EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000015253 (Gene tree)
Gene ID: 102171399
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 6043 bases
Position: chr26:32953818-32959860
Accession: 102171399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000014073	EXOSC1	PF10447.9	6.3e-15	1	1
ENSCHIP00000014073	ECR1_N	PF14382.6	6.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000021866	EXOSC1-201	588	XM_005698286	ENSCHIP00000014073	195 (aa)	XP_005698343	UPI00004CEBC0

Gene Model

Click here to download ENSCHIG00000015253's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000015253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000015253	EXOSC1	100	96.923	ENSG00000171311	EXOSC1	100	96.923	Homo_sapiens
ENSCHIG00000015253	EXOSC1	98	80.628	ENSAPOG00000007822	exosc1	98	80.628	Acanthochromis_polyacanthus
ENSCHIG00000015253	EXOSC1	100	99.487	ENSAMEG00000000129	EXOSC1	100	99.487	Ailuropoda_melanoleuca
ENSCHIG00000015253	EXOSC1	96	80.319	ENSACIG00000018956	exosc1	92	80.319	Amphilophus_citrinellus
ENSCHIG00000015253	EXOSC1	98	80.628	ENSAOCG00000010699	exosc1	98	80.628	Amphiprion_ocellaris
ENSCHIG00000015253	EXOSC1	92	71.508	ENSAPEG00000012690	exosc1	96	71.508	Amphiprion_percula
ENSCHIG00000015253	EXOSC1	98	80.105	ENSATEG00000018683	exosc1	98	80.105	Anabas_testudineus
ENSCHIG00000015253	EXOSC1	99	86.010	ENSACAG00000002101	EXOSC1	99	86.010	Anolis_carolinensis
ENSCHIG00000015253	EXOSC1	100	98.462	ENSANAG00000034669	EXOSC1	100	98.462	Aotus_nancymaae
ENSCHIG00000015253	EXOSC1	98	80.628	ENSACLG00000021243	exosc1	98	80.628	Astatotilapia_calliptera
ENSCHIG00000015253	EXOSC1	98	82.199	ENSAMXG00000011116	exosc1	98	82.199	Astyanax_mexicanus
ENSCHIG00000015253	EXOSC1	100	100.000	ENSBTAG00000012699	EXOSC1	100	100.000	Bos_taurus
ENSCHIG00000015253	EXOSC1	92	33.511	WBGene00012966	exos-1	90	33.511	Caenorhabditis_elegans
ENSCHIG00000015253	EXOSC1	100	97.949	ENSCJAG00000016586	EXOSC1	100	97.949	Callithrix_jacchus
ENSCHIG00000015253	EXOSC1	100	98.974	ENSCAFG00000009068	EXOSC1	94	98.974	Canis_familiaris
ENSCHIG00000015253	EXOSC1	100	98.974	ENSCAFG00020006002	EXOSC1	94	98.974	Canis_lupus_dingo
ENSCHIG00000015253	EXOSC1	100	97.436	ENSTSYG00000000760	EXOSC1	100	97.436	Carlito_syrichta
ENSCHIG00000015253	EXOSC1	100	98.462	ENSCPOG00000001173	EXOSC1	100	98.462	Cavia_porcellus
ENSCHIG00000015253	EXOSC1	100	56.345	ENSCCAG00000023986	EXOSC1	100	56.345	Cebus_capucinus
ENSCHIG00000015253	EXOSC1	100	96.923	ENSCATG00000034114	EXOSC1	100	96.923	Cercocebus_atys
ENSCHIG00000015253	EXOSC1	100	98.974	ENSCLAG00000002463	EXOSC1	100	98.974	Chinchilla_lanigera
ENSCHIG00000015253	EXOSC1	100	96.410	ENSCSAG00000005870	EXOSC1	100	96.410	Chlorocebus_sabaeus
ENSCHIG00000015253	EXOSC1	96	83.957	ENSCHOG00000006477	EXOSC1	100	83.957	Choloepus_hoffmanni
