EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000015294 (Gene tree)
Gene ID: 106503505
Gene Symbol: -
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 7852 bases
Position: chr18:123-7974
Accession: 106503505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000014170	Exo_endo_phos	PF03372.23	1.1e-06	1	1
ENSCHIP00000014179	Exo_endo_phos	PF03372.23	1.2e-06	1	1
ENSCHIP00000014187	Exo_endo_phos	PF03372.23	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000021964	-	891	-	ENSCHIP00000014170	296 (aa)	-	UPI000D1970C4
ENSCHIT00000021981	-	993	XM_018061653	ENSCHIP00000014187	330 (aa)	XP_017917142	UPI000D18D162
ENSCHIT00000021973	-	912	-	ENSCHIP00000014179	303 (aa)	-	UPI000D1963CA

Gene Model

Click here to download ENSCHIG00000015294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000015294's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000015294	-	95	87.900	ENSG00000111802	TDP2	92	87.900	Homo_sapiens
ENSCHIG00000015294	-	85	52.362	ENSAPOG00000018379	-	89	52.362	Acanthochromis_polyacanthus
ENSCHIG00000015294	-	95	87.589	ENSAMEG00000010230	TDP2	100	87.589	Ailuropoda_melanoleuca
ENSCHIG00000015294	-	62	52.717	ENSAOCG00000010081	-	79	52.717	Amphiprion_ocellaris
ENSCHIG00000015294	-	85	51.953	ENSAPEG00000004208	-	91	51.953	Amphiprion_percula
ENSCHIG00000015294	-	98	46.075	ENSATEG00000010663	-	94	46.075	Anabas_testudineus
ENSCHIG00000015294	-	95	68.794	ENSACAG00000002332	TDP2	76	68.794	Anolis_carolinensis
ENSCHIG00000015294	-	95	87.500	ENSANAG00000020033	TDP2	78	86.572	Aotus_nancymaae
ENSCHIG00000015294	-	89	53.962	ENSACLG00000016148	tdp2b	94	53.962	Astatotilapia_calliptera
ENSCHIG00000015294	-	97	47.586	ENSACLG00000016174	tdp2b	97	47.586	Astatotilapia_calliptera
ENSCHIG00000015294	-	91	48.529	ENSACLG00000016132	tdp2b	91	48.529	Astatotilapia_calliptera
ENSCHIG00000015294	-	93	58.484	ENSAMXG00000011775	tdp2b	72	58.484	Astyanax_mexicanus
ENSCHIG00000015294	-	94	47.703	ENSAMXG00000036549	tdp2a	92	47.703	Astyanax_mexicanus
ENSCHIG00000015294	-	95	96.786	ENSBTAG00000000365	TDP2	77	96.786	Bos_taurus
ENSCHIG00000015294	-	84	35.547	WBGene00013405	tdpt-1	71	35.075	Caenorhabditis_elegans
ENSCHIG00000015294	-	95	85.000	ENSCJAG00000021963	-	82	81.395	Callithrix_jacchus
ENSCHIG00000015294	-	95	86.121	ENSCJAG00000006074	TDP2	92	86.121	Callithrix_jacchus
ENSCHIG00000015294	-	97	87.847	ENSCAFG00000010428	TDP2	99	87.543	Canis_familiaris
ENSCHIG00000015294	-	97	87.847	ENSCAFG00020009994	TDP2	99	87.543	Canis_lupus_dingo
ENSCHIG00000015294	-	95	87.500	ENSTSYG00000037199	TDP2	90	87.500	Carlito_syrichta
ENSCHIG00000015294	-	95	87.857	ENSCPOG00000006390	TDP2	78	87.857	Cavia_porcellus
ENSCHIG00000015294	-	95	87.544	ENSCCAG00000022734	TDP2	92	87.544	Cebus_capucinus
ENSCHIG00000015294	-	98	85.811	ENSCATG00000022076	TDP2	97	85.811	Cercocebus_atys
ENSCHIG00000015294	-	95	88.214	ENSCLAG00000002072	TDP2	78	88.214	Chinchilla_lanigera
ENSCHIG00000015294	-	95	88.571	ENSCSAG00000007769	TDP2	78	88.571	Chlorocebus_sabaeus
ENSCHIG00000015294	-	92	72.894	ENSCPBG00000006551	TDP2	70	72.894	Chrysemys_picta_bellii
ENSCHIG00000015294	-	98	85.424	ENSCANG00000040122	TDP2	97	85.424	Colobus_angolensis_palliatus
ENSCHIG00000015294	-	95	75.177	ENSCGRG00001000384	Tdp2	78	73.038	Cricetulus_griseus_chok1gshd
ENSCHIG00000015294	-	95	75.357	ENSCGRG00000010250	Tdp2	82	72.945	Cricetulus_griseus_crigri
ENSCHIG00000015294	-	84	59.524	ENSCVAG00000003114	tdp2b	77	55.435	Cyprinodon_variegatus
ENSCHIG00000015294	-	88	48.462	ENSDARG00000069941	tdp2a	58	48.462	Danio_rerio
ENSCHIG00000015294	-	94	56.786	ENSDARG00000035954	tdp2b	73	56.786	Danio_rerio
ENSCHIG00000015294	-	95	85.106	ENSDNOG00000044082	TDP2	76	85.106	Dasypus_novemcinctus
ENSCHIG00000015294	-	95	83.929	ENSETEG00000019096	TDP2	100	83.929	Echinops_telfairi
ENSCHIG00000015294	-	90	53.731	ENSEBUG00000006535	tdp2a	62	53.731	Eptatretus_burgeri
ENSCHIG00000015294	-	95	88.929	ENSEASG00005007656	TDP2	77	88.929	Equus_asinus_asinus
ENSCHIG00000015294	-	95	88.929	ENSECAG00000014264	TDP2	77	88.929	Equus_caballus
ENSCHIG00000015294	-	95	83.214	ENSEEUG00000010776	TDP2	76	83.214	Erinaceus_europaeus
ENSCHIG00000015294	-	93	56.446	ENSELUG00000016449	tdp2b	76	56.446	Esox_lucius
ENSCHIG00000015294	-	96	46.552	ENSELUG00000009321	tdp2a	90	46.233	Esox_lucius
ENSCHIG00000015294	-	95	89.286	ENSFCAG00000025612	TDP2	77	89.286	Felis_catus
ENSCHIG00000015294	-	92	65.568	ENSFALG00000004710	TDP2	80	62.373	Ficedula_albicollis
ENSCHIG00000015294	-	99	83.904	ENSFDAG00000006512	TDP2	99	85.069	Fukomys_damarensis
ENSCHIG00000015294	-	87	49.425	ENSFHEG00000013560	-	89	49.425	Fundulus_heteroclitus
ENSCHIG00000015294	-	95	69.643	ENSGALG00000013637	TDP2	75	69.643	Gallus_gallus
ENSCHIG00000015294	-	98	68.456	ENSGAGG00000002853	TDP2	75	68.456	Gopherus_agassizii
ENSCHIG00000015294	-	98	84.983	ENSGGOG00000014237	TDP2	96	84.983	Gorilla_gorilla
ENSCHIG00000015294	-	90	57.678	ENSHBUG00000002714	tdp2b	73	57.678	Haplochromis_burtoni
ENSCHIG00000015294	-	71	56.459	ENSHBUG00000005421	-	87	56.459	Haplochromis_burtoni
ENSCHIG00000015294	-	95	86.429	ENSHGLG00000008655	TDP2	77	86.429	Heterocephalus_glaber_female
ENSCHIG00000015294	-	95	86.429	ENSHGLG00100019087	TDP2	77	86.429	Heterocephalus_glaber_male
ENSCHIG00000015294	-	93	57.246	ENSIPUG00000013691	tdp2b	79	53.741	Ictalurus_punctatus
ENSCHIG00000015294	-	95	69.643	ENSJJAG00000021685	Tdp2	82	67.808	Jaculus_jaculus
ENSCHIG00000015294	-	86	49.035	ENSKMAG00000015485	-	83	49.035	Kryptolebias_marmoratus
ENSCHIG00000015294	-	95	64.311	ENSLACG00000008852	TDP2	76	64.413	Latimeria_chalumnae
ENSCHIG00000015294	-	95	59.075	ENSLOCG00000005817	tdp2b	99	59.075	Lepisosteus_oculatus
ENSCHIG00000015294	-	97	84.028	ENSLAFG00000002567	TDP2	84	81.667	Loxodonta_africana
ENSCHIG00000015294	-	98	85.473	ENSMFAG00000045296	TDP2	97	85.473	Macaca_fascicularis
ENSCHIG00000015294	-	95	88.214	ENSMMUG00000009803	TDP2	78	88.214	Macaca_mulatta
ENSCHIG00000015294	-	98	85.473	ENSMNEG00000038003	TDP2	97	85.473	Macaca_nemestrina
ENSCHIG00000015294	-	98	85.811	ENSMLEG00000028883	TDP2	97	85.811	Mandrillus_leucophaeus
ENSCHIG00000015294	-	90	56.506	ENSMAMG00000013654	tdp2b	76	55.396	Mastacembelus_armatus
ENSCHIG00000015294	-	90	56.929	ENSMZEG00005003950	tdp2b	78	54.770	Maylandia_zebra
ENSCHIG00000015294	-	91	52.941	ENSMZEG00005004153	tdp2b	95	52.941	Maylandia_zebra
ENSCHIG00000015294	-	93	51.943	ENSMZEG00005004077	tdp2b	96	51.943	Maylandia_zebra
ENSCHIG00000015294	-	91	48.889	ENSMZEG00005004126	tdp2b	90	49.057	Maylandia_zebra
ENSCHIG00000015294	-	97	45.862	ENSMZEG00005004103	tdp2b	97	45.862	Maylandia_zebra
ENSCHIG00000015294	-	82	46.721	ENSMZEG00005003980	-	79	46.721	Maylandia_zebra
ENSCHIG00000015294	-	86	50.781	ENSMZEG00005004055	tdp2b	84	50.781	Maylandia_zebra
ENSCHIG00000015294	-	95	69.643	ENSMGAG00000008014	TDP2	75	69.643	Meleagris_gallopavo
ENSCHIG00000015294	-	95	75.177	ENSMAUG00000014451	Tdp2	78	73.038	Mesocricetus_auratus
ENSCHIG00000015294	-	99	85.666	ENSMICG00000000039	TDP2	99	85.666	Microcebus_murinus
ENSCHIG00000015294	-	95	75.532	ENSMOCG00000002823	Tdp2	78	73.379	Microtus_ochrogaster
ENSCHIG00000015294	-	82	73.967	ENSMODG00000011653	TDP2	73	73.967	Monodelphis_domestica
ENSCHIG00000015294	-	96	47.297	ENSMALG00000005368	-	97	47.297	Monopterus_albus
ENSCHIG00000015294	-	95	75.177	MGP_CAROLIEiJ_G0018354	Tdp2	78	72.881	Mus_caroli
ENSCHIG00000015294	-	95	75.532	ENSMUSG00000035958	Tdp2	78	73.220	Mus_musculus
ENSCHIG00000015294	-	95	75.532	MGP_PahariEiJ_G0019417	Tdp2	78	73.220	Mus_pahari
ENSCHIG00000015294	-	95	75.887	MGP_SPRETEiJ_G0019220	Tdp2	78	73.559	Mus_spretus
ENSCHIG00000015294	-	95	88.571	ENSMPUG00000004516	TDP2	78	88.612	Mustela_putorius_furo
ENSCHIG00000015294	-	95	81.495	ENSMLUG00000013506	TDP2	77	81.495	Myotis_lucifugus
ENSCHIG00000015294	-	97	68.641	ENSNGAG00000001375	Tdp2	78	68.151	Nannospalax_galili
ENSCHIG00000015294	-	95	88.612	ENSNLEG00000002447	TDP2	89	88.612	Nomascus_leucogenys
ENSCHIG00000015294	-	95	86.879	ENSOPRG00000016299	TDP2	81	86.879	Ochotona_princeps
ENSCHIG00000015294	-	98	86.159	ENSODEG00000014018	TDP2	98	86.159	Octodon_degus
ENSCHIG00000015294	-	95	88.571	ENSOCUG00000013773	TDP2	96	75.287	Oryctolagus_cuniculus
ENSCHIG00000015294	-	87	48.462	ENSORLG00000001661	-	95	48.462	Oryzias_latipes
ENSCHIG00000015294	-	91	45.357	ENSORLG00020004634	-	95	48.462	Oryzias_latipes_hni
ENSCHIG00000015294	-	88	42.748	ENSORLG00015008190	-	94	42.748	Oryzias_latipes_hsok
ENSCHIG00000015294	-	88	48.462	ENSOMEG00000015899	-	92	48.790	Oryzias_melastigma
ENSCHIG00000015294	-	95	84.286	ENSOGAG00000025303	TDP2	76	84.286	Otolemur_garnettii
ENSCHIG00000015294	-	98	84.983	ENSPPAG00000029023	TDP2	96	84.983	Pan_paniscus
ENSCHIG00000015294	-	95	89.286	ENSPPRG00000015398	TDP2	77	89.286	Panthera_pardus
ENSCHIG00000015294	-	95	89.643	ENSPTIG00000018574	TDP2	96	89.362	Panthera_tigris_altaica
ENSCHIG00000015294	-	98	84.983	ENSPTRG00000017778	TDP2	96	84.983	Pan_troglodytes
ENSCHIG00000015294	-	98	85.135	ENSPANG00000017590	TDP2	97	85.135	Papio_anubis
ENSCHIG00000015294	-	95	55.357	ENSPKIG00000006483	tdp2b	79	54.483	Paramormyrops_kingsleyae
ENSCHIG00000015294	-	92	72.161	ENSPSIG00000004948	TDP2	97	70.423	Pelodiscus_sinensis
ENSCHIG00000015294	-	95	75.887	ENSPEMG00000001788	Tdp2	78	73.720	Peromyscus_maniculatus_bairdii
ENSCHIG00000015294	-	87	46.886	ENSPMAG00000001570	tdp2b	99	46.886	Petromyzon_marinus
ENSCHIG00000015294	-	96	72.183	ENSPCIG00000007316	TDP2	74	72.183	Phascolarctos_cinereus
ENSCHIG00000015294	-	92	44.928	ENSPFOG00000017990	-	98	44.928	Poecilia_formosa
ENSCHIG00000015294	-	83	47.200	ENSPLAG00000019439	-	79	47.200	Poecilia_latipinna
ENSCHIG00000015294	-	83	48.000	ENSPMEG00000010824	-	84	48.000	Poecilia_mexicana
ENSCHIG00000015294	-	95	88.214	ENSPPYG00000016282	TDP2	71	88.214	Pongo_abelii
ENSCHIG00000015294	-	98	85.862	ENSPCOG00000021415	TDP2	98	88.214	Propithecus_coquereli
ENSCHIG00000015294	-	91	49.306	ENSPNYG00000011504	tdp2b	93	49.306	Pundamilia_nyererei
ENSCHIG00000015294	-	70	44.175	ENSPNYG00000001944	-	85	44.175	Pundamilia_nyererei
ENSCHIG00000015294	-	90	56.180	ENSPNYG00000011532	tdp2b	78	54.064	Pundamilia_nyererei
ENSCHIG00000015294	-	92	48.070	ENSPNAG00000022162	tdp2a	80	44.937	Pygocentrus_nattereri
ENSCHIG00000015294	-	95	74.286	ENSRNOG00000018246	Tdp2	75	74.286	Rattus_norvegicus
ENSCHIG00000015294	-	98	85.424	ENSRBIG00000037119	TDP2	97	85.424	Rhinopithecus_bieti
ENSCHIG00000015294	-	98	85.085	ENSRROG00000005025	TDP2	97	85.085	Rhinopithecus_roxellana
ENSCHIG00000015294	-	95	87.143	ENSSBOG00000028734	TDP2	94	85.813	Saimiri_boliviensis_boliviensis
ENSCHIG00000015294	-	96	73.333	ENSSHAG00000002506	TDP2	76	73.333	Sarcophilus_harrisii
ENSCHIG00000015294	-	94	51.575	ENSSFOG00015011322	-	72	51.575	Scleropages_formosus
ENSCHIG00000015294	-	95	80.000	ENSSARG00000013547	TDP2	100	80.000	Sorex_araneus
ENSCHIG00000015294	-	95	67.474	ENSSPUG00000008288	TDP2	79	67.474	Sphenodon_punctatus
ENSCHIG00000015294	-	95	93.214	ENSSSCG00000001092	TDP2	77	93.214	Sus_scrofa
ENSCHIG00000015294	-	88	68.462	ENSTGUG00000009035	TDP2	99	68.462	Taeniopygia_guttata
ENSCHIG00000015294	-	92	54.745	ENSTRUG00000014347	tdp2b	76	54.745	Takifugu_rubripes
ENSCHIG00000015294	-	89	49.624	ENSTRUG00000012218	-	92	49.624	Takifugu_rubripes
ENSCHIG00000015294	-	92	56.364	ENSTNIG00000017792	tdp2b	79	54.007	Tetraodon_nigroviridis
ENSCHIG00000015294	-	87	51.341	ENSTNIG00000010260	TDP2	99	51.341	Tetraodon_nigroviridis
ENSCHIG00000015294	-	95	90.714	ENSTTRG00000016376	TDP2	77	90.714	Tursiops_truncatus
ENSCHIG00000015294	-	95	87.544	ENSUAMG00000025939	TDP2	80	87.544	Ursus_americanus
ENSCHIG00000015294	-	98	86.644	ENSUMAG00000020111	TDP2	97	86.644	Ursus_maritimus
ENSCHIG00000015294	-	95	69.395	ENSXETG00000014826	tdp2	75	69.395	Xenopus_tropicalis
ENSCHIG00000015294	-	83	48.207	ENSXCOG00000010778	-	69	48.207	Xiphophorus_couchianus
ENSCHIG00000015294	-	83	48.207	ENSXMAG00000022252	-	72	48.207	Xiphophorus_maculatus