EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000014969 (Gene tree)
Gene ID: 102173071
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 30495 bases
Position: chr29:40168300-40198794
Accession: 102173071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000013716	CPSF_A	PF03178.15	5.2e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000021508	DDB1-201	8365	XM_005699742	ENSCHIP00000013716	1140 (aa)	XP_005699799	UPI0000EA2339

Gene Model

Click here to download ENSCHIG00000014969's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03420	Nucleotide excision repair	KEGG
chx04120	Ubiquitin mediated proteolysis	KEGG
chx05161	Hepatitis B	KEGG
chx05170	Human immunodeficiency virus 1 infection	KEGG
chx05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000014969's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000014969	DDB1	100	99.737	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSCHIG00000014969	DDB1	98	91.375	ENSAPOG00000005036	ddb1	99	91.429	Acanthochromis_polyacanthus
ENSCHIG00000014969	DDB1	100	99.825	ENSAMEG00000016518	DDB1	100	99.825	Ailuropoda_melanoleuca
ENSCHIG00000014969	DDB1	86	91.735	ENSACIG00000020624	ddb1	99	91.735	Amphilophus_citrinellus
ENSCHIG00000014969	DDB1	100	91.053	ENSAOCG00000003066	ddb1	100	91.053	Amphiprion_ocellaris
ENSCHIG00000014969	DDB1	100	91.140	ENSAPEG00000000092	ddb1	100	91.140	Amphiprion_percula
ENSCHIG00000014969	DDB1	94	91.628	ENSATEG00000020571	ddb1	97	91.628	Anabas_testudineus
ENSCHIG00000014969	DDB1	98	96.533	ENSAPLG00000007174	DDB1	99	96.533	Anas_platyrhynchos
ENSCHIG00000014969	DDB1	100	97.018	ENSACAG00000017758	DDB1	100	97.018	Anolis_carolinensis
ENSCHIG00000014969	DDB1	100	99.737	ENSANAG00000021878	DDB1	100	99.737	Aotus_nancymaae
ENSCHIG00000014969	DDB1	100	91.404	ENSACLG00000012401	ddb1	100	91.404	Astatotilapia_calliptera
ENSCHIG00000014969	DDB1	100	100.000	ENSBTAG00000021569	DDB1	93	100.000	Bos_taurus
ENSCHIG00000014969	DDB1	100	37.297	WBGene00010890	ddb-1	100	37.211	Caenorhabditis_elegans
ENSCHIG00000014969	DDB1	100	99.737	ENSCJAG00000019319	DDB1	100	99.737	Callithrix_jacchus
ENSCHIG00000014969	DDB1	100	99.825	ENSCAFG00000016264	DDB1	100	99.825	Canis_familiaris
ENSCHIG00000014969	DDB1	94	99.535	ENSCAFG00020012722	DDB1	99	99.535	Canis_lupus_dingo
ENSCHIG00000014969	DDB1	100	99.035	ENSTSYG00000008027	DDB1	100	99.035	Carlito_syrichta
ENSCHIG00000014969	DDB1	98	99.017	ENSCAPG00000010786	DDB1	100	99.017	Cavia_aperea
ENSCHIG00000014969	DDB1	100	99.035	ENSCPOG00000009956	DDB1	100	99.035	Cavia_porcellus
ENSCHIG00000014969	DDB1	100	99.737	ENSCCAG00000035883	DDB1	100	99.737	Cebus_capucinus
ENSCHIG00000014969	DDB1	100	97.222	ENSCATG00000044495	DDB1	100	97.222	Cercocebus_atys