ENSCHIG00000015253	EXOSC1	54	82.075	ENSCPBG00000011949	EXOSC1	88	82.075	Chrysemys_picta_bellii
ENSCHIG00000015253	EXOSC1	95	56.684	ENSCING00000022734	-	89	56.684	Ciona_intestinalis
ENSCHIG00000015253	EXOSC1	95	58.289	ENSCSAVG00000010865	-	95	58.289	Ciona_savignyi
ENSCHIG00000015253	EXOSC1	100	96.923	ENSCANG00000034159	EXOSC1	100	96.923	Colobus_angolensis_palliatus
ENSCHIG00000015253	EXOSC1	100	97.949	ENSCGRG00001000335	Exosc1	100	97.949	Cricetulus_griseus_chok1gshd
ENSCHIG00000015253	EXOSC1	100	97.949	ENSCGRG00000011602	Exosc1	100	97.949	Cricetulus_griseus_crigri
ENSCHIG00000015253	EXOSC1	98	67.539	ENSCSEG00000007895	exosc1	95	67.539	Cynoglossus_semilaevis
ENSCHIG00000015253	EXOSC1	98	76.963	ENSCVAG00000016748	exosc1	98	76.963	Cyprinodon_variegatus
ENSCHIG00000015253	EXOSC1	98	81.152	ENSDARG00000059841	exosc1	98	81.152	Danio_rerio
ENSCHIG00000015253	EXOSC1	75	97.973	ENSDNOG00000007983	EXOSC1	100	97.973	Dasypus_novemcinctus
ENSCHIG00000015253	EXOSC1	100	98.462	ENSDORG00000016528	Exosc1	100	98.462	Dipodomys_ordii
ENSCHIG00000015253	EXOSC1	94	48.148	FBgn0032346	Csl4	92	48.148	Drosophila_melanogaster
ENSCHIG00000015253	EXOSC1	100	95.385	ENSETEG00000002469	-	100	95.385	Echinops_telfairi
ENSCHIG00000015253	EXOSC1	99	62.755	ENSEBUG00000008164	exosc1	98	62.755	Eptatretus_burgeri
ENSCHIG00000015253	EXOSC1	100	88.205	ENSEASG00005008684	EXOSC1	100	88.205	Equus_asinus_asinus
ENSCHIG00000015253	EXOSC1	61	78.151	ENSECAG00000010621	EXOSC1	71	78.151	Equus_caballus
ENSCHIG00000015253	EXOSC1	100	97.436	ENSEEUG00000005647	EXOSC1	100	97.436	Erinaceus_europaeus
ENSCHIG00000015253	EXOSC1	94	81.522	ENSELUG00000017369	exosc1	81	81.522	Esox_lucius
ENSCHIG00000015253	EXOSC1	100	99.487	ENSFCAG00000040563	EXOSC1	94	99.487	Felis_catus
ENSCHIG00000015253	EXOSC1	100	83.077	ENSFALG00000008450	EXOSC1	100	83.077	Ficedula_albicollis
ENSCHIG00000015253	EXOSC1	100	98.462	ENSFDAG00000000846	EXOSC1	100	98.462	Fukomys_damarensis
ENSCHIG00000015253	EXOSC1	98	76.963	ENSFHEG00000009154	exosc1	98	76.963	Fundulus_heteroclitus
ENSCHIG00000015253	EXOSC1	98	80.628	ENSGMOG00000008993	exosc1	98	80.628	Gadus_morhua
ENSCHIG00000015253	EXOSC1	100	72.821	ENSGALG00000039917	EXOSC1	100	86.301	Gallus_gallus
ENSCHIG00000015253	EXOSC1	98	76.963	ENSGAFG00000010265	exosc1	94	76.963	Gambusia_affinis
ENSCHIG00000015253	EXOSC1	98	80.628	ENSGACG00000018936	exosc1	98	80.628	Gasterosteus_aculeatus
ENSCHIG00000015253	EXOSC1	100	85.128	ENSGAGG00000019192	EXOSC1	100	85.128	Gopherus_agassizii
ENSCHIG00000015253	EXOSC1	100	85.128	ENSGGOG00000003099	EXOSC1	100	85.128	Gorilla_gorilla
ENSCHIG00000015253	EXOSC1	98	80.628	ENSHBUG00000017857	exosc1	98	80.628	Haplochromis_burtoni
ENSCHIG00000015253	EXOSC1	100	97.949	ENSHGLG00000016927	EXOSC1	100	97.949	Heterocephalus_glaber_female
