EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000014431 (Gene tree)
Gene ID: 102175797
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 24996 bases
Position: chr19:47655851-47680846
Accession: 102175797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000012823	ResIII	PF04851.15	6.8e-07	1	1
ENSCHIP00000012820	ResIII	PF04851.15	7.4e-07	1	1
ENSCHIP00000012823	DEAD	PF00270.29	6.3e-50	1	1
ENSCHIP00000012820	DEAD	PF00270.29	7e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000020614	DDX42-202	2727	-	ENSCHIP00000012823	908 (aa)	-	UPI000D1969B7
ENSCHIT00000020611	DDX42-201	2820	XM_005693992	ENSCHIP00000012820	939 (aa)	XP_005694049	UPI000D197AEE

Gene Model

Click here to download ENSCHIG00000014431's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000014431's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000014431	DDX42	54	43.651	ENSCHIG00000026009	DDX46	50	43.452
ENSCHIG00000014431	DDX42	60	38.036	ENSCHIG00000011800	DDX5	78	40.535

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000014431	DDX42	100	95.122	ENSG00000198231	DDX42	100	98.077	Homo_sapiens
ENSCHIG00000014431	DDX42	94	76.042	ENSAPOG00000017675	ddx42	98	74.831	Acanthochromis_polyacanthus
ENSCHIG00000014431	DDX42	100	96.277	ENSAMEG00000003200	DDX42	100	96.277	Ailuropoda_melanoleuca
ENSCHIG00000014431	DDX42	85	72.466	ENSACIG00000007376	ddx42	99	73.342	Amphilophus_citrinellus
ENSCHIG00000014431	DDX42	100	71.757	ENSAOCG00000003520	ddx42	99	73.391	Amphiprion_ocellaris
ENSCHIG00000014431	DDX42	100	72.081	ENSAPEG00000000984	ddx42	99	73.441	Amphiprion_percula
ENSCHIG00000014431	DDX42	100	72.639	ENSATEG00000022920	ddx42	99	72.727	Anabas_testudineus
ENSCHIG00000014431	DDX42	100	85.075	ENSAPLG00000010544	DDX42	100	84.599	Anas_platyrhynchos
ENSCHIG00000014431	DDX42	100	84.318	ENSACAG00000003994	DDX42	99	84.000	Anolis_carolinensis
ENSCHIG00000014431	DDX42	100	95.314	ENSANAG00000035693	DDX42	99	97.589	Aotus_nancymaae
ENSCHIG00000014431	DDX42	93	76.733	ENSACLG00000025113	ddx42	99	73.763	Astatotilapia_calliptera
ENSCHIG00000014431	DDX42	83	81.398	ENSAMXG00000011435	ddx42	100	70.113	Astyanax_mexicanus
ENSCHIG00000014431	DDX42	100	97.679	ENSBTAG00000021058	DDX42	100	97.679	Bos_taurus
ENSCHIG00000014431	DDX42	65	52.830	WBGene00008119	C46F11.4	78	53.052	Caenorhabditis_elegans
ENSCHIG00000014431	DDX42	100	95.208	ENSCJAG00000019649	DDX42	99	98.564	Callithrix_jacchus
ENSCHIG00000014431	DDX42	100	96.592	ENSCAFG00000012818	DDX42	100	96.592	Canis_familiaris
ENSCHIG00000014431	DDX42	100	96.699	ENSCAFG00020026631	DDX42	100	96.699	Canis_lupus_dingo
ENSCHIG00000014431	DDX42	100	95.208	ENSTSYG00000001380	DDX42	100	95.101	Carlito_syrichta
ENSCHIG00000014431	DDX42	75	75.664	ENSCAPG00000013621	DDX42	94	75.664	Cavia_aperea
ENSCHIG00000014431	DDX42	100	94.687	ENSCPOG00000005633	DDX42	100	94.687	Cavia_porcellus
