EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000015216 (Gene tree)
Gene ID: 100860992
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 14196 bases
Position: chr23:2579763-2593958
Accession: 100860992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000014016	zf-U11-48K	PF05253.12	5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000021809	SNRNP48-201	1121	XM_018038787	ENSCHIP00000014016	340 (aa)	XP_017894276	UPI00084765F3

Gene Model

Click here to download ENSCHIG00000015216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000015216's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000015216	SNRNP48	100	87.941	ENSG00000168566	SNRNP48	100	87.647	Homo_sapiens
ENSCHIG00000015216	SNRNP48	81	47.552	ENSAPOG00000021430	snrnp48	91	43.452	Acanthochromis_polyacanthus
ENSCHIG00000015216	SNRNP48	99	86.782	ENSAMEG00000017349	SNRNP48	100	86.207	Ailuropoda_melanoleuca
ENSCHIG00000015216	SNRNP48	83	46.367	ENSACIG00000002032	snrnp48	96	41.739	Amphilophus_citrinellus
ENSCHIG00000015216	SNRNP48	81	46.853	ENSAOCG00000010562	snrnp48	96	43.020	Amphiprion_ocellaris
ENSCHIG00000015216	SNRNP48	81	46.479	ENSAPEG00000003231	snrnp48	96	42.693	Amphiprion_percula
ENSCHIG00000015216	SNRNP48	82	49.655	ENSATEG00000020210	snrnp48	80	48.929	Anabas_testudineus
ENSCHIG00000015216	SNRNP48	86	61.639	ENSACAG00000002811	SNRNP48	89	64.483	Anolis_carolinensis
ENSCHIG00000015216	SNRNP48	100	87.059	ENSANAG00000033538	SNRNP48	100	87.353	Aotus_nancymaae
ENSCHIG00000015216	SNRNP48	91	46.855	ENSAMXG00000015309	snrnp48	93	45.152	Astyanax_mexicanus
ENSCHIG00000015216	SNRNP48	100	97.353	ENSBTAG00000001123	SNRNP48	100	97.353	Bos_taurus
ENSCHIG00000015216	SNRNP48	100	87.941	ENSCJAG00000021330	SNRNP48	100	87.647	Callithrix_jacchus
ENSCHIG00000015216	SNRNP48	99	89.318	ENSCAFG00000009574	SNRNP48	83	88.166	Canis_familiaris
ENSCHIG00000015216	SNRNP48	99	89.053	ENSCAFG00020013203	SNRNP48	99	88.166	Canis_lupus_dingo
ENSCHIG00000015216	SNRNP48	100	87.353	ENSTSYG00000000698	SNRNP48	100	87.059	Carlito_syrichta
ENSCHIG00000015216	SNRNP48	91	84.091	ENSCAPG00000006768	SNRNP48	100	84.091	Cavia_aperea
ENSCHIG00000015216	SNRNP48	100	86.765	ENSCPOG00000007910	SNRNP48	100	86.471	Cavia_porcellus
ENSCHIG00000015216	SNRNP48	100	86.765	ENSCCAG00000035652	SNRNP48	100	86.471	Cebus_capucinus
ENSCHIG00000015216	SNRNP48	100	87.647	ENSCATG00000033947	SNRNP48	100	87.353	Cercocebus_atys
ENSCHIG00000015216	SNRNP48	100	86.471	ENSCLAG00000003765	SNRNP48	100	86.176	Chinchilla_lanigera
ENSCHIG00000015216	SNRNP48	100	88.529	ENSCSAG00000007409	SNRNP48	100	87.647	Chlorocebus_sabaeus
ENSCHIG00000015216	SNRNP48	84	63.907	ENSCPBG00000019146	SNRNP48	90	64.407	Chrysemys_picta_bellii
ENSCHIG00000015216	SNRNP48	94	31.193	ENSCING00000004121	-	87	32.653	Ciona_intestinalis
ENSCHIG00000015216	SNRNP48	100	87.941	ENSCANG00000030017	SNRNP48	100	87.647	Colobus_angolensis_palliatus
ENSCHIG00000015216	SNRNP48	99	66.964	ENSCGRG00001008805	-	95	64.881	Cricetulus_griseus_chok1gshd
ENSCHIG00000015216	SNRNP48	100	85.000	ENSCGRG00001001076	-	100	83.824	Cricetulus_griseus_chok1gshd
ENSCHIG00000015216	SNRNP48	100	85.000	ENSCGRG00000007781	Snrnp48	100	83.824	Cricetulus_griseus_crigri
ENSCHIG00000015216	SNRNP48	76	48.289	ENSCSEG00000000722	snrnp48	69	48.413	Cynoglossus_semilaevis
ENSCHIG00000015216	SNRNP48	94	45.672	ENSCVAG00000019829	snrnp48	74	47.297	Cyprinodon_variegatus
ENSCHIG00000015216	SNRNP48	81	45.423	ENSDARG00000039989	snrnp48	93	41.916	Danio_rerio
ENSCHIG00000015216	SNRNP48	99	87.761	ENSDNOG00000014978	SNRNP48	99	87.761	Dasypus_novemcinctus
ENSCHIG00000015216	SNRNP48	99	84.956	ENSDORG00000015140	Snrnp48	99	84.956	Dipodomys_ordii
ENSCHIG00000015216	SNRNP48	99	90.560	ENSEASG00005012021	SNRNP48	99	89.381	Equus_asinus_asinus
ENSCHIG00000015216	SNRNP48	100	90.882	ENSECAG00000026937	SNRNP48	100	89.706	Equus_caballus
ENSCHIG00000015216	SNRNP48	100	67.742	ENSEEUG00000015437	SNRNP48	99	66.569	Erinaceus_europaeus
ENSCHIG00000015216	SNRNP48	88	48.701	ENSELUG00000009766	snrnp48	92	44.083	Esox_lucius
ENSCHIG00000015216	SNRNP48	100	90.588	ENSFCAG00000018853	SNRNP48	100	90.588	Felis_catus
ENSCHIG00000015216	SNRNP48	85	64.430	ENSFALG00000007797	SNRNP48	92	65.744	Ficedula_albicollis
ENSCHIG00000015216	SNRNP48	99	87.316	ENSFDAG00000009231	SNRNP48	99	86.726	Fukomys_damarensis
ENSCHIG00000015216	SNRNP48	59	54.680	ENSFHEG00000014647	snrnp48	97	47.157	Fundulus_heteroclitus
ENSCHIG00000015216	SNRNP48	73	47.600	ENSGMOG00000018599	-	77	46.899	Gadus_morhua
ENSCHIG00000015216	SNRNP48	82	63.194	ENSGALG00000013005	SNRNP48	90	66.667	Gallus_gallus
ENSCHIG00000015216	SNRNP48	73	49.219	ENSGAFG00000021639	snrnp48	85	43.385	Gambusia_affinis
ENSCHIG00000015216	SNRNP48	72	51.613	ENSGACG00000017756	-	95	43.064	Gasterosteus_aculeatus
ENSCHIG00000015216	SNRNP48	84	63.000	ENSGAGG00000000865	SNRNP48	96	63.390	Gopherus_agassizii
ENSCHIG00000015216	SNRNP48	100	87.941	ENSGGOG00000013220	SNRNP48	100	87.647	Gorilla_gorilla
ENSCHIG00000015216	SNRNP48	74	47.674	ENSHBUG00000017066	snrnp48	90	41.003	Haplochromis_burtoni
ENSCHIG00000015216	SNRNP48	99	87.611	ENSHGLG00000015241	SNRNP48	99	87.316	Heterocephalus_glaber_female
ENSCHIG00000015216	SNRNP48	99	87.611	ENSHGLG00100010027	SNRNP48	99	87.316	Heterocephalus_glaber_male
ENSCHIG00000015216	SNRNP48	71	45.714	ENSHCOG00000014066	snrnp48	91	41.411	Hippocampus_comes
ENSCHIG00000015216	SNRNP48	100	89.706	ENSSTOG00000014635	SNRNP48	100	88.824	Ictidomys_tridecemlineatus
ENSCHIG00000015216	SNRNP48	100	82.647	ENSJJAG00000011495	Snrnp48	100	82.059	Jaculus_jaculus
ENSCHIG00000015216	SNRNP48	82	45.230	ENSKMAG00000016514	snrnp48	91	41.867	Kryptolebias_marmoratus
ENSCHIG00000015216	SNRNP48	79	48.897	ENSLBEG00000026249	snrnp48	91	45.455	Labrus_bergylta
ENSCHIG00000015216	SNRNP48	96	53.939	ENSLACG00000003958	SNRNP48	94	53.517	Latimeria_chalumnae
ENSCHIG00000015216	SNRNP48	84	52.069	ENSLOCG00000004187	snrnp48	92	50.459	Lepisosteus_oculatus
ENSCHIG00000015216	SNRNP48	100	85.294	ENSLAFG00000011152	SNRNP48	100	85.588	Loxodonta_africana
ENSCHIG00000015216	SNRNP48	100	88.235	ENSMFAG00000045216	SNRNP48	100	87.941	Macaca_fascicularis
ENSCHIG00000015216	SNRNP48	100	88.235	ENSMMUG00000014785	SNRNP48	100	87.941	Macaca_mulatta
ENSCHIG00000015216	SNRNP48	100	87.941	ENSMNEG00000042269	SNRNP48	100	87.647	Macaca_nemestrina
ENSCHIG00000015216	SNRNP48	100	88.235	ENSMLEG00000034004	SNRNP48	100	87.941	Mandrillus_leucophaeus
ENSCHIG00000015216	SNRNP48	75	48.092	ENSMAMG00000018673	snrnp48	80	42.814	Mastacembelus_armatus
ENSCHIG00000015216	SNRNP48	82	63.946	ENSMGAG00000006037	SNRNP48	99	64.041	Meleagris_gallopavo
ENSCHIG00000015216	SNRNP48	100	85.294	ENSMAUG00000011944	Snrnp48	100	84.412	Mesocricetus_auratus
ENSCHIG00000015216	SNRNP48	100	86.176	ENSMICG00000012497	SNRNP48	100	86.471	Microcebus_murinus
ENSCHIG00000015216	SNRNP48	100	85.294	ENSMOCG00000015555	Snrnp48	100	84.412	Microtus_ochrogaster
ENSCHIG00000015216	SNRNP48	54	52.688	ENSMMOG00000003072	-	58	52.688	Mola_mola
ENSCHIG00000015216	SNRNP48	99	69.565	ENSMODG00000009996	SNRNP48	93	69.565	Monodelphis_domestica
ENSCHIG00000015216	SNRNP48	81	49.462	ENSMALG00000005725	snrnp48	91	44.910	Monopterus_albus
ENSCHIG00000015216	SNRNP48	100	84.118	MGP_CAROLIEiJ_G0018441	Snrnp48	100	83.529	Mus_caroli
ENSCHIG00000015216	SNRNP48	100	84.412	ENSMUSG00000021431	Snrnp48	100	83.235	Mus_musculus
ENSCHIG00000015216	SNRNP48	100	84.706	MGP_PahariEiJ_G0019509	Snrnp48	100	83.529	Mus_pahari
ENSCHIG00000015216	SNRNP48	100	84.706	MGP_SPRETEiJ_G0019321	Snrnp48	100	83.529	Mus_spretus
ENSCHIG00000015216	SNRNP48	99	84.366	ENSNGAG00000004849	Snrnp48	99	83.776	Nannospalax_galili
ENSCHIG00000015216	SNRNP48	74	47.287	ENSNBRG00000012127	snrnp48	78	45.652	Neolamprologus_brichardi
ENSCHIG00000015216	SNRNP48	100	88.235	ENSNLEG00000011667	SNRNP48	100	87.941	Nomascus_leucogenys
ENSCHIG00000015216	SNRNP48	95	75.926	ENSOPRG00000015471	SNRNP48	100	75.309	Ochotona_princeps
ENSCHIG00000015216	SNRNP48	76	47.510	ENSONIG00000001520	snrnp48	90	41.493	Oreochromis_niloticus
ENSCHIG00000015216	SNRNP48	57	62.981	ENSOANG00000019888	-	94	63.590	Ornithorhynchus_anatinus
ENSCHIG00000015216	SNRNP48	84	87.108	ENSOCUG00000005168	SNRNP48	100	86.557	Oryctolagus_cuniculus
ENSCHIG00000015216	SNRNP48	89	46.774	ENSORLG00000015654	snrnp48	90	44.611	Oryzias_latipes
ENSCHIG00000015216	SNRNP48	89	45.806	ENSORLG00020015976	snrnp48	75	44.512	Oryzias_latipes_hni
ENSCHIG00000015216	SNRNP48	89	46.774	ENSORLG00015022379	snrnp48	77	45.210	Oryzias_latipes_hsok
ENSCHIG00000015216	SNRNP48	83	46.207	ENSOMEG00000022007	snrnp48	91	44.311	Oryzias_melastigma
ENSCHIG00000015216	SNRNP48	92	87.500	ENSOGAG00000005275	SNRNP48	92	87.255	Otolemur_garnettii
ENSCHIG00000015216	SNRNP48	84	98.258	ENSOARG00000017319	SNRNP48	100	98.258	Ovis_aries
ENSCHIG00000015216	SNRNP48	100	88.235	ENSPPAG00000032873	SNRNP48	100	87.941	Pan_paniscus
ENSCHIG00000015216	SNRNP48	100	90.882	ENSPPRG00000004283	SNRNP48	100	90.588	Panthera_pardus
ENSCHIG00000015216	SNRNP48	84	91.638	ENSPTIG00000013502	SNRNP48	99	92.226	Panthera_tigris_altaica
ENSCHIG00000015216	SNRNP48	100	88.235	ENSPTRG00000017703	SNRNP48	100	87.941	Pan_troglodytes
ENSCHIG00000015216	SNRNP48	100	88.235	ENSPANG00000000771	SNRNP48	100	87.941	Papio_anubis
ENSCHIG00000015216	SNRNP48	94	47.399	ENSPKIG00000013703	snrnp48	69	46.356	Paramormyrops_kingsleyae
ENSCHIG00000015216	SNRNP48	84	63.366	ENSPSIG00000002213	SNRNP48	92	64.068	Pelodiscus_sinensis
ENSCHIG00000015216	SNRNP48	72	48.016	ENSPMGG00000008120	snrnp48	85	47.773	Periophthalmus_magnuspinnatus
ENSCHIG00000015216	SNRNP48	100	85.882	ENSPEMG00000008872	Snrnp48	100	85.000	Peromyscus_maniculatus_bairdii
ENSCHIG00000015216	SNRNP48	73	50.199	ENSPFOG00000003578	snrnp48	92	44.179	Poecilia_formosa
ENSCHIG00000015216	SNRNP48	66	49.561	ENSPLAG00000002290	snrnp48	75	48.889	Poecilia_latipinna
ENSCHIG00000015216	SNRNP48	73	49.402	ENSPMEG00000018033	snrnp48	92	43.582	Poecilia_mexicana
ENSCHIG00000015216	SNRNP48	71	49.796	ENSPREG00000018541	snrnp48	92	44.478	Poecilia_reticulata
ENSCHIG00000015216	SNRNP48	100	86.765	ENSPPYG00000016209	SNRNP48	100	86.471	Pongo_abelii
ENSCHIG00000015216	SNRNP48	79	69.776	ENSPCAG00000011991	SNRNP48	99	70.149	Procavia_capensis
ENSCHIG00000015216	SNRNP48	100	87.353	ENSPVAG00000002854	SNRNP48	100	87.059	Pteropus_vampyrus
ENSCHIG00000015216	SNRNP48	74	48.062	ENSPNYG00000015399	snrnp48	88	45.091	Pundamilia_nyererei
ENSCHIG00000015216	SNRNP48	100	85.000	ENSRNOG00000013756	Snrnp48	100	84.118	Rattus_norvegicus
ENSCHIG00000015216	SNRNP48	91	87.460	ENSRBIG00000043856	SNRNP48	98	87.781	Rhinopithecus_bieti
ENSCHIG00000015216	SNRNP48	100	87.941	ENSRROG00000043229	SNRNP48	100	87.647	Rhinopithecus_roxellana
ENSCHIG00000015216	SNRNP48	100	87.647	ENSSBOG00000019486	SNRNP48	100	87.353	Saimiri_boliviensis_boliviensis
ENSCHIG00000015216	SNRNP48	99	69.054	ENSSHAG00000014483	SNRNP48	100	69.054	Sarcophilus_harrisii
ENSCHIG00000015216	SNRNP48	75	50.562	ENSSFOG00015006610	snrnp48	67	48.239	Scleropages_formosus
ENSCHIG00000015216	SNRNP48	88	46.205	ENSSDUG00000014953	snrnp48	91	44.073	Seriola_dumerili
ENSCHIG00000015216	SNRNP48	88	46.535	ENSSLDG00000005989	snrnp48	91	44.012	Seriola_lalandi_dorsalis
ENSCHIG00000015216	SNRNP48	84	63.423	ENSSPUG00000006257	SNRNP48	84	63.823	Sphenodon_punctatus
ENSCHIG00000015216	SNRNP48	71	48.374	ENSSPAG00000006454	snrnp48	79	46.014	Stegastes_partitus
ENSCHIG00000015216	SNRNP48	83	63.574	ENSTGUG00000007575	SNRNP48	92	63.889	Taeniopygia_guttata
ENSCHIG00000015216	SNRNP48	74	49.802	ENSTRUG00000007031	snrnp48	91	43.750	Takifugu_rubripes
ENSCHIG00000015216	SNRNP48	75	46.304	ENSTNIG00000012977	-	71	47.934	Tetraodon_nigroviridis
ENSCHIG00000015216	SNRNP48	100	72.434	ENSTBEG00000015620	SNRNP48	100	71.176	Tupaia_belangeri
ENSCHIG00000015216	SNRNP48	100	89.412	ENSTTRG00000016715	SNRNP48	100	88.529	Tursiops_truncatus
ENSCHIG00000015216	SNRNP48	100	90.000	ENSUAMG00000003690	SNRNP48	100	89.412	Ursus_americanus
ENSCHIG00000015216	SNRNP48	84	89.199	ENSVPAG00000003557	SNRNP48	99	89.399	Vicugna_pacos
ENSCHIG00000015216	SNRNP48	99	88.462	ENSVVUG00000004996	SNRNP48	99	87.574	Vulpes_vulpes
ENSCHIG00000015216	SNRNP48	86	53.488	ENSXETG00000020447	snrnp48	95	51.652	Xenopus_tropicalis
ENSCHIG00000015216	SNRNP48	66	48.908	ENSXCOG00000004478	snrnp48	67	48.673	Xiphophorus_couchianus
ENSCHIG00000015216	SNRNP48	73	49.402	ENSXMAG00000013595	snrnp48	92	44.179	Xiphophorus_maculatus