EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000014743 (Gene tree)
Gene ID: 102191061
Gene Symbol: POLR3F
Alias: RPC39|RPC6
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 11663 bases
Position: chr13:37926669-37938331
Accession: 102191061
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000013261	RNA_pol_Rpc34	PF05158.12	1.1e-105	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000021053	POLR3F-201	951	XM_005688075	ENSCHIP00000013261	316 (aa)	XP_005688132	UPI0000615346

Gene Model

Click here to download ENSCHIG00000014743's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03020	RNA polymerase	KEGG
chx04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000014743's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000014743	POLR3F	100	99.367	ENSG00000132664	POLR3F	100	99.367	Homo_sapiens
ENSCHIG00000014743	POLR3F	100	85.127	ENSAPOG00000008271	polr3f	100	85.127	Acanthochromis_polyacanthus
ENSCHIG00000014743	POLR3F	100	99.684	ENSAMEG00000005222	POLR3F	100	99.684	Ailuropoda_melanoleuca
ENSCHIG00000014743	POLR3F	100	80.063	ENSACIG00000006705	polr3f	100	80.063	Amphilophus_citrinellus
ENSCHIG00000014743	POLR3F	100	85.759	ENSAOCG00000000687	polr3f	100	85.759	Amphiprion_ocellaris
ENSCHIG00000014743	POLR3F	100	85.443	ENSAPEG00000015263	polr3f	100	85.443	Amphiprion_percula
ENSCHIG00000014743	POLR3F	87	88.727	ENSATEG00000015539	polr3f	100	88.727	Anabas_testudineus
ENSCHIG00000014743	POLR3F	87	95.273	ENSAPLG00000005533	POLR3F	100	95.273	Anas_platyrhynchos
ENSCHIG00000014743	POLR3F	96	93.069	ENSACAG00000014293	POLR3F	98	93.069	Anolis_carolinensis
ENSCHIG00000014743	POLR3F	100	99.051	ENSANAG00000026726	POLR3F	100	99.051	Aotus_nancymaae
ENSCHIG00000014743	POLR3F	100	86.392	ENSACLG00000003615	polr3f	100	86.392	Astatotilapia_calliptera
ENSCHIG00000014743	POLR3F	100	87.025	ENSAMXG00000036020	polr3f	100	87.025	Astyanax_mexicanus
ENSCHIG00000014743	POLR3F	100	100.000	ENSBTAG00000008825	POLR3F	100	100.000	Bos_taurus
ENSCHIG00000014743	POLR3F	94	33.445	WBGene00021112	W09C3.4	95	33.445	Caenorhabditis_elegans
ENSCHIG00000014743	POLR3F	100	99.051	ENSCJAG00000005159	POLR3F	100	99.051	Callithrix_jacchus
ENSCHIG00000014743	POLR3F	100	99.367	ENSCAFG00000005420	POLR3F	100	99.367	Canis_familiaris
ENSCHIG00000014743	POLR3F	100	99.367	ENSCAFG00020027500	POLR3F	100	99.367	Canis_lupus_dingo
ENSCHIG00000014743	POLR3F	100	99.684	ENSTSYG00000004207	POLR3F	100	99.684	Carlito_syrichta
ENSCHIG00000014743	POLR3F	93	56.419	ENSCAPG00000008423	POLR3F	100	56.419	Cavia_aperea
ENSCHIG00000014743	POLR3F	100	98.418	ENSCPOG00000002400	POLR3F	100	98.418	Cavia_porcellus
ENSCHIG00000014743	POLR3F	100	88.291	ENSCCAG00000021800	POLR3F	100	88.291	Cebus_capucinus
ENSCHIG00000014743	POLR3F	100	99.684	ENSCATG00000019507	POLR3F	100	99.684	Cercocebus_atys