ENSCHIG00000014431	DDX42	100	89.563	ENSCCAG00000020612	DDX42	100	94.724	Cebus_capucinus
ENSCHIG00000014431	DDX42	100	95.527	ENSCATG00000030490	DDX42	100	95.527	Cercocebus_atys
ENSCHIG00000014431	DDX42	100	95.106	ENSCLAG00000003497	DDX42	100	95.106	Chinchilla_lanigera
ENSCHIG00000014431	DDX42	100	91.561	ENSCSAG00000003914	DDX42	100	91.456	Chlorocebus_sabaeus
ENSCHIG00000014431	DDX42	79	93.750	ENSCHOG00000006241	DDX42	79	93.750	Choloepus_hoffmanni
ENSCHIG00000014431	DDX42	100	84.688	ENSCPBG00000026682	DDX42	100	83.665	Chrysemys_picta_bellii
ENSCHIG00000014431	DDX42	100	95.634	ENSCANG00000034663	DDX42	99	97.845	Colobus_angolensis_palliatus
ENSCHIG00000014431	DDX42	100	94.249	ENSCGRG00001009775	Ddx42	100	93.823	Cricetulus_griseus_chok1gshd
ENSCHIG00000014431	DDX42	100	94.249	ENSCGRG00000011718	Ddx42	100	93.823	Cricetulus_griseus_crigri
ENSCHIG00000014431	DDX42	92	75.297	ENSCSEG00000021574	ddx42	99	71.892	Cynoglossus_semilaevis
ENSCHIG00000014431	DDX42	100	71.044	ENSCVAG00000011404	ddx42	99	72.216	Cyprinodon_variegatus
ENSCHIG00000014431	DDX42	100	70.394	ENSDARG00000037928	ddx42	100	71.353	Danio_rerio
ENSCHIG00000014431	DDX42	100	88.948	ENSDNOG00000007961	DDX42	100	88.842	Dasypus_novemcinctus
ENSCHIG00000014431	DDX42	100	86.426	ENSDORG00000004199	Ddx42	100	86.108	Dipodomys_ordii
ENSCHIG00000014431	DDX42	67	60.645	FBgn0036104	CG6418	84	57.485	Drosophila_melanogaster
ENSCHIG00000014431	DDX42	82	73.607	ENSEBUG00000001155	ddx42	91	73.475	Eptatretus_burgeri
ENSCHIG00000014431	DDX42	100	96.699	ENSEASG00005013089	DDX42	100	96.699	Equus_asinus_asinus
ENSCHIG00000014431	DDX42	100	96.699	ENSECAG00000022684	DDX42	100	96.699	Equus_caballus
ENSCHIG00000014431	DDX42	68	96.464	ENSEEUG00000009144	DDX42	84	96.464	Erinaceus_europaeus
ENSCHIG00000014431	DDX42	100	71.261	ENSELUG00000020593	ddx42	100	70.276	Esox_lucius
ENSCHIG00000014431	DDX42	100	97.125	ENSFCAG00000003499	DDX42	100	97.125	Felis_catus
ENSCHIG00000014431	DDX42	93	88.159	ENSFALG00000004675	DDX42	74	89.021	Ficedula_albicollis
ENSCHIG00000014431	DDX42	100	94.580	ENSFDAG00000020516	DDX42	100	94.687	Fukomys_damarensis
ENSCHIG00000014431	DDX42	100	69.926	ENSFHEG00000023290	ddx42	99	71.935	Fundulus_heteroclitus
ENSCHIG00000014431	DDX42	78	78.561	ENSGMOG00000004595	ddx42	79	78.561	Gadus_morhua
ENSCHIG00000014431	DDX42	100	83.420	ENSGALG00000000581	DDX42	100	82.988	Gallus_gallus
ENSCHIG00000014431	DDX42	93	74.941	ENSGAFG00000011846	ddx42	96	74.405	Gambusia_affinis
ENSCHIG00000014431	DDX42	100	69.414	ENSGACG00000009782	ddx42	100	67.996	Gasterosteus_aculeatus
ENSCHIG00000014431	DDX42	100	84.864	ENSGAGG00000024411	DDX42	99	83.663	Gopherus_agassizii
ENSCHIG00000014431	DDX42	100	95.421	ENSGGOG00000006779	DDX42	100	95.421	Gorilla_gorilla
ENSCHIG00000014431	DDX42	93	76.968	ENSHBUG00000008705	ddx42	100	73.899	Haplochromis_burtoni