ENSCHIG00000014969	DDB1	100	99.123	ENSCLAG00000004126	DDB1	100	99.123	Chinchilla_lanigera
ENSCHIG00000014969	DDB1	100	99.737	ENSCSAG00000006392	DDB1	100	99.737	Chlorocebus_sabaeus
ENSCHIG00000014969	DDB1	88	92.803	ENSCHOG00000011377	DDB1	90	92.803	Choloepus_hoffmanni
ENSCHIG00000014969	DDB1	100	97.719	ENSCPBG00000017728	DDB1	100	97.719	Chrysemys_picta_bellii
ENSCHIG00000014969	DDB1	100	61.892	ENSCING00000007437	-	100	61.806	Ciona_intestinalis
ENSCHIG00000014969	DDB1	94	60.184	ENSCSAVG00000004783	-	100	60.184	Ciona_savignyi
ENSCHIG00000014969	DDB1	100	99.737	ENSCANG00000019948	DDB1	100	99.737	Colobus_angolensis_palliatus
ENSCHIG00000014969	DDB1	100	99.737	ENSCGRG00001016599	Ddb1	100	99.737	Cricetulus_griseus_chok1gshd
ENSCHIG00000014969	DDB1	100	99.737	ENSCGRG00000013427	Ddb1	100	99.737	Cricetulus_griseus_crigri
ENSCHIG00000014969	DDB1	93	91.140	ENSCSEG00000012499	ddb1	99	89.575	Cynoglossus_semilaevis
ENSCHIG00000014969	DDB1	94	91.333	ENSCVAG00000019531	ddb1	99	91.333	Cyprinodon_variegatus
ENSCHIG00000014969	DDB1	100	88.266	ENSDARG00000074431	ddb1	100	88.384	Danio_rerio
ENSCHIG00000014969	DDB1	94	99.163	ENSDNOG00000014884	DDB1	97	99.163	Dasypus_novemcinctus
ENSCHIG00000014969	DDB1	84	100.000	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
ENSCHIG00000014969	DDB1	100	60.961	FBgn0260962	pic	100	60.752	Drosophila_melanogaster
ENSCHIG00000014969	DDB1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
ENSCHIG00000014969	DDB1	78	84.927	ENSEBUG00000014593	ddb1	97	84.927	Eptatretus_burgeri
ENSCHIG00000014969	DDB1	100	99.649	ENSEASG00005008184	DDB1	100	99.649	Equus_asinus_asinus
ENSCHIG00000014969	DDB1	100	99.561	ENSECAG00000012136	DDB1	100	99.561	Equus_caballus
ENSCHIG00000014969	DDB1	85	97.306	ENSEEUG00000003194	DDB1	85	97.306	Erinaceus_europaeus
ENSCHIG00000014969	DDB1	100	91.140	ENSELUG00000023868	ddb1	100	91.140	Esox_lucius
ENSCHIG00000014969	DDB1	100	99.825	ENSFCAG00000029716	DDB1	100	99.825	Felis_catus
ENSCHIG00000014969	DDB1	100	96.938	ENSFALG00000011981	DDB1	100	96.938	Ficedula_albicollis
ENSCHIG00000014969	DDB1	100	99.035	ENSFDAG00000005128	DDB1	100	99.035	Fukomys_damarensis
ENSCHIG00000014969	DDB1	90	90.588	ENSFHEG00000022133	ddb1	98	90.588	Fundulus_heteroclitus
ENSCHIG00000014969	DDB1	79	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSCHIG00000014969	DDB1	100	97.105	ENSGALG00000042333	DDB1	100	97.105	Gallus_gallus
ENSCHIG00000014969	DDB1	94	91.146	ENSGAFG00000013142	ddb1	99	91.146	Gambusia_affinis
ENSCHIG00000014969	DDB1	96	90.559	ENSGACG00000017182	ddb1	100	90.559	Gasterosteus_aculeatus
ENSCHIG00000014969	DDB1	95	97.786	ENSGAGG00000014124	DDB1	100	97.786	Gopherus_agassizii