ENSCHIG00000014743	POLR3F	100	99.051	ENSCLAG00000016296	POLR3F	100	99.051	Chinchilla_lanigera
ENSCHIG00000014743	POLR3F	100	99.684	ENSCSAG00000011513	POLR3F	100	99.684	Chlorocebus_sabaeus
ENSCHIG00000014743	POLR3F	73	98.601	ENSCHOG00000013268	POLR3F	73	98.601	Choloepus_hoffmanni
ENSCHIG00000014743	POLR3F	87	94.545	ENSCPBG00000023473	POLR3F	100	94.545	Chrysemys_picta_bellii
ENSCHIG00000014743	POLR3F	99	60.952	ENSCING00000001212	-	99	60.952	Ciona_intestinalis
ENSCHIG00000014743	POLR3F	70	59.193	ENSCSAVG00000003340	-	96	66.272	Ciona_savignyi
ENSCHIG00000014743	POLR3F	92	99.656	ENSCANG00000037390	POLR3F	100	99.656	Colobus_angolensis_palliatus
ENSCHIG00000014743	POLR3F	100	98.734	ENSCGRG00001002032	Polr3f	100	98.734	Cricetulus_griseus_chok1gshd
ENSCHIG00000014743	POLR3F	100	98.734	ENSCGRG00000010852	Polr3f	100	98.734	Cricetulus_griseus_crigri
ENSCHIG00000014743	POLR3F	100	84.177	ENSCSEG00000001247	polr3f	100	84.177	Cynoglossus_semilaevis
ENSCHIG00000014743	POLR3F	100	85.127	ENSCVAG00000007611	polr3f	100	85.127	Cyprinodon_variegatus
ENSCHIG00000014743	POLR3F	100	87.975	ENSDARG00000012572	polr3f	100	87.975	Danio_rerio
ENSCHIG00000014743	POLR3F	100	96.519	ENSDNOG00000010719	POLR3F	100	96.519	Dasypus_novemcinctus
ENSCHIG00000014743	POLR3F	100	98.734	ENSDORG00000016352	Polr3f	100	98.734	Dipodomys_ordii
ENSCHIG00000014743	POLR3F	95	49.333	FBgn0038951	CG5380	99	49.333	Drosophila_melanogaster
ENSCHIG00000014743	POLR3F	89	61.210	ENSETEG00000015485	-	100	61.210	Echinops_telfairi
ENSCHIG00000014743	POLR3F	96	77.228	ENSEBUG00000006783	polr3f	97	77.228	Eptatretus_burgeri
ENSCHIG00000014743	POLR3F	100	99.367	ENSEASG00005002022	POLR3F	100	99.367	Equus_asinus_asinus
ENSCHIG00000014743	POLR3F	100	99.367	ENSECAG00000009920	POLR3F	100	99.367	Equus_caballus
ENSCHIG00000014743	POLR3F	80	92.000	ENSEEUG00000000184	POLR3F	80	92.000	Erinaceus_europaeus
ENSCHIG00000014743	POLR3F	100	88.608	ENSELUG00000001558	polr3f	100	88.608	Esox_lucius
ENSCHIG00000014743	POLR3F	100	99.684	ENSFCAG00000013828	POLR3F	100	99.684	Felis_catus
ENSCHIG00000014743	POLR3F	87	95.636	ENSFALG00000007623	POLR3F	100	95.636	Ficedula_albicollis
ENSCHIG00000014743	POLR3F	100	98.734	ENSFDAG00000002528	POLR3F	100	98.734	Fukomys_damarensis
ENSCHIG00000014743	POLR3F	100	82.595	ENSFHEG00000006450	polr3f	100	82.595	Fundulus_heteroclitus
ENSCHIG00000014743	POLR3F	100	93.987	ENSGALG00000008749	POLR3F	100	93.987	Gallus_gallus
ENSCHIG00000014743	POLR3F	100	84.177	ENSGAFG00000003698	polr3f	100	84.177	Gambusia_affinis
ENSCHIG00000014743	POLR3F	100	93.354	ENSGAGG00000006151	POLR3F	100	93.354	Gopherus_agassizii
ENSCHIG00000014743	POLR3F	100	99.367	ENSGGOG00000011543	POLR3F	100	99.367	Gorilla_gorilla
ENSCHIG00000014743	POLR3F	100	86.709	ENSHBUG00000013806	polr3f	100	86.709	Haplochromis_burtoni
