EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000015220 (Gene tree)
Gene ID: 102176461
Gene Symbol: GFM1
Alias: EFGM|EGF1|GFM|mtEF-G1
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 51291 bases
Position: chr1:108408130-108459420
Accession: 102176461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000014076	GTP_EFTU	PF00009.27	1.4e-63	1	1
ENSCHIP00000014062	GTP_EFTU	PF00009.27	1.5e-63	1	1
ENSCHIP00000014062	GTP_EFTU_D2	PF03144.25	1.3e-16	1	1
ENSCHIP00000014076	GTP_EFTU_D2	PF03144.25	1.3e-16	1	1
ENSCHIP00000014062	EFG_IV	PF03764.18	3.8e-34	1	1
ENSCHIP00000014076	EFG_IV	PF03764.18	3.9e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000021869	GFM1-202	2256	-	ENSCHIP00000014076	751 (aa)	-	UPI000D196DF1
ENSCHIT00000021855	GFM1-201	2648	XM_005675390	ENSCHIP00000014062	753 (aa)	XP_005675447	UPI0003AFC505

Gene Model

Click here to download ENSCHIG00000015220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000015220's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000015220	GFM1	92	34.294	ENSCHIG00000012765	GFM2	91	34.431
ENSCHIG00000015220	GFM1	61	35.385	ENSCHIG00000010231	GUF1	63	38.562
ENSCHIG00000015220	GFM1	73	38.926	ENSCHIG00000013910	-	73	38.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000015220	GFM1	98	92.935	ENSG00000168827	GFM1	100	100.000	Homo_sapiens
ENSCHIG00000015220	GFM1	89	79.940	ENSAPOG00000016489	gfm1	96	79.790	Acanthochromis_polyacanthus
ENSCHIG00000015220	GFM1	98	94.181	ENSAMEG00000013542	GFM1	100	94.164	Ailuropoda_melanoleuca
ENSCHIG00000015220	GFM1	95	76.495	ENSACIG00000014465	gfm1	93	76.495	Amphilophus_citrinellus
ENSCHIG00000015220	GFM1	95	81.066	ENSAOCG00000006023	gfm1	95	81.066	Amphiprion_ocellaris
ENSCHIG00000015220	GFM1	95	81.066	ENSAPEG00000024499	gfm1	99	80.447	Amphiprion_percula
ENSCHIG00000015220	GFM1	95	80.641	ENSATEG00000013789	gfm1	96	80.641	Anabas_testudineus
ENSCHIG00000015220	GFM1	95	82.893	ENSAPLG00000005022	GFM1	99	82.893	Anas_platyrhynchos
ENSCHIG00000015220	GFM1	96	82.645	ENSACAG00000006829	GFM1	98	82.645	Anolis_carolinensis
ENSCHIG00000015220	GFM1	100	92.042	ENSANAG00000035983	GFM1	100	92.042	Aotus_nancymaae
ENSCHIG00000015220	GFM1	95	82.312	ENSACLG00000016586	gfm1	98	80.860	Astatotilapia_calliptera
ENSCHIG00000015220	GFM1	100	78.780	ENSAMXG00000013435	gfm1	98	79.622	Astyanax_mexicanus
ENSCHIG00000015220	GFM1	100	98.938	ENSBTAG00000027795	GFM1	100	98.938	Bos_taurus
ENSCHIG00000015220	GFM1	97	55.163	WBGene00009246	gfm-1	99	55.020	Caenorhabditis_elegans
ENSCHIG00000015220	GFM1	100	92.175	ENSCJAG00000000363	GFM1	100	92.175	Callithrix_jacchus
ENSCHIG00000015220	GFM1	98	93.767	ENSCAFG00000009006	GFM1	100	94.970	Canis_familiaris
ENSCHIG00000015220	GFM1	98	94.046	ENSCAFG00020005878	GFM1	99	94.890	Canis_lupus_dingo
