EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000015027 (Gene tree)
Gene ID: 102181975
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 66336 bases
Position: chr16:45684267-45750602
Accession: 102181975
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000013902	ResIII	PF04851.15	6.7e-08	1	1
ENSCHIP00000013895	ResIII	PF04851.15	6.9e-08	1	1
ENSCHIP00000013880	ResIII	PF04851.15	7.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000021695	CHD5-203	5790	-	ENSCHIP00000013902	1929 (aa)	-	UPI000D18E8D5
ENSCHIT00000021688	CHD5-202	5844	-	ENSCHIP00000013895	1947 (aa)	-	UPI000D18DE52
ENSCHIT00000021673	CHD5-201	5991	XM_018060448	ENSCHIP00000013880	1996 (aa)	XP_017915937	UPI000D197563

Gene Model

Click here to download ENSCHIG00000015027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000015027's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000015027	CHD5	94	70.048	ENSCHIG00000020766	-	96	71.353
ENSCHIG00000015027	CHD5	96	67.111	ENSCHIG00000016737	CHD3	94	67.012

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000015027	CHD5	98	94.145	ENSG00000116254	CHD5	99	94.933	Homo_sapiens
ENSCHIG00000015027	CHD5	97	94.278	ENSAMEG00000009880	CHD5	99	94.783	Ailuropoda_melanoleuca
ENSCHIG00000015027	CHD5	92	77.571	ENSACIG00000012582	chd5	98	76.609	Amphilophus_citrinellus
ENSCHIG00000015027	CHD5	91	78.905	ENSAOCG00000020356	chd5	94	76.382	Amphiprion_ocellaris
ENSCHIG00000015027	CHD5	95	79.202	ENSAPLG00000015475	CHD5	99	80.188	Anas_platyrhynchos
ENSCHIG00000015027	CHD5	96	82.464	ENSACAG00000002441	CHD5	98	82.005	Anolis_carolinensis
ENSCHIG00000015027	CHD5	87	94.083	ENSANAG00000001078	CHD5	91	94.536	Aotus_nancymaae
ENSCHIG00000015027	CHD5	91	74.959	ENSACLG00000003012	chd5	91	80.332	Astatotilapia_calliptera
ENSCHIG00000015027	CHD5	84	85.366	ENSAMXG00000008921	chd5	92	90.698	Astyanax_mexicanus
ENSCHIG00000015027	CHD5	91	97.745	ENSBTAG00000040477	CHD5	99	97.745	Bos_taurus
ENSCHIG00000015027	CHD5	98	94.093	ENSCJAG00000000101	CHD5	99	94.498	Callithrix_jacchus
ENSCHIG00000015027	CHD5	91	95.564	ENSCAFG00000019545	CHD5	99	95.564	Canis_familiaris
ENSCHIG00000015027	CHD5	99	94.088	ENSCAFG00020008689	CHD5	97	95.478	Canis_lupus_dingo
ENSCHIG00000015027	CHD5	97	89.781	ENSTSYG00000033991	CHD5	99	90.591	Carlito_syrichta
ENSCHIG00000015027	CHD5	96	94.087	ENSCAPG00000009294	CHD5	99	94.078	Cavia_aperea
ENSCHIG00000015027	CHD5	96	94.139	ENSCPOG00000025080	CHD5	99	94.130	Cavia_porcellus
ENSCHIG00000015027	CHD5	98	93.886	ENSCCAG00000024756	CHD5	99	94.396	Cebus_capucinus
ENSCHIG00000015027	CHD5	98	93.316	ENSCATG00000043011	CHD5	99	93.887	Cercocebus_atys
ENSCHIG00000015027	CHD5	97	94.136	ENSCLAG00000010589	CHD5	99	94.136	Chinchilla_lanigera
ENSCHIG00000015027	CHD5	98	94.197	ENSCSAG00000000733	CHD5	99	94.753	Chlorocebus_sabaeus
ENSCHIG00000015027	CHD5	91	89.808	ENSCPBG00000019363	CHD5	99	89.699	Chrysemys_picta_bellii
ENSCHIG00000015027	CHD5	97	94.278	ENSCANG00000032302	CHD5	99	94.775	Colobus_angolensis_palliatus
ENSCHIG00000015027	CHD5	53	96.415	ENSCGRG00001011042	Chd5	100	96.415	Cricetulus_griseus_chok1gshd
ENSCHIG00000015027	CHD5	98	92.734	ENSCGRG00000011341	Chd5	99	93.971	Cricetulus_griseus_crigri
ENSCHIG00000015027	CHD5	95	65.177	ENSDARG00000025789	chd4b	87	79.724	Danio_rerio