ENSCHIG00000014743	POLR3F	100	98.418	ENSHGLG00000011867	POLR3F	100	98.418	Heterocephalus_glaber_female
ENSCHIG00000014743	POLR3F	100	98.418	ENSHGLG00100012577	POLR3F	100	98.418	Heterocephalus_glaber_male
ENSCHIG00000014743	POLR3F	100	76.899	ENSHCOG00000011751	polr3f	100	76.899	Hippocampus_comes
ENSCHIG00000014743	POLR3F	98	87.138	ENSIPUG00000013347	polr3f	99	87.138	Ictalurus_punctatus
ENSCHIG00000014743	POLR3F	100	99.684	ENSSTOG00000013588	POLR3F	100	99.684	Ictidomys_tridecemlineatus
ENSCHIG00000014743	POLR3F	100	99.051	ENSJJAG00000017513	Polr3f	100	99.051	Jaculus_jaculus
ENSCHIG00000014743	POLR3F	87	81.091	ENSKMAG00000016495	polr3f	100	81.091	Kryptolebias_marmoratus
ENSCHIG00000014743	POLR3F	73	91.379	ENSLBEG00000011998	polr3f	100	91.379	Labrus_bergylta
ENSCHIG00000014743	POLR3F	100	89.873	ENSLACG00000009371	POLR3F	100	89.873	Latimeria_chalumnae
ENSCHIG00000014743	POLR3F	100	89.557	ENSLOCG00000015701	polr3f	100	89.557	Lepisosteus_oculatus
ENSCHIG00000014743	POLR3F	100	99.684	ENSLAFG00000004929	POLR3F	100	99.684	Loxodonta_africana
ENSCHIG00000014743	POLR3F	100	99.684	ENSMFAG00000002227	POLR3F	100	99.684	Macaca_fascicularis
ENSCHIG00000014743	POLR3F	87	99.636	ENSMMUG00000004143	POLR3F	100	99.636	Macaca_mulatta
ENSCHIG00000014743	POLR3F	100	99.684	ENSMNEG00000033404	POLR3F	100	99.684	Macaca_nemestrina
ENSCHIG00000014743	POLR3F	100	99.684	ENSMLEG00000021905	POLR3F	100	99.684	Mandrillus_leucophaeus
ENSCHIG00000014743	POLR3F	100	85.759	ENSMAMG00000017975	polr3f	100	85.759	Mastacembelus_armatus
ENSCHIG00000014743	POLR3F	100	86.709	ENSMZEG00005015134	polr3f	100	86.709	Maylandia_zebra
ENSCHIG00000014743	POLR3F	100	93.671	ENSMGAG00000006691	POLR3F	100	93.671	Meleagris_gallopavo
ENSCHIG00000014743	POLR3F	100	99.051	ENSMAUG00000020176	Polr3f	100	99.051	Mesocricetus_auratus
ENSCHIG00000014743	POLR3F	100	99.051	ENSMICG00000044519	POLR3F	100	99.051	Microcebus_murinus
ENSCHIG00000014743	POLR3F	100	98.734	ENSMOCG00000018352	Polr3f	100	98.734	Microtus_ochrogaster
ENSCHIG00000014743	POLR3F	93	87.542	ENSMMOG00000018477	polr3f	100	87.542	Mola_mola
ENSCHIG00000014743	POLR3F	100	98.101	ENSMODG00000005624	POLR3F	100	98.101	Monodelphis_domestica
ENSCHIG00000014743	POLR3F	100	86.709	ENSMALG00000006685	polr3f	100	86.709	Monopterus_albus
ENSCHIG00000014743	POLR3F	100	98.101	MGP_CAROLIEiJ_G0024385	Polr3f	100	98.101	Mus_caroli
ENSCHIG00000014743	POLR3F	100	98.101	ENSMUSG00000027427	Polr3f	100	98.101	Mus_musculus
ENSCHIG00000014743	POLR3F	100	98.101	MGP_PahariEiJ_G0025829	Polr3f	100	98.101	Mus_pahari
ENSCHIG00000014743	POLR3F	100	98.101	MGP_SPRETEiJ_G0025304	Polr3f	100	98.101	Mus_spretus
ENSCHIG00000014743	POLR3F	100	77.231	ENSMPUG00000001252	-	100	77.231	Mustela_putorius_furo
ENSCHIG00000014743	POLR3F	100	99.367	ENSMLUG00000014844	POLR3F	100	99.367	Myotis_lucifugus