ENSCHIG00000015220	GFM1	100	94.032	ENSTSYG00000002013	GFM1	100	94.032	Carlito_syrichta
ENSCHIG00000015220	GFM1	96	81.543	ENSCAPG00000005699	GFM1	98	81.543	Cavia_aperea
ENSCHIG00000015220	GFM1	100	92.440	ENSCPOG00000001194	GFM1	100	92.440	Cavia_porcellus
ENSCHIG00000015220	GFM1	100	92.175	ENSCCAG00000025561	GFM1	100	92.175	Cebus_capucinus
ENSCHIG00000015220	GFM1	100	91.910	ENSCATG00000037622	GFM1	100	91.910	Cercocebus_atys
ENSCHIG00000015220	GFM1	98	91.757	ENSCLAG00000002503	GFM1	100	91.258	Chinchilla_lanigera
ENSCHIG00000015220	GFM1	100	91.910	ENSCSAG00000012162	GFM1	100	91.910	Chlorocebus_sabaeus
ENSCHIG00000015220	GFM1	100	84.085	ENSCHOG00000004867	GFM1	100	84.085	Choloepus_hoffmanni
ENSCHIG00000015220	GFM1	99	82.392	ENSCPBG00000018367	GFM1	99	82.815	Chrysemys_picta_bellii
ENSCHIG00000015220	GFM1	97	57.881	ENSCING00000011960	-	98	57.881	Ciona_intestinalis
ENSCHIG00000015220	GFM1	95	59.917	ENSCSAVG00000008514	-	99	59.917	Ciona_savignyi
ENSCHIG00000015220	GFM1	98	92.799	ENSCANG00000031714	GFM1	100	92.308	Colobus_angolensis_palliatus
ENSCHIG00000015220	GFM1	100	93.493	ENSCGRG00001022095	GFM1	100	93.493	Cricetulus_griseus_chok1gshd
ENSCHIG00000015220	GFM1	100	93.493	ENSCGRG00000012043	GFM1	100	93.493	Cricetulus_griseus_crigri
ENSCHIG00000015220	GFM1	95	76.880	ENSCSEG00000017088	gfm1	98	76.880	Cynoglossus_semilaevis
ENSCHIG00000015220	GFM1	96	82.639	ENSCVAG00000004126	gfm1	99	81.549	Cyprinodon_variegatus
ENSCHIG00000015220	GFM1	100	76.627	ENSDARG00000063624	gfm1	96	79.109	Danio_rerio
ENSCHIG00000015220	GFM1	54	91.932	ENSDNOG00000016385	-	100	91.932	Dasypus_novemcinctus
ENSCHIG00000015220	GFM1	100	89.390	ENSDORG00000014165	Gfm1	100	89.390	Dipodomys_ordii
ENSCHIG00000015220	GFM1	94	67.560	FBgn0263133	mEFG1	95	67.560	Drosophila_melanogaster
ENSCHIG00000015220	GFM1	98	83.536	ENSETEG00000019197	GFM1	100	83.333	Echinops_telfairi
ENSCHIG00000015220	GFM1	90	66.914	ENSEBUG00000012794	gfm1	99	66.914	Eptatretus_burgeri
ENSCHIG00000015220	GFM1	96	70.345	ENSEEUG00000000429	GFM1	99	70.345	Erinaceus_europaeus
ENSCHIG00000015220	GFM1	100	76.228	ENSELUG00000014728	gfm1	98	77.279	Esox_lucius
ENSCHIG00000015220	GFM1	98	95.399	ENSFCAG00000013291	GFM1	100	95.225	Felis_catus
ENSCHIG00000015220	GFM1	90	83.259	ENSFALG00000007619	GFM1	100	83.259	Ficedula_albicollis
ENSCHIG00000015220	GFM1	100	91.645	ENSFDAG00000016559	GFM1	100	91.645	Fukomys_damarensis
ENSCHIG00000015220	GFM1	95	81.755	ENSFHEG00000006091	gfm1	96	81.755	Fundulus_heteroclitus
ENSCHIG00000015220	GFM1	95	79.501	ENSGMOG00000010161	gfm1	99	79.501	Gadus_morhua
ENSCHIG00000015220	GFM1	99	80.455	ENSGALG00000009634	GFM1	98	82.069	Gallus_gallus