ENSCHIG00000014969	DDB1	100	99.737	ENSGGOG00000004052	DDB1	100	99.737	Gorilla_gorilla
ENSCHIG00000014969	DDB1	100	91.404	ENSHBUG00000008873	ddb1	100	91.404	Haplochromis_burtoni
ENSCHIG00000014969	DDB1	100	98.947	ENSHGLG00000018430	DDB1	100	98.947	Heterocephalus_glaber_female
ENSCHIG00000014969	DDB1	100	97.895	ENSHGLG00100014475	DDB1	100	97.895	Heterocephalus_glaber_male
ENSCHIG00000014969	DDB1	94	90.892	ENSHCOG00000018670	ddb1	98	90.892	Hippocampus_comes
ENSCHIG00000014969	DDB1	100	90.439	ENSIPUG00000005612	DDB1	100	90.439	Ictalurus_punctatus
ENSCHIG00000014969	DDB1	100	99.737	ENSSTOG00000007552	DDB1	100	99.737	Ictidomys_tridecemlineatus
ENSCHIG00000014969	DDB1	100	99.737	ENSJJAG00000017769	Ddb1	100	99.737	Jaculus_jaculus
ENSCHIG00000014969	DDB1	94	91.240	ENSKMAG00000002315	ddb1	99	91.240	Kryptolebias_marmoratus
ENSCHIG00000014969	DDB1	85	91.399	ENSLBEG00000017065	ddb1	99	91.399	Labrus_bergylta
ENSCHIG00000014969	DDB1	100	93.520	ENSLACG00000017611	DDB1	100	93.520	Latimeria_chalumnae
ENSCHIG00000014969	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSCHIG00000014969	DDB1	100	99.561	ENSLAFG00000011513	DDB1	100	99.561	Loxodonta_africana
ENSCHIG00000014969	DDB1	100	99.737	ENSMFAG00000042035	DDB1	100	99.737	Macaca_fascicularis
ENSCHIG00000014969	DDB1	99	99.735	ENSMMUG00000002691	DDB1	99	99.735	Macaca_mulatta
ENSCHIG00000014969	DDB1	100	99.737	ENSMNEG00000031559	DDB1	100	99.737	Macaca_nemestrina
ENSCHIG00000014969	DDB1	100	99.737	ENSMLEG00000044136	DDB1	100	99.737	Mandrillus_leucophaeus
ENSCHIG00000014969	DDB1	100	91.404	ENSMAMG00000014372	ddb1	100	91.404	Mastacembelus_armatus
ENSCHIG00000014969	DDB1	100	91.316	ENSMZEG00005013835	ddb1	100	91.316	Maylandia_zebra
ENSCHIG00000014969	DDB1	94	96.462	ENSMGAG00000004990	DDB1	100	96.462	Meleagris_gallopavo
ENSCHIG00000014969	DDB1	100	99.737	ENSMAUG00000012926	Ddb1	100	99.737	Mesocricetus_auratus
ENSCHIG00000014969	DDB1	100	99.737	ENSMICG00000013703	DDB1	100	99.737	Microcebus_murinus
ENSCHIG00000014969	DDB1	100	99.474	ENSMOCG00000020499	Ddb1	100	99.474	Microtus_ochrogaster
ENSCHIG00000014969	DDB1	86	91.735	ENSMMOG00000001758	ddb1	99	91.735	Mola_mola
ENSCHIG00000014969	DDB1	100	89.273	ENSMODG00000020353	DDB1	100	89.273	Monodelphis_domestica
ENSCHIG00000014969	DDB1	100	91.404	ENSMALG00000014071	ddb1	100	91.404	Monopterus_albus
ENSCHIG00000014969	DDB1	100	99.649	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.649	Mus_caroli
ENSCHIG00000014969	DDB1	100	99.561	ENSMUSG00000024740	Ddb1	100	99.561	Mus_musculus
ENSCHIG00000014969	DDB1	100	99.649	MGP_PahariEiJ_G0014189	Ddb1	100	99.649	Mus_pahari
ENSCHIG00000014969	DDB1	100	99.649	MGP_SPRETEiJ_G0023609	Ddb1	100	99.649	Mus_spretus
ENSCHIG00000014969	DDB1	100	96.491	ENSMPUG00000014200	DDB1	100	96.491	Mustela_putorius_furo