ENSCHIG00000014743	POLR3F	100	99.051	ENSNGAG00000010898	Polr3f	100	99.051	Nannospalax_galili
ENSCHIG00000014743	POLR3F	100	87.025	ENSNBRG00000020796	polr3f	100	87.025	Neolamprologus_brichardi
ENSCHIG00000014743	POLR3F	100	99.367	ENSNLEG00000009778	POLR3F	100	99.367	Nomascus_leucogenys
ENSCHIG00000014743	POLR3F	93	91.864	ENSMEUG00000010320	POLR3F	100	91.864	Notamacropus_eugenii
ENSCHIG00000014743	POLR3F	100	96.835	ENSOPRG00000003385	POLR3F	100	96.835	Ochotona_princeps
ENSCHIG00000014743	POLR3F	100	98.734	ENSODEG00000011521	POLR3F	100	98.734	Octodon_degus
ENSCHIG00000014743	POLR3F	100	85.443	ENSONIG00000006858	polr3f	100	85.443	Oreochromis_niloticus
ENSCHIG00000014743	POLR3F	100	96.203	ENSOANG00000001253	POLR3F	100	96.203	Ornithorhynchus_anatinus
ENSCHIG00000014743	POLR3F	100	99.367	ENSOCUG00000015067	POLR3F	100	99.367	Oryctolagus_cuniculus
ENSCHIG00000014743	POLR3F	100	84.494	ENSORLG00000022412	polr3f	100	84.494	Oryzias_latipes
ENSCHIG00000014743	POLR3F	100	84.494	ENSORLG00020021944	polr3f	100	84.494	Oryzias_latipes_hni
ENSCHIG00000014743	POLR3F	100	98.101	ENSOGAG00000002916	POLR3F	100	98.101	Otolemur_garnettii
ENSCHIG00000014743	POLR3F	100	100.000	ENSOARG00000000315	-	100	100.000	Ovis_aries
ENSCHIG00000014743	POLR3F	100	63.291	ENSOARG00000008647	-	100	63.291	Ovis_aries
ENSCHIG00000014743	POLR3F	100	99.367	ENSPPAG00000036681	POLR3F	100	99.367	Pan_paniscus
ENSCHIG00000014743	POLR3F	100	99.684	ENSPPRG00000024604	POLR3F	100	99.684	Panthera_pardus
ENSCHIG00000014743	POLR3F	100	99.684	ENSPTIG00000020292	POLR3F	100	99.684	Panthera_tigris_altaica
ENSCHIG00000014743	POLR3F	100	99.367	ENSPTRG00000013287	POLR3F	100	99.367	Pan_troglodytes
ENSCHIG00000014743	POLR3F	100	99.684	ENSPANG00000025015	POLR3F	100	99.684	Papio_anubis
ENSCHIG00000014743	POLR3F	100	87.658	ENSPKIG00000004427	polr3f	100	87.658	Paramormyrops_kingsleyae
ENSCHIG00000014743	POLR3F	87	95.636	ENSPSIG00000016613	POLR3F	100	95.636	Pelodiscus_sinensis
ENSCHIG00000014743	POLR3F	100	52.978	ENSPMGG00000018350	polr3f	100	56.013	Periophthalmus_magnuspinnatus
ENSCHIG00000014743	POLR3F	100	99.051	ENSPEMG00000006966	Polr3f	100	99.051	Peromyscus_maniculatus_bairdii
ENSCHIG00000014743	POLR3F	100	79.747	ENSPMAG00000005530	polr3f	100	79.747	Petromyzon_marinus
ENSCHIG00000014743	POLR3F	100	98.418	ENSPCIG00000000908	POLR3F	85	98.418	Phascolarctos_cinereus
ENSCHIG00000014743	POLR3F	100	84.177	ENSPFOG00000018334	polr3f	100	84.177	Poecilia_formosa
ENSCHIG00000014743	POLR3F	100	84.177	ENSPLAG00000021803	polr3f	100	84.177	Poecilia_latipinna
ENSCHIG00000014743	POLR3F	100	84.177	ENSPMEG00000013150	polr3f	100	84.177	Poecilia_mexicana
ENSCHIG00000014743	POLR3F	100	84.177	ENSPREG00000005278	polr3f	100	84.177	Poecilia_reticulata
ENSCHIG00000014743	POLR3F	100	99.367	ENSPPYG00000010737	POLR3F	100	99.367	Pongo_abelii