ENSCHIG00000015027	CHD5	94	76.461	ENSDARG00000105083	chd5	98	78.165	Danio_rerio
ENSCHIG00000015027	CHD5	94	95.455	ENSDNOG00000046342	CHD5	99	90.321	Dasypus_novemcinctus
ENSCHIG00000015027	CHD5	96	93.987	ENSDORG00000005923	Chd5	99	93.977	Dipodomys_ordii
ENSCHIG00000015027	CHD5	99	93.050	ENSEASG00005021464	CHD5	99	93.503	Equus_asinus_asinus
ENSCHIG00000015027	CHD5	100	92.475	ENSECAG00000025043	CHD5	99	98.354	Equus_caballus
ENSCHIG00000015027	CHD5	74	100.000	ENSEEUG00000002772	CHD5	75	100.000	Erinaceus_europaeus
ENSCHIG00000015027	CHD5	93	75.412	ENSELUG00000010742	chd5	90	91.667	Esox_lucius
ENSCHIG00000015027	CHD5	98	94.819	ENSFCAG00000006319	CHD5	99	95.211	Felis_catus
ENSCHIG00000015027	CHD5	96	87.777	ENSFALG00000009740	CHD5	99	87.700	Ficedula_albicollis
ENSCHIG00000015027	CHD5	98	93.201	ENSFDAG00000012881	CHD5	95	94.472	Fukomys_damarensis
ENSCHIG00000015027	CHD5	97	87.187	ENSGALG00000000747	CHD5	99	86.728	Gallus_gallus
ENSCHIG00000015027	CHD5	54	82.857	ENSGACG00000004389	chd5	98	80.366	Gasterosteus_aculeatus
ENSCHIG00000015027	CHD5	89	95.652	ENSGAGG00000001590	CHD5	99	95.652	Gopherus_agassizii
ENSCHIG00000015027	CHD5	97	94.220	ENSGGOG00000000708	CHD5	99	95.010	Gorilla_gorilla
ENSCHIG00000015027	CHD5	91	76.499	ENSHBUG00000013453	chd5	91	86.614	Haplochromis_burtoni
ENSCHIG00000015027	CHD5	100	92.782	ENSHGLG00000018184	CHD5	99	94.436	Heterocephalus_glaber_female
ENSCHIG00000015027	CHD5	99	86.941	ENSHGLG00100013261	CHD5	99	86.831	Heterocephalus_glaber_male
ENSCHIG00000015027	CHD5	91	78.470	ENSIPUG00000005446	chd5	98	76.948	Ictalurus_punctatus
ENSCHIG00000015027	CHD5	98	93.406	ENSSTOG00000002778	CHD5	98	95.072	Ictidomys_tridecemlineatus
ENSCHIG00000015027	CHD5	99	93.213	ENSJJAG00000019072	Chd5	99	94.208	Jaculus_jaculus
ENSCHIG00000015027	CHD5	95	80.793	ENSLOCG00000004944	chd5	97	79.908	Lepisosteus_oculatus
ENSCHIG00000015027	CHD5	97	94.538	ENSLAFG00000006348	CHD5	99	94.987	Loxodonta_africana
ENSCHIG00000015027	CHD5	97	94.071	ENSMFAG00000033993	CHD5	99	94.852	Macaca_fascicularis
ENSCHIG00000015027	CHD5	98	93.261	ENSMMUG00000016838	CHD5	99	94.479	Macaca_mulatta
ENSCHIG00000015027	CHD5	98	94.249	ENSMNEG00000040044	CHD5	99	94.804	Macaca_nemestrina
ENSCHIG00000015027	CHD5	97	91.384	ENSMLEG00000039166	CHD5	99	91.373	Mandrillus_leucophaeus
ENSCHIG00000015027	CHD5	91	74.541	ENSMZEG00005000841	chd5	91	79.348	Maylandia_zebra
ENSCHIG00000015027	CHD5	97	87.059	ENSMGAG00000001055	CHD5	99	86.957	Meleagris_gallopavo
ENSCHIG00000015027	CHD5	98	92.469	ENSMICG00000017862	CHD5	98	97.902	Microcebus_murinus
ENSCHIG00000015027	CHD5	99	92.367	ENSMOCG00000011049	Chd5	99	93.808	Microtus_ochrogaster
ENSCHIG00000015027	CHD5	89	81.056	ENSMODG00000006294	CHD5	81	93.649	Monodelphis_domestica
ENSCHIG00000015027	CHD5	92	77.299	ENSMALG00000002831	chd5	99	76.505	Monopterus_albus
ENSCHIG00000015027	CHD5	97	94.054	MGP_CAROLIEiJ_G0026857	Chd5	99	94.054	Mus_caroli
ENSCHIG00000015027	CHD5	97	93.552	ENSMUSG00000005045	Chd5	99	93.552	Mus_musculus
ENSCHIG00000015027	CHD5	99	92.153	MGP_PahariEiJ_G0029205	Chd5	99	93.852	Mus_pahari
ENSCHIG00000015027	CHD5	97	93.849	MGP_SPRETEiJ_G0027850	Chd5	99	93.849	Mus_spretus
ENSCHIG00000015027	CHD5	95	97.552	ENSMPUG00000007122	CHD5	95	97.552	Mustela_putorius_furo
ENSCHIG00000015027	CHD5	98	93.139	ENSNGAG00000019812	Chd5	96	93.634	Nannospalax_galili
ENSCHIG00000015027	CHD5	97	91.754	ENSNLEG00000010320	CHD5	99	92.188	Nomascus_leucogenys
ENSCHIG00000015027	CHD5	85	90.875	ENSOPRG00000004304	CHD5	87	90.698	Ochotona_princeps
ENSCHIG00000015027	CHD5	98	93.170	ENSODEG00000010262	CHD5	99	94.283	Octodon_degus
ENSCHIG00000015027	CHD5	92	77.058	ENSONIG00000000619	chd5	87	91.163	Oreochromis_niloticus
ENSCHIG00000015027	CHD5	94	71.532	ENSOANG00000001819	CHD5	94	91.822	Ornithorhynchus_anatinus
ENSCHIG00000015027	CHD5	98	92.387	ENSOGAG00000005703	CHD5	100	93.255	Otolemur_garnettii
ENSCHIG00000015027	CHD5	98	94.802	ENSOARG00000013425	CHD5	98	96.727	Ovis_aries
ENSCHIG00000015027	CHD5	97	94.118	ENSPPAG00000034048	CHD5	99	94.909	Pan_paniscus
ENSCHIG00000015027	CHD5	98	94.197	ENSPPRG00000009453	CHD5	99	94.600	Panthera_pardus
ENSCHIG00000015027	CHD5	96	88.320	ENSPTIG00000013926	CHD5	99	88.096	Panthera_tigris_altaica
ENSCHIG00000015027	CHD5	98	94.096	ENSPTRG00000000075	CHD5	99	94.885	Pan_troglodytes
ENSCHIG00000015027	CHD5	98	94.301	ENSPANG00000006765	CHD5	99	94.804	Papio_anubis
ENSCHIG00000015027	CHD5	96	76.697	ENSPKIG00000004282	chd5	95	86.611	Paramormyrops_kingsleyae
ENSCHIG00000015027	CHD5	93	82.306	ENSPSIG00000006414	CHD5	100	82.611	Pelodiscus_sinensis
ENSCHIG00000015027	CHD5	67	95.577	ENSPEMG00000014799	Chd5	99	95.492	Peromyscus_maniculatus_bairdii
ENSCHIG00000015027	CHD5	97	90.787	ENSPCIG00000028310	CHD5	99	89.506	Phascolarctos_cinereus
ENSCHIG00000015027	CHD5	91	75.925	ENSPLAG00000005343	chd5	99	73.605	Poecilia_latipinna
ENSCHIG00000015027	CHD5	94	95.789	ENSPPYG00000001952	CHD5	98	95.789	Pongo_abelii
ENSCHIG00000015027	CHD5	98	94.663	ENSPCOG00000022930	CHD5	99	95.548	Propithecus_coquereli
ENSCHIG00000015027	CHD5	91	78.870	ENSPNYG00000003183	chd5	99	76.858	Pundamilia_nyererei
ENSCHIG00000015027	CHD5	97	94.259	ENSRNOG00000011268	Chd5	99	94.160	Rattus_norvegicus
ENSCHIG00000015027	CHD5	97	91.606	ENSRBIG00000032140	CHD5	98	93.557	Rhinopithecus_bieti
ENSCHIG00000015027	CHD5	97	94.062	ENSRROG00000041146	CHD5	98	94.620	Rhinopithecus_roxellana
ENSCHIG00000015027	CHD5	98	88.768	ENSSBOG00000001955	CHD5	99	94.510	Saimiri_boliviensis_boliviensis
ENSCHIG00000015027	CHD5	94	85.503	ENSSHAG00000018641	CHD5	100	85.451	Sarcophilus_harrisii
ENSCHIG00000015027	CHD5	88	88.841	ENSSFOG00015006296	chd5	90	92.558	Scleropages_formosus
ENSCHIG00000015027	CHD5	92	78.672	ENSSDUG00000017526	chd5	92	91.244	Seriola_dumerili
ENSCHIG00000015027	CHD5	94	81.538	ENSSPUG00000010622	CHD5	98	80.618	Sphenodon_punctatus
ENSCHIG00000015027	CHD5	99	94.402	ENSSSCG00000003366	CHD5	99	96.002	Sus_scrofa
ENSCHIG00000015027	CHD5	93	81.307	ENSTGUG00000002634	-	100	83.226	Taeniopygia_guttata
ENSCHIG00000015027	CHD5	51	80.724	ENSTNIG00000004346	chd5	99	80.747	Tetraodon_nigroviridis
ENSCHIG00000015027	CHD5	98	92.583	ENSTTRG00000010468	CHD5	99	93.747	Tursiops_truncatus
ENSCHIG00000015027	CHD5	97	94.427	ENSUAMG00000024509	CHD5	98	95.985	Ursus_americanus
ENSCHIG00000015027	CHD5	95	91.339	ENSUMAG00000024173	CHD5	98	93.580	Ursus_maritimus
ENSCHIG00000015027	CHD5	98	93.391	ENSVVUG00000026480	CHD5	99	93.534	Vulpes_vulpes
ENSCHIG00000015027	CHD5	94	79.267	ENSXETG00000002904	chd5	100	78.505	Xenopus_tropicalis
ENSCHIG00000015027	CHD5	57	83.871	ENSXCOG00000014202	chd5	99	83.871	Xiphophorus_couchianus