ENSCHIG00000015220	GFM1	95	82.173	ENSGAFG00000012527	gfm1	96	82.173	Gambusia_affinis
ENSCHIG00000015220	GFM1	99	77.955	ENSGACG00000009864	gfm1	97	79.586	Gasterosteus_aculeatus
ENSCHIG00000015220	GFM1	98	93.207	ENSGGOG00000003085	GFM1	100	92.706	Gorilla_gorilla
ENSCHIG00000015220	GFM1	95	82.451	ENSHBUG00000002120	gfm1	96	82.451	Haplochromis_burtoni
ENSCHIG00000015220	GFM1	100	92.308	ENSHGLG00000016855	GFM1	100	92.308	Heterocephalus_glaber_female
ENSCHIG00000015220	GFM1	100	92.308	ENSHGLG00100013049	GFM1	100	92.308	Heterocephalus_glaber_male
ENSCHIG00000015220	GFM1	95	81.066	ENSHCOG00000007638	gfm1	97	80.909	Hippocampus_comes
ENSCHIG00000015220	GFM1	100	78.220	ENSIPUG00000005873	gfm1	97	80.276	Ictalurus_punctatus
ENSCHIG00000015220	GFM1	98	91.870	ENSSTOG00000010150	GFM1	99	91.870	Ictidomys_tridecemlineatus
ENSCHIG00000015220	GFM1	100	92.297	ENSJJAG00000016447	Gfm1	100	92.297	Jaculus_jaculus
ENSCHIG00000015220	GFM1	95	79.805	ENSKMAG00000020768	gfm1	96	79.805	Kryptolebias_marmoratus
ENSCHIG00000015220	GFM1	93	80.742	ENSLBEG00000021315	gfm1	100	80.742	Labrus_bergylta
ENSCHIG00000015220	GFM1	96	80.933	ENSLACG00000012295	GFM1	99	80.933	Latimeria_chalumnae
ENSCHIG00000015220	GFM1	95	75.661	ENSLOCG00000003778	gfm1	99	75.661	Lepisosteus_oculatus
ENSCHIG00000015220	GFM1	97	90.773	ENSLAFG00000010945	GFM1	100	89.793	Loxodonta_africana
ENSCHIG00000015220	GFM1	100	92.175	ENSMFAG00000035731	GFM1	100	92.175	Macaca_fascicularis
ENSCHIG00000015220	GFM1	100	92.308	ENSMMUG00000004961	GFM1	100	92.308	Macaca_mulatta
ENSCHIG00000015220	GFM1	100	92.308	ENSMNEG00000033245	GFM1	100	92.308	Macaca_nemestrina
ENSCHIG00000015220	GFM1	96	91.172	ENSMLEG00000030908	GFM1	100	90.983	Mandrillus_leucophaeus
ENSCHIG00000015220	GFM1	95	82.033	ENSMAMG00000011760	gfm1	96	82.033	Mastacembelus_armatus
ENSCHIG00000015220	GFM1	95	82.451	ENSMZEG00005016639	gfm1	96	82.451	Maylandia_zebra
ENSCHIG00000015220	GFM1	95	82.591	ENSMGAG00000010641	GFM1	96	82.591	Meleagris_gallopavo
ENSCHIG00000015220	GFM1	99	94.497	ENSMAUG00000000611	Gfm1	99	94.609	Mesocricetus_auratus
ENSCHIG00000015220	GFM1	98	94.158	ENSMICG00000049086	GFM1	100	93.767	Microcebus_murinus
ENSCHIG00000015220	GFM1	100	93.493	ENSMOCG00000000465	Gfm1	100	93.493	Microtus_ochrogaster
ENSCHIG00000015220	GFM1	95	80.919	ENSMMOG00000012538	gfm1	97	80.919	Mola_mola
ENSCHIG00000015220	GFM1	96	87.190	ENSMODG00000015673	GFM1	98	87.190	Monodelphis_domestica
ENSCHIG00000015220	GFM1	99	78.898	ENSMALG00000012508	gfm1	96	80.668	Monopterus_albus
ENSCHIG00000015220	GFM1	100	93.360	MGP_CAROLIEiJ_G0025052	Gfm1	100	93.360	Mus_caroli
ENSCHIG00000015220	GFM1	100	93.360	ENSMUSG00000027774	Gfm1	100	93.360	Mus_musculus
ENSCHIG00000015220	GFM1	100	93.360	MGP_PahariEiJ_G0026495	Gfm1	100	93.360	Mus_pahari