ENSCHIG00000014431	DDX42	100	90.309	ENSHGLG00000010024	DDX42	100	90.309	Heterocephalus_glaber_female
ENSCHIG00000014431	DDX42	100	95.101	ENSHGLG00100004479	-	100	94.995	Heterocephalus_glaber_male
ENSCHIG00000014431	DDX42	96	70.815	ENSHGLG00100007138	-	95	72.159	Heterocephalus_glaber_male
ENSCHIG00000014431	DDX42	87	77.947	ENSHCOG00000003357	ddx42	99	71.021	Hippocampus_comes
ENSCHIG00000014431	DDX42	82	80.185	ENSIPUG00000013327	ddx42	100	71.475	Ictalurus_punctatus
ENSCHIG00000014431	DDX42	100	95.855	ENSSTOG00000008922	DDX42	100	95.643	Ictidomys_tridecemlineatus
ENSCHIG00000014431	DDX42	100	94.468	ENSJJAG00000011727	Ddx42	100	94.468	Jaculus_jaculus
ENSCHIG00000014431	DDX42	100	70.811	ENSKMAG00000009914	ddx42	99	72.912	Kryptolebias_marmoratus
ENSCHIG00000014431	DDX42	83	76.593	ENSLBEG00000004687	ddx42	100	67.766	Labrus_bergylta
ENSCHIG00000014431	DDX42	99	76.670	ENSLACG00000013476	DDX42	97	78.204	Latimeria_chalumnae
ENSCHIG00000014431	DDX42	100	75.108	ENSLOCG00000011764	ddx42	100	75.325	Lepisosteus_oculatus
ENSCHIG00000014431	DDX42	100	96.060	ENSLAFG00000003249	DDX42	100	96.060	Loxodonta_africana
ENSCHIG00000014431	DDX42	100	95.527	ENSMFAG00000031356	DDX42	100	95.527	Macaca_fascicularis
ENSCHIG00000014431	DDX42	100	94.910	ENSMMUG00000016762	DDX42	100	94.804	Macaca_mulatta
ENSCHIG00000014431	DDX42	100	95.527	ENSMNEG00000038250	DDX42	100	95.527	Macaca_nemestrina
ENSCHIG00000014431	DDX42	100	95.334	ENSMLEG00000043080	DDX42	100	95.228	Mandrillus_leucophaeus
ENSCHIG00000014431	DDX42	93	77.150	ENSMAMG00000021888	ddx42	98	73.333	Mastacembelus_armatus
ENSCHIG00000014431	DDX42	93	76.733	ENSMZEG00005023103	ddx42	99	73.763	Maylandia_zebra
ENSCHIG00000014431	DDX42	100	83.731	ENSMGAG00000001822	DDX42	100	82.950	Meleagris_gallopavo
ENSCHIG00000014431	DDX42	78	97.163	ENSMAUG00000020774	-	94	97.163	Mesocricetus_auratus
ENSCHIG00000014431	DDX42	100	95.953	ENSMICG00000009952	DDX42	100	95.314	Microcebus_murinus
ENSCHIG00000014431	DDX42	100	93.504	ENSMOCG00000015504	Ddx42	100	93.504	Microtus_ochrogaster
ENSCHIG00000014431	DDX42	93	72.038	ENSMMOG00000016963	ddx42	85	72.857	Mola_mola
ENSCHIG00000014431	DDX42	51	97.430	ENSMODG00000009917	-	98	97.430	Monodelphis_domestica
ENSCHIG00000014431	DDX42	100	72.425	ENSMALG00000007800	ddx42	99	73.485	Monopterus_albus
ENSCHIG00000014431	DDX42	100	94.462	MGP_CAROLIEiJ_G0017314	Ddx42	100	94.462	Mus_caroli
ENSCHIG00000014431	DDX42	100	94.462	ENSMUSG00000020705	Ddx42	100	94.462	Mus_musculus
ENSCHIG00000014431	DDX42	78	99.404	MGP_PahariEiJ_G0018444	-	100	99.404	Mus_pahari
ENSCHIG00000014431	DDX42	100	94.462	MGP_SPRETEiJ_G0018158	Ddx42	100	94.462	Mus_spretus
ENSCHIG00000014431	DDX42	100	96.186	ENSMPUG00000014921	DDX42	100	96.186	Mustela_putorius_furo
ENSCHIG00000014431	DDX42	100	93.396	ENSMLUG00000011645	DDX42	100	93.487	Myotis_lucifugus
ENSCHIG00000014431	DDX42	100	94.255	ENSNGAG00000021897	Ddx42	100	94.255	Nannospalax_galili
ENSCHIG00000014431	DDX42	93	75.146	ENSNBRG00000004466	ddx42	99	72.581	Neolamprologus_brichardi
ENSCHIG00000014431	DDX42	100	95.208	ENSNLEG00000004248	DDX42	99	97.704	Nomascus_leucogenys
ENSCHIG00000014431	DDX42	75	82.272	ENSMEUG00000013227	-	85	82.272	Notamacropus_eugenii
ENSCHIG00000014431	DDX42	100	94.904	ENSOPRG00000014960	DDX42	100	94.798	Ochotona_princeps
ENSCHIG00000014431	DDX42	100	91.596	ENSODEG00000007810	DDX42	100	91.596	Octodon_degus
ENSCHIG00000014431	DDX42	93	76.968	ENSONIG00000000734	ddx42	99	73.763	Oreochromis_niloticus
ENSCHIG00000014431	DDX42	59	92.393	ENSOANG00000000265	DDX42	100	92.393	Ornithorhynchus_anatinus
ENSCHIG00000014431	DDX42	95	95.307	ENSOCUG00000004304	DDX42	88	95.196	Oryctolagus_cuniculus
ENSCHIG00000014431	DDX42	100	71.567	ENSORLG00000002395	ddx42	100	70.919	Oryzias_latipes
ENSCHIG00000014431	DDX42	100	71.822	ENSORLG00020011621	ddx42	100	72.091	Oryzias_latipes_hni
ENSCHIG00000014431	DDX42	100	71.610	ENSORLG00015004487	ddx42	100	72.414	Oryzias_latipes_hsok
ENSCHIG00000014431	DDX42	92	76.275	ENSOMEG00000020093	ddx42	100	72.953	Oryzias_melastigma
ENSCHIG00000014431	DDX42	100	95.541	ENSOGAG00000006872	DDX42	100	95.435	Otolemur_garnettii
ENSCHIG00000014431	DDX42	100	98.734	ENSOARG00000013540	DDX42	100	98.734	Ovis_aries
ENSCHIG00000014431	DDX42	100	95.634	ENSPPAG00000007496	DDX42	100	95.634	Pan_paniscus
ENSCHIG00000014431	DDX42	100	96.912	ENSPPRG00000002740	DDX42	100	96.912	Panthera_pardus
ENSCHIG00000014431	DDX42	100	96.805	ENSPTIG00000009932	DDX42	100	96.805	Panthera_tigris_altaica
ENSCHIG00000014431	DDX42	100	95.634	ENSPTRG00000009523	DDX42	100	95.634	Pan_troglodytes
ENSCHIG00000014431	DDX42	100	95.527	ENSPANG00000020990	DDX42	100	95.527	Papio_anubis
ENSCHIG00000014431	DDX42	100	71.820	ENSPKIG00000002901	ddx42	100	71.568	Paramormyrops_kingsleyae
ENSCHIG00000014431	DDX42	88	92.308	ENSPSIG00000010289	DDX42	98	92.005	Pelodiscus_sinensis
ENSCHIG00000014431	DDX42	100	68.206	ENSPMGG00000009323	ddx42	100	68.797	Periophthalmus_magnuspinnatus
ENSCHIG00000014431	DDX42	100	94.574	ENSPEMG00000006755	Ddx42	100	94.574	Peromyscus_maniculatus_bairdii
ENSCHIG00000014431	DDX42	82	72.608	ENSPMAG00000005580	ddx42	100	73.263	Petromyzon_marinus
ENSCHIG00000014431	DDX42	100	91.043	ENSPCIG00000009093	DDX42	100	90.306	Phascolarctos_cinereus
ENSCHIG00000014431	DDX42	100	70.397	ENSPFOG00000014104	ddx42	100	72.017	Poecilia_formosa
ENSCHIG00000014431	DDX42	100	70.397	ENSPLAG00000010522	ddx42	100	72.017	Poecilia_latipinna
ENSCHIG00000014431	DDX42	100	69.710	ENSPMEG00000010744	ddx42	100	71.309	Poecilia_mexicana
ENSCHIG00000014431	DDX42	94	75.410	ENSPREG00000009926	ddx42	100	70.693	Poecilia_reticulata
ENSCHIG00000014431	DDX42	100	93.136	ENSPPYG00000008531	DDX42	100	93.031	Pongo_abelii
ENSCHIG00000014431	DDX42	92	89.711	ENSPCAG00000002474	DDX42	100	90.173	Procavia_capensis
ENSCHIG00000014431	DDX42	100	86.262	ENSPCOG00000001559	DDX42	98	89.265	Propithecus_coquereli
ENSCHIG00000014431	DDX42	100	92.553	ENSPVAG00000000160	DDX42	100	92.553	Pteropus_vampyrus
ENSCHIG00000014431	DDX42	77	74.435	ENSPNYG00000013954	ddx42	97	71.283	Pundamilia_nyererei
ENSCHIG00000014431	DDX42	79	81.421	ENSPNAG00000017352	ddx42	100	71.064	Pygocentrus_nattereri
ENSCHIG00000014431	DDX42	100	94.569	ENSRNOG00000009474	Ddx42	100	94.569	Rattus_norvegicus
ENSCHIG00000014431	DDX42	100	95.527	ENSRBIG00000004781	DDX42	99	97.701	Rhinopithecus_bieti
ENSCHIG00000014431	DDX42	100	95.527	ENSRROG00000029794	DDX42	100	95.527	Rhinopithecus_roxellana
ENSCHIG00000014431	DDX42	100	95.208	ENSSBOG00000029624	DDX42	100	95.421	Saimiri_boliviensis_boliviensis
ENSCHIG00000014431	DDX42	100	91.149	ENSSHAG00000012896	-	100	90.411	Sarcophilus_harrisii
ENSCHIG00000014431	DDX42	71	61.652	ENSSHAG00000007919	-	99	60.767	Sarcophilus_harrisii
ENSCHIG00000014431	DDX42	84	80.695	ENSSFOG00015014064	ddx42	83	80.695	Scleropages_formosus
ENSCHIG00000014431	DDX42	100	71.170	ENSSMAG00000009077	ddx42	100	72.251	Scophthalmus_maximus
ENSCHIG00000014431	DDX42	100	72.017	ENSSDUG00000022221	ddx42	99	72.961	Seriola_dumerili
ENSCHIG00000014431	DDX42	100	71.459	ENSSLDG00000018483	ddx42	100	72.000	Seriola_lalandi_dorsalis
ENSCHIG00000014431	DDX42	100	94.782	ENSSARG00000009847	DDX42	100	95.208	Sorex_araneus
ENSCHIG00000014431	DDX42	100	84.013	ENSSPUG00000018806	DDX42	100	84.435	Sphenodon_punctatus
ENSCHIG00000014431	DDX42	94	76.779	ENSSPAG00000013055	ddx42	99	73.276	Stegastes_partitus
ENSCHIG00000014431	DDX42	86	96.292	ENSSSCG00000017289	DDX42	97	96.292	Sus_scrofa
ENSCHIG00000014431	DDX42	100	83.351	ENSTGUG00000001931	DDX42	100	82.770	Taeniopygia_guttata
ENSCHIG00000014431	DDX42	100	72.039	ENSTRUG00000010711	ddx42	99	79.650	Takifugu_rubripes
ENSCHIG00000014431	DDX42	84	93.421	ENSTBEG00000010159	DDX42	99	93.421	Tupaia_belangeri
ENSCHIG00000014431	DDX42	100	97.128	ENSTTRG00000006962	DDX42	100	97.128	Tursiops_truncatus
ENSCHIG00000014431	DDX42	100	96.489	ENSUAMG00000007321	DDX42	100	96.489	Ursus_americanus
ENSCHIG00000014431	DDX42	100	95.426	ENSUMAG00000017438	DDX42	100	95.319	Ursus_maritimus
ENSCHIG00000014431	DDX42	100	86.475	ENSVPAG00000009633	DDX42	100	86.901	Vicugna_pacos
ENSCHIG00000014431	DDX42	100	96.912	ENSVVUG00000006095	DDX42	100	96.912	Vulpes_vulpes
ENSCHIG00000014431	DDX42	100	76.874	ENSXETG00000003245	ddx42	100	75.290	Xenopus_tropicalis
ENSCHIG00000014431	DDX42	85	71.036	ENSXCOG00000017560	ddx42	97	72.855	Xiphophorus_couchianus
ENSCHIG00000014431	DDX42	100	72.086	ENSXMAG00000008138	ddx42	100	73.355	Xiphophorus_maculatus