ENSCHIG00000014743	POLR3F	66	100.000	ENSPCAG00000004893	POLR3F	71	100.000	Procavia_capensis
ENSCHIG00000014743	POLR3F	100	99.051	ENSPCOG00000004543	POLR3F	100	99.051	Propithecus_coquereli
ENSCHIG00000014743	POLR3F	100	99.367	ENSPVAG00000000403	POLR3F	100	99.367	Pteropus_vampyrus
ENSCHIG00000014743	POLR3F	100	86.709	ENSPNYG00000016276	polr3f	100	86.709	Pundamilia_nyererei
ENSCHIG00000014743	POLR3F	100	87.658	ENSPNAG00000005164	polr3f	100	87.658	Pygocentrus_nattereri
ENSCHIG00000014743	POLR3F	100	98.418	ENSRNOG00000007548	Polr3f	85	98.418	Rattus_norvegicus
ENSCHIG00000014743	POLR3F	100	99.684	ENSRBIG00000021268	POLR3F	100	99.684	Rhinopithecus_bieti
ENSCHIG00000014743	POLR3F	100	99.684	ENSRROG00000039911	POLR3F	100	99.684	Rhinopithecus_roxellana
ENSCHIG00000014743	POLR3F	100	99.051	ENSSBOG00000018207	POLR3F	100	99.051	Saimiri_boliviensis_boliviensis
ENSCHIG00000014743	POLR3F	100	77.603	ENSSHAG00000018160	POLR3F	100	76.656	Sarcophilus_harrisii
ENSCHIG00000014743	POLR3F	100	88.924	ENSSFOG00015022433	polr3f	100	88.924	Scleropages_formosus
ENSCHIG00000014743	POLR3F	100	85.127	ENSSMAG00000021029	polr3f	100	85.127	Scophthalmus_maximus
ENSCHIG00000014743	POLR3F	100	77.215	ENSSDUG00000022435	polr3f	100	77.215	Seriola_dumerili
ENSCHIG00000014743	POLR3F	100	86.392	ENSSLDG00000012761	polr3f	100	86.392	Seriola_lalandi_dorsalis
ENSCHIG00000014743	POLR3F	100	89.557	ENSSARG00000006039	POLR3F	100	89.557	Sorex_araneus
ENSCHIG00000014743	POLR3F	100	93.987	ENSSPUG00000001873	POLR3F	100	93.987	Sphenodon_punctatus
ENSCHIG00000014743	POLR3F	100	78.165	ENSSPAG00000002092	polr3f	100	78.165	Stegastes_partitus
ENSCHIG00000014743	POLR3F	100	99.051	ENSSSCG00000007095	POLR3F	100	99.051	Sus_scrofa
ENSCHIG00000014743	POLR3F	100	93.354	ENSTGUG00000005839	POLR3F	100	93.354	Taeniopygia_guttata
ENSCHIG00000014743	POLR3F	100	84.494	ENSTRUG00000012101	polr3f	100	84.494	Takifugu_rubripes
ENSCHIG00000014743	POLR3F	100	83.228	ENSTNIG00000006456	polr3f	100	83.228	Tetraodon_nigroviridis
ENSCHIG00000014743	POLR3F	100	83.228	ENSTBEG00000007921	POLR3F	100	83.228	Tupaia_belangeri
ENSCHIG00000014743	POLR3F	100	99.367	ENSTTRG00000002580	POLR3F	100	99.367	Tursiops_truncatus
ENSCHIG00000014743	POLR3F	53	98.795	ENSUAMG00000024166	POLR3F	100	98.795	Ursus_americanus
ENSCHIG00000014743	POLR3F	100	99.367	ENSUMAG00000024944	POLR3F	100	99.367	Ursus_maritimus
ENSCHIG00000014743	POLR3F	100	98.734	ENSVPAG00000009063	POLR3F	100	98.734	Vicugna_pacos
ENSCHIG00000014743	POLR3F	100	99.367	ENSVVUG00000012925	POLR3F	100	99.367	Vulpes_vulpes
ENSCHIG00000014743	POLR3F	100	89.241	ENSXETG00000024898	polr3f	100	89.241	Xenopus_tropicalis
ENSCHIG00000014743	POLR3F	87	86.545	ENSXCOG00000010301	polr3f	100	86.545	Xiphophorus_couchianus
ENSCHIG00000014743	POLR3F	100	84.494	ENSXMAG00000004604	polr3f	100	84.494	Xiphophorus_maculatus