ENSCHIG00000015253	EXOSC1	100	97.949	ENSHGLG00100012208	EXOSC1	100	97.949	Heterocephalus_glaber_male
ENSCHIG00000015253	EXOSC1	98	79.581	ENSHCOG00000019882	exosc1	98	79.581	Hippocampus_comes
ENSCHIG00000015253	EXOSC1	98	81.152	ENSIPUG00000007685	exosc1	98	81.152	Ictalurus_punctatus
ENSCHIG00000015253	EXOSC1	100	98.462	ENSSTOG00000006615	EXOSC1	100	98.462	Ictidomys_tridecemlineatus
ENSCHIG00000015253	EXOSC1	63	82.787	ENSSTOG00000029860	-	93	82.787	Ictidomys_tridecemlineatus
ENSCHIG00000015253	EXOSC1	100	99.487	ENSJJAG00000013311	Exosc1	100	99.487	Jaculus_jaculus
ENSCHIG00000015253	EXOSC1	98	78.646	ENSKMAG00000001202	exosc1	81	78.646	Kryptolebias_marmoratus
ENSCHIG00000015253	EXOSC1	98	80.105	ENSLBEG00000011448	exosc1	98	80.105	Labrus_bergylta
ENSCHIG00000015253	EXOSC1	98	58.586	ENSLOCG00000003776	exosc1	99	58.586	Lepisosteus_oculatus
ENSCHIG00000015253	EXOSC1	100	97.436	ENSLAFG00000015983	EXOSC1	100	97.436	Loxodonta_africana
ENSCHIG00000015253	EXOSC1	100	96.923	ENSMFAG00000001493	EXOSC1	100	96.923	Macaca_fascicularis
ENSCHIG00000015253	EXOSC1	100	96.923	ENSMMUG00000020028	EXOSC1	100	89.950	Macaca_mulatta
ENSCHIG00000015253	EXOSC1	100	96.923	ENSMNEG00000029816	EXOSC1	100	96.923	Macaca_nemestrina
ENSCHIG00000015253	EXOSC1	100	91.282	ENSMLEG00000027643	EXOSC1	100	91.282	Mandrillus_leucophaeus
ENSCHIG00000015253	EXOSC1	98	81.152	ENSMAMG00000012200	exosc1	98	81.152	Mastacembelus_armatus
ENSCHIG00000015253	EXOSC1	98	80.628	ENSMZEG00005007042	exosc1	98	80.628	Maylandia_zebra
ENSCHIG00000015253	EXOSC1	100	86.154	ENSMAUG00000020462	-	100	86.154	Mesocricetus_auratus
ENSCHIG00000015253	EXOSC1	100	97.949	ENSMICG00000007664	EXOSC1	92	97.949	Microcebus_murinus
ENSCHIG00000015253	EXOSC1	100	97.949	ENSMOCG00000006004	-	100	97.949	Microtus_ochrogaster
ENSCHIG00000015253	EXOSC1	97	91.579	ENSMOCG00000017124	-	97	91.579	Microtus_ochrogaster
ENSCHIG00000015253	EXOSC1	99	60.825	ENSMMOG00000021403	exosc1	99	60.825	Mola_mola
ENSCHIG00000015253	EXOSC1	100	92.857	ENSMODG00000004213	EXOSC1	100	92.857	Monodelphis_domestica
ENSCHIG00000015253	EXOSC1	94	81.522	ENSMALG00000007061	exosc1	92	81.522	Monopterus_albus
ENSCHIG00000015253	EXOSC1	100	97.436	MGP_CAROLIEiJ_G0022959	Exosc1	100	97.436	Mus_caroli
ENSCHIG00000015253	EXOSC1	100	96.923	ENSMUSG00000034321	Exosc1	100	96.923	Mus_musculus
ENSCHIG00000015253	EXOSC1	100	97.949	MGP_PahariEiJ_G0014449	Exosc1	100	97.949	Mus_pahari
ENSCHIG00000015253	EXOSC1	100	97.436	MGP_SPRETEiJ_G0023880	Exosc1	100	97.436	Mus_spretus
ENSCHIG00000015253	EXOSC1	100	99.487	ENSMPUG00000017044	EXOSC1	100	99.487	Mustela_putorius_furo
ENSCHIG00000015253	EXOSC1	100	97.949	ENSMLUG00000009228	EXOSC1	100	97.949	Myotis_lucifugus
ENSCHIG00000015253	EXOSC1	100	96.923	ENSNGAG00000022033	Exosc1	100	96.923	Nannospalax_galili
ENSCHIG00000015253	EXOSC1	98	61.257	ENSNBRG00000024007	exosc1	97	61.257	Neolamprologus_brichardi
ENSCHIG00000015253	EXOSC1	100	96.410	ENSNLEG00000013872	EXOSC1	100	96.410	Nomascus_leucogenys
ENSCHIG00000015253	EXOSC1	59	91.304	ENSMEUG00000002246	EXOSC1	100	91.304	Notamacropus_eugenii
ENSCHIG00000015253	EXOSC1	100	97.436	ENSOPRG00000005065	EXOSC1	100	97.436	Ochotona_princeps
ENSCHIG00000015253	EXOSC1	100	98.462	ENSODEG00000016709	EXOSC1	100	98.462	Octodon_degus
ENSCHIG00000015253	EXOSC1	98	80.628	ENSONIG00000017683	exosc1	98	80.628	Oreochromis_niloticus
ENSCHIG00000015253	EXOSC1	59	93.913	ENSOANG00000006563	EXOSC1	98	91.935	Ornithorhynchus_anatinus
ENSCHIG00000015253	EXOSC1	100	97.959	ENSOCUG00000011898	-	100	97.959	Oryctolagus_cuniculus
ENSCHIG00000015253	EXOSC1	100	92.821	ENSOCUG00000026461	-	100	92.821	Oryctolagus_cuniculus
ENSCHIG00000015253	EXOSC1	98	79.167	ENSORLG00000011595	exosc1	98	79.167	Oryzias_latipes
ENSCHIG00000015253	EXOSC1	98	79.167	ENSORLG00020005831	exosc1	98	79.167	Oryzias_latipes_hni
ENSCHIG00000015253	EXOSC1	98	79.167	ENSORLG00015004317	exosc1	98	79.167	Oryzias_latipes_hsok
ENSCHIG00000015253	EXOSC1	98	63.874	ENSOMEG00000013907	exosc1	98	63.874	Oryzias_melastigma
ENSCHIG00000015253	EXOSC1	100	98.462	ENSOGAG00000016259	EXOSC1	100	98.462	Otolemur_garnettii
ENSCHIG00000015253	EXOSC1	100	99.487	ENSOARG00000010136	EXOSC1	100	99.487	Ovis_aries
ENSCHIG00000015253	EXOSC1	100	90.863	ENSPPAG00000039842	EXOSC1	100	90.863	Pan_paniscus
ENSCHIG00000015253	EXOSC1	100	99.487	ENSPPRG00000023366	EXOSC1	100	99.487	Panthera_pardus
ENSCHIG00000015253	EXOSC1	100	99.487	ENSPTIG00000017701	EXOSC1	100	99.487	Panthera_tigris_altaica
ENSCHIG00000015253	EXOSC1	100	96.923	ENSPTRG00000002808	EXOSC1	100	96.923	Pan_troglodytes
ENSCHIG00000015253	EXOSC1	100	96.923	ENSPANG00000021324	EXOSC1	100	96.923	Papio_anubis
ENSCHIG00000015253	EXOSC1	98	81.675	ENSPKIG00000016037	exosc1	98	81.675	Paramormyrops_kingsleyae
ENSCHIG00000015253	EXOSC1	75	81.507	ENSPSIG00000013571	EXOSC1	98	81.148	Pelodiscus_sinensis
ENSCHIG00000015253	EXOSC1	98	68.586	ENSPMGG00000014002	exosc1	98	68.586	Periophthalmus_magnuspinnatus
ENSCHIG00000015253	EXOSC1	100	97.949	ENSPEMG00000010710	-	100	97.949	Peromyscus_maniculatus_bairdii
ENSCHIG00000015253	EXOSC1	95	71.658	ENSPMAG00000000195	exosc1	95	71.658	Petromyzon_marinus
ENSCHIG00000015253	EXOSC1	100	93.846	ENSPCIG00000002210	EXOSC1	99	93.846	Phascolarctos_cinereus
ENSCHIG00000015253	EXOSC1	98	76.042	ENSPFOG00000006755	exosc1	94	76.042	Poecilia_formosa
ENSCHIG00000015253	EXOSC1	98	76.440	ENSPLAG00000005880	exosc1	98	76.440	Poecilia_latipinna
ENSCHIG00000015253	EXOSC1	98	76.042	ENSPMEG00000015598	exosc1	94	76.042	Poecilia_mexicana
ENSCHIG00000015253	EXOSC1	98	66.146	ENSPREG00000000405	exosc1	93	66.146	Poecilia_reticulata
ENSCHIG00000015253	EXOSC1	100	96.410	ENSPPYG00000002531	EXOSC1	100	96.410	Pongo_abelii
ENSCHIG00000015253	EXOSC1	100	97.436	ENSPCAG00000009135	EXOSC1	100	97.436	Procavia_capensis
ENSCHIG00000015253	EXOSC1	100	91.795	ENSPCOG00000027539	EXOSC1	100	91.795	Propithecus_coquereli
ENSCHIG00000015253	EXOSC1	100	98.462	ENSPVAG00000003372	EXOSC1	100	98.462	Pteropus_vampyrus
ENSCHIG00000015253	EXOSC1	98	80.628	ENSPNYG00000021745	exosc1	98	80.628	Pundamilia_nyererei
ENSCHIG00000015253	EXOSC1	98	81.152	ENSPNAG00000001944	exosc1	98	81.152	Pygocentrus_nattereri
ENSCHIG00000015253	EXOSC1	100	97.949	ENSRNOG00000048708	Exosc1	100	97.949	Rattus_norvegicus
ENSCHIG00000015253	EXOSC1	100	96.923	ENSRBIG00000035618	EXOSC1	100	96.923	Rhinopithecus_bieti
ENSCHIG00000015253	EXOSC1	100	96.923	ENSRROG00000032589	EXOSC1	92	96.923	Rhinopithecus_roxellana
ENSCHIG00000015253	EXOSC1	100	98.462	ENSSBOG00000000359	EXOSC1	100	98.462	Saimiri_boliviensis_boliviensis
ENSCHIG00000015253	EXOSC1	75	95.918	ENSSHAG00000018219	EXOSC1	100	95.918	Sarcophilus_harrisii
ENSCHIG00000015253	EXOSC1	98	82.812	ENSSFOG00015009069	exosc1	99	82.812	Scleropages_formosus
ENSCHIG00000015253	EXOSC1	97	78.421	ENSSFOG00015016289	-	98	78.421	Scleropages_formosus
ENSCHIG00000015253	EXOSC1	98	81.152	ENSSMAG00000003721	exosc1	98	81.152	Scophthalmus_maximus
ENSCHIG00000015253	EXOSC1	98	81.152	ENSSDUG00000002993	exosc1	98	81.152	Seriola_dumerili
ENSCHIG00000015253	EXOSC1	98	81.152	ENSSLDG00000025181	exosc1	98	81.152	Seriola_lalandi_dorsalis
ENSCHIG00000015253	EXOSC1	100	84.103	ENSSARG00000000162	EXOSC1	100	84.103	Sorex_araneus
ENSCHIG00000015253	EXOSC1	99	83.505	ENSSPUG00000012263	EXOSC1	99	83.505	Sphenodon_punctatus
ENSCHIG00000015253	EXOSC1	98	72.251	ENSSPAG00000016792	exosc1	82	72.251	Stegastes_partitus
ENSCHIG00000015253	EXOSC1	100	98.462	ENSSSCG00000010518	EXOSC1	91	98.462	Sus_scrofa
ENSCHIG00000015253	EXOSC1	98	81.250	ENSTGUG00000009692	EXOSC1	99	81.250	Taeniopygia_guttata
ENSCHIG00000015253	EXOSC1	97	74.603	ENSTRUG00000007706	exosc1	98	74.603	Takifugu_rubripes
ENSCHIG00000015253	EXOSC1	97	74.479	ENSTNIG00000014079	exosc1	97	74.479	Tetraodon_nigroviridis
ENSCHIG00000015253	EXOSC1	100	89.744	ENSTBEG00000006011	EXOSC1	100	89.744	Tupaia_belangeri
ENSCHIG00000015253	EXOSC1	94	98.913	ENSTTRG00000009887	EXOSC1	100	98.913	Tursiops_truncatus
ENSCHIG00000015253	EXOSC1	100	82.564	ENSUAMG00000010266	EXOSC1	100	82.564	Ursus_americanus
ENSCHIG00000015253	EXOSC1	100	82.564	ENSUMAG00000022002	EXOSC1	100	82.564	Ursus_maritimus
ENSCHIG00000015253	EXOSC1	100	98.974	ENSVVUG00000023192	EXOSC1	63	98.974	Vulpes_vulpes
ENSCHIG00000015253	EXOSC1	98	79.167	ENSXETG00000003434	exosc1	99	79.167	Xenopus_tropicalis
ENSCHIG00000015253	EXOSC1	62	85.000	ENSXCOG00000014499	exosc1	92	85.000	Xiphophorus_couchianus
ENSCHIG00000015253	EXOSC1	98	66.667	ENSXMAG00000023382	exosc1	93	66.667	Xiphophorus_maculatus