ENSCHIG00000014969	DDB1	100	99.211	ENSMLUG00000013232	DDB1	100	99.211	Myotis_lucifugus
ENSCHIG00000014969	DDB1	100	99.298	ENSNGAG00000009384	Ddb1	100	99.298	Nannospalax_galili
ENSCHIG00000014969	DDB1	100	91.491	ENSNBRG00000019581	ddb1	100	91.491	Neolamprologus_brichardi
ENSCHIG00000014969	DDB1	100	96.615	ENSNLEG00000002022	DDB1	100	96.615	Nomascus_leucogenys
ENSCHIG00000014969	DDB1	91	99.648	ENSMEUG00000001099	DDB1	93	99.648	Notamacropus_eugenii
ENSCHIG00000014969	DDB1	90	90.883	ENSOPRG00000008254	DDB1	90	90.883	Ochotona_princeps
ENSCHIG00000014969	DDB1	100	98.947	ENSODEG00000002419	DDB1	100	98.947	Octodon_degus
ENSCHIG00000014969	DDB1	100	91.404	ENSONIG00000005804	ddb1	100	91.404	Oreochromis_niloticus
ENSCHIG00000014969	DDB1	91	98.159	ENSOANG00000004897	DDB1	100	98.159	Ornithorhynchus_anatinus
ENSCHIG00000014969	DDB1	100	99.737	ENSOCUG00000001667	DDB1	100	99.737	Oryctolagus_cuniculus
ENSCHIG00000014969	DDB1	96	89.826	ENSORLG00000001399	ddb1	98	91.066	Oryzias_latipes
ENSCHIG00000014969	DDB1	96	89.734	ENSORLG00020001277	ddb1	97	89.734	Oryzias_latipes_hni
ENSCHIG00000014969	DDB1	94	90.884	ENSORLG00015002080	ddb1	99	90.884	Oryzias_latipes_hsok
ENSCHIG00000014969	DDB1	96	89.699	ENSOMEG00000006181	ddb1	99	89.699	Oryzias_melastigma
ENSCHIG00000014969	DDB1	100	99.737	ENSOGAG00000016103	DDB1	100	99.737	Otolemur_garnettii
ENSCHIG00000014969	DDB1	99	100.000	ENSOARG00000011716	DDB1	98	100.000	Ovis_aries
ENSCHIG00000014969	DDB1	100	99.737	ENSPPAG00000035343	DDB1	100	99.737	Pan_paniscus
ENSCHIG00000014969	DDB1	100	99.825	ENSPPRG00000013300	DDB1	100	99.825	Panthera_pardus
ENSCHIG00000014969	DDB1	98	99.821	ENSPTIG00000006909	DDB1	98	99.821	Panthera_tigris_altaica
ENSCHIG00000014969	DDB1	100	99.737	ENSPTRG00000003737	DDB1	100	99.737	Pan_troglodytes
ENSCHIG00000014969	DDB1	100	99.737	ENSPANG00000000242	DDB1	100	99.737	Papio_anubis
ENSCHIG00000014969	DDB1	94	91.240	ENSPKIG00000019213	ddb1	94	91.240	Paramormyrops_kingsleyae
ENSCHIG00000014969	DDB1	98	97.064	ENSPSIG00000013275	DDB1	100	97.064	Pelodiscus_sinensis
ENSCHIG00000014969	DDB1	86	91.429	ENSPMGG00000021179	ddb1	99	91.429	Periophthalmus_magnuspinnatus
ENSCHIG00000014969	DDB1	100	99.737	ENSPEMG00000012241	Ddb1	100	99.737	Peromyscus_maniculatus_bairdii
ENSCHIG00000014969	DDB1	89	86.739	ENSPMAG00000008479	ddb1	100	86.739	Petromyzon_marinus
ENSCHIG00000014969	DDB1	100	99.035	ENSPCIG00000002643	DDB1	100	99.035	Phascolarctos_cinereus
ENSCHIG00000014969	DDB1	100	90.798	ENSPFOG00000002768	ddb1	100	90.798	Poecilia_formosa
ENSCHIG00000014969	DDB1	100	90.614	ENSPLAG00000017227	ddb1	100	90.614	Poecilia_latipinna
ENSCHIG00000014969	DDB1	100	90.614	ENSPMEG00000011398	ddb1	100	90.614	Poecilia_mexicana
ENSCHIG00000014969	DDB1	94	91.256	ENSPREG00000004440	ddb1	98	91.256	Poecilia_reticulata
ENSCHIG00000014969	DDB1	100	94.852	ENSPPYG00000003193	DDB1	100	94.852	Pongo_abelii
ENSCHIG00000014969	DDB1	85	99.254	ENSPCAG00000011040	DDB1	85	99.254	Procavia_capensis
ENSCHIG00000014969	DDB1	100	98.161	ENSPCOG00000015176	DDB1	100	98.161	Propithecus_coquereli
ENSCHIG00000014969	DDB1	100	99.649	ENSPVAG00000003847	DDB1	100	99.649	Pteropus_vampyrus
ENSCHIG00000014969	DDB1	94	91.240	ENSPNAG00000006635	ddb1	97	91.240	Pygocentrus_nattereri
ENSCHIG00000014969	DDB1	100	99.649	ENSRNOG00000020715	Ddb1	100	99.649	Rattus_norvegicus
ENSCHIG00000014969	DDB1	100	99.737	ENSRBIG00000033611	DDB1	100	99.737	Rhinopithecus_bieti
ENSCHIG00000014969	DDB1	100	99.737	ENSRROG00000041407	DDB1	100	99.737	Rhinopithecus_roxellana
ENSCHIG00000014969	DDB1	100	99.649	ENSSBOG00000019775	DDB1	100	99.649	Saimiri_boliviensis_boliviensis
ENSCHIG00000014969	DDB1	94	97.009	ENSSHAG00000011600	DDB1	100	97.009	Sarcophilus_harrisii
ENSCHIG00000014969	DDB1	94	91.357	ENSSFOG00015011151	ddb1	97	91.357	Scleropages_formosus
ENSCHIG00000014969	DDB1	100	90.965	ENSSMAG00000009495	ddb1	100	90.965	Scophthalmus_maximus
ENSCHIG00000014969	DDB1	100	91.316	ENSSDUG00000004642	ddb1	100	91.316	Seriola_dumerili
ENSCHIG00000014969	DDB1	100	91.316	ENSSLDG00000015804	ddb1	100	91.316	Seriola_lalandi_dorsalis
ENSCHIG00000014969	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSCHIG00000014969	DDB1	100	97.895	ENSSPUG00000019338	DDB1	100	97.895	Sphenodon_punctatus
ENSCHIG00000014969	DDB1	94	91.535	ENSSPAG00000009888	ddb1	99	91.535	Stegastes_partitus
ENSCHIG00000014969	DDB1	100	98.860	ENSSSCG00000013094	DDB1	100	98.860	Sus_scrofa
ENSCHIG00000014969	DDB1	100	97.105	ENSTGUG00000006414	DDB1	100	97.105	Taeniopygia_guttata
ENSCHIG00000014969	DDB1	94	90.214	ENSTRUG00000016682	ddb1	98	90.214	Takifugu_rubripes
ENSCHIG00000014969	DDB1	88	84.930	ENSTNIG00000009565	ddb1	99	84.930	Tetraodon_nigroviridis
ENSCHIG00000014969	DDB1	92	95.170	ENSTTRG00000011055	DDB1	94	95.170	Tursiops_truncatus
ENSCHIG00000014969	DDB1	94	99.535	ENSUAMG00000017793	DDB1	93	99.535	Ursus_americanus
ENSCHIG00000014969	DDB1	94	99.535	ENSUMAG00000011788	DDB1	98	99.535	Ursus_maritimus
ENSCHIG00000014969	DDB1	90	100.000	ENSVPAG00000007963	DDB1	92	100.000	Vicugna_pacos
ENSCHIG00000014969	DDB1	100	99.737	ENSVVUG00000004987	DDB1	100	99.737	Vulpes_vulpes
ENSCHIG00000014969	DDB1	100	93.094	ENSXETG00000008820	ddb1	100	93.094	Xenopus_tropicalis
ENSCHIG00000014969	DDB1	86	91.224	ENSXCOG00000013956	ddb1	99	91.224	Xiphophorus_couchianus
ENSCHIG00000014969	DDB1	94	91.146	ENSXMAG00000000022	ddb1	99	91.146	Xiphophorus_maculatus