RAB1A	100	93.171	ENSPNYG00000015841	-	98	95.939	Pundamilia_nyererei
ENSCHIG00000014060	RAB1A	96	100.000	ENSRNOG00000004992	Rab1a	96	100.000	Rattus_norvegicus
ENSCHIG00000014060	RAB1A	96	100.000	ENSSBOG00000023732	RAB1A	96	100.000	Saimiri_boliviensis_boliviensis
ENSCHIG00000014060	RAB1A	99	98.030	ENSSHAG00000003597	RAB1A	97	98.500	Sarcophilus_harrisii
ENSCHIG00000014060	RAB1A	100	92.683	ENSSMAG00000021049	-	98	95.431	Scophthalmus_maximus
ENSCHIG00000014060	RAB1A	100	93.171	ENSSDUG00000022535	RAB1A	98	95.939	Seriola_dumerili
ENSCHIG00000014060	RAB1A	100	96.585	ENSSPUG00000012822	RAB1A	99	96.585	Sphenodon_punctatus
ENSCHIG00000014060	RAB1A	100	92.683	ENSSPAG00000012564	-	98	95.431	Stegastes_partitus
ENSCHIG00000014060	RAB1A	97	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSCHIG00000014060	RAB1A	96	99.492	ENSTGUG00000002328	RAB1A	96	99.492	Taeniopygia_guttata
ENSCHIG00000014060	RAB1A	100	92.195	ENSTRUG00000024994	RAB1A	98	94.924	Takifugu_rubripes
ENSCHIG00000014060	RAB1A	97	100.000	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSCHIG00000014060	RAB1A	98	98.507	ENSVPAG00000005640	RAB1A	100	98.507	Vicugna_pacos
ENSCHIG00000014060	RAB1A	96	100.000	ENSVVUG00000027588	RAB1A	96	100.000	Vulpes_vulpes
ENSCHIG00000014060	RAB1A	100	91.707	ENSXMAG00000015776	-	98	94.416	Xiphophorus_maculatus