ENSCHIG00000015220	GFM1	100	93.360	MGP_SPRETEiJ_G0025994	Gfm1	100	93.360	Mus_spretus
ENSCHIG00000015220	GFM1	100	93.899	ENSMPUG00000002859	GFM1	100	93.899	Mustela_putorius_furo
ENSCHIG00000015220	GFM1	100	94.297	ENSMLUG00000000452	GFM1	100	94.297	Myotis_lucifugus
ENSCHIG00000015220	GFM1	100	91.766	ENSNGAG00000012375	Gfm1	100	91.766	Nannospalax_galili
ENSCHIG00000015220	GFM1	95	82.173	ENSNBRG00000004631	gfm1	98	82.173	Neolamprologus_brichardi
ENSCHIG00000015220	GFM1	98	93.342	ENSNLEG00000004176	GFM1	100	92.838	Nomascus_leucogenys
ENSCHIG00000015220	GFM1	84	88.889	ENSMEUG00000007784	GFM1	92	88.889	Notamacropus_eugenii
ENSCHIG00000015220	GFM1	100	89.655	ENSOPRG00000009860	GFM1	99	90.996	Ochotona_princeps
ENSCHIG00000015220	GFM1	98	93.234	ENSODEG00000004316	GFM1	100	92.706	Octodon_degus
ENSCHIG00000015220	GFM1	95	82.451	ENSONIG00000003772	gfm1	96	82.451	Oreochromis_niloticus
ENSCHIG00000015220	GFM1	98	93.505	ENSOCUG00000013561	GFM1	100	93.236	Oryctolagus_cuniculus
ENSCHIG00000015220	GFM1	94	81.638	ENSORLG00000006487	gfm1	100	81.638	Oryzias_latipes
ENSCHIG00000015220	GFM1	95	81.476	ENSORLG00020003362	gfm1	96	81.476	Oryzias_latipes_hni
ENSCHIG00000015220	GFM1	95	81.058	ENSORLG00015005829	gfm1	96	81.058	Oryzias_latipes_hsok
ENSCHIG00000015220	GFM1	95	82.173	ENSOMEG00000012894	gfm1	96	82.173	Oryzias_melastigma
ENSCHIG00000015220	GFM1	100	93.369	ENSOGAG00000008298	GFM1	100	93.369	Otolemur_garnettii
ENSCHIG00000015220	GFM1	96	98.624	ENSOARG00000002409	GFM1	100	98.624	Ovis_aries
ENSCHIG00000015220	GFM1	98	93.207	ENSPPAG00000033881	GFM1	100	92.706	Pan_paniscus
ENSCHIG00000015220	GFM1	98	95.264	ENSPPRG00000009281	GFM1	100	95.093	Panthera_pardus
ENSCHIG00000015220	GFM1	98	95.129	ENSPTIG00000012416	GFM1	100	94.960	Panthera_tigris_altaica
ENSCHIG00000015220	GFM1	98	93.207	ENSPTRG00000015570	GFM1	100	92.706	Pan_troglodytes
ENSCHIG00000015220	GFM1	100	92.175	ENSPANG00000016512	GFM1	100	92.175	Papio_anubis
ENSCHIG00000015220	GFM1	95	81.450	ENSPKIG00000004876	gfm1	96	81.450	Paramormyrops_kingsleyae
ENSCHIG00000015220	GFM1	99	82.392	ENSPSIG00000012567	GFM1	99	82.815	Pelodiscus_sinensis
ENSCHIG00000015220	GFM1	95	80.583	ENSPMGG00000014068	gfm1	99	80.583	Periophthalmus_magnuspinnatus
ENSCHIG00000015220	GFM1	100	93.758	ENSPEMG00000008942	Gfm1	100	93.758	Peromyscus_maniculatus_bairdii
ENSCHIG00000015220	GFM1	84	85.714	ENSPCIG00000020195	GFM1	97	85.714	Phascolarctos_cinereus
ENSCHIG00000015220	GFM1	95	82.869	ENSPFOG00000011022	gfm1	96	82.869	Poecilia_formosa
ENSCHIG00000015220	GFM1	95	82.591	ENSPLAG00000019585	gfm1	96	82.111	Poecilia_latipinna
ENSCHIG00000015220	GFM1	95	82.730	ENSPMEG00000012376	gfm1	96	82.730	Poecilia_mexicana
ENSCHIG00000015220	GFM1	95	82.312	ENSPREG00000001332	gfm1	91	82.312	Poecilia_reticulata
ENSCHIG00000015220	GFM1	98	93.207	ENSPPYG00000014244	GFM1	100	92.706	Pongo_abelii
ENSCHIG00000015220	GFM1	93	88.762	ENSPCAG00000008934	GFM1	100	88.762	Procavia_capensis
ENSCHIG00000015220	GFM1	98	94.973	ENSPCOG00000022259	GFM1	100	94.695	Propithecus_coquereli
ENSCHIG00000015220	GFM1	100	94.828	ENSPVAG00000013605	GFM1	100	94.828	Pteropus_vampyrus
ENSCHIG00000015220	GFM1	95	82.173	ENSPNYG00000006037	gfm1	99	80.764	Pundamilia_nyererei
ENSCHIG00000015220	GFM1	100	78.752	ENSPNAG00000001237	gfm1	100	78.752	Pygocentrus_nattereri
ENSCHIG00000015220	GFM1	100	92.829	ENSRNOG00000012873	Gfm1	100	92.829	Rattus_norvegicus
ENSCHIG00000015220	GFM1	98	92.663	ENSRBIG00000031363	GFM1	100	92.175	Rhinopithecus_bieti
ENSCHIG00000015220	GFM1	98	92.799	ENSRROG00000031081	GFM1	100	92.308	Rhinopithecus_roxellana
ENSCHIG00000015220	GFM1	92	56.772	YLR069C	-	90	56.772	Saccharomyces_cerevisiae
ENSCHIG00000015220	GFM1	100	92.838	ENSSBOG00000023252	GFM1	100	92.838	Saimiri_boliviensis_boliviensis
ENSCHIG00000015220	GFM1	98	87.584	ENSSHAG00000017772	GFM1	99	87.584	Sarcophilus_harrisii
ENSCHIG00000015220	GFM1	96	80.690	ENSSFOG00015003117	gfm1	99	80.690	Scleropages_formosus
ENSCHIG00000015220	GFM1	99	77.321	ENSSMAG00000013221	gfm1	96	79.526	Scophthalmus_maximus
ENSCHIG00000015220	GFM1	98	78.677	ENSSDUG00000018665	gfm1	96	80.362	Seriola_dumerili
ENSCHIG00000015220	GFM1	98	78.571	ENSSLDG00000020606	gfm1	96	80.362	Seriola_lalandi_dorsalis
ENSCHIG00000015220	GFM1	95	81.476	ENSSPUG00000018686	GFM1	97	81.476	Sphenodon_punctatus
ENSCHIG00000015220	GFM1	95	80.919	ENSSPAG00000008800	gfm1	96	80.919	Stegastes_partitus
ENSCHIG00000015220	GFM1	100	95.093	ENSSSCG00000025651	GFM1	100	95.093	Sus_scrofa
ENSCHIG00000015220	GFM1	100	77.955	ENSTRUG00000009244	gfm1	99	78.755	Takifugu_rubripes
ENSCHIG00000015220	GFM1	95	81.476	ENSTNIG00000007729	gfm1	96	81.476	Tetraodon_nigroviridis
ENSCHIG00000015220	GFM1	98	77.598	ENSTBEG00000017404	GFM1	100	77.778	Tupaia_belangeri
ENSCHIG00000015220	GFM1	100	95.244	ENSTTRG00000001735	GFM1	100	95.112	Tursiops_truncatus
ENSCHIG00000015220	GFM1	98	94.993	ENSUAMG00000026381	GFM1	100	94.960	Ursus_americanus
ENSCHIG00000015220	GFM1	98	94.858	ENSUMAG00000011268	GFM1	100	94.828	Ursus_maritimus
ENSCHIG00000015220	GFM1	100	92.032	ENSVPAG00000009444	GFM1	100	92.032	Vicugna_pacos
ENSCHIG00000015220	GFM1	99	92.400	ENSVVUG00000020091	GFM1	100	94.527	Vulpes_vulpes
ENSCHIG00000015220	GFM1	100	82.228	ENSXETG00000032551	GFM1	100	82.228	Xenopus_tropicalis
ENSCHIG00000015220	GFM1	52	80.879	ENSXCOG00000012590	gfm1	89	80.879	Xiphophorus_couchianus
ENSCHIG00000015220	GFM1	95	82.173	ENSXMAG00000000261	gfm1	96	82.173	Xiphophorus